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Deep Learning · Generative Models and Autoencoders

Rajalaxmi Rajagopalan, Debottam Dutta, Yu-Lin Wei, Romit Roy Choudhury

Imagine Alice has a specific image $x^\ast$ in her mind, say, the view of the street in which she grew up during her childhood. To generate that exact image, she guides a generative model with multiple rounds of prompting and arrives at an image $x^{p*}$. Although $x^{p*}$ is reasonably close to $x^\ast$, Alice finds it difficult to close that gap using language prompts. This paper aims to narrow this gap by observing that even after language has reached its limits, humans can still tell when a new image $x^+$ is closer to $x^\ast$ than $x^{p*}$. Leveraging this observation, we develop **MultiBO** (Multi-Choice Preferential Bayesian Optimization) that carefully generates $K$ new images as a function of $x^{p*}$, gets preferential feedback from the user, uses the feedback to guide the diffusion model, and ultimately generates a new set of $K$ images. We show that within $B$ rounds of user feedback, it is possible to arrive much closer to $x^\ast$, even though the generative model has no information about $x^\ast$. Qualitative scores from $30$ users, combined with quantitative metrics compared across $5$ baselines, show promising results, suggesting that multi-choice feedback from humans can be effectively harnessed for personalized image generation.

Sen Ye, Jianning Pei, Mengde Xu, Shuyang Gu, Chunyu Wang, Liwei Wang, Han Hu

Most visual generative models compress images into a latent space before applying diffusion or autoregressive modelling. Yet, existing approaches such as VAEs and foundation model aligned encoders implicitly constrain the latent space without explicitly shaping its distribution, making it unclear which types of distributions are optimal for modeling. We introduce **Distribution-Matching VAE** (**DMVAE**), which explicitly aligns the encoder’s latent distribution with an arbitrary reference distribution via a distribution matching constraint. This generalizes beyond the Gaussian prior of conventional VAEs, enabling alignment with distributions derived from self-supervised features, diffusion noise, or other prior distributions. With DMVAE, we can systematically investigate which latent distributions are more conducive to modeling, and we find that SSL-derived distributions provide an excellent balance between reconstruction fidelity and modeling efficiency, reaching a gFID of 3.2 on ImageNet with only 64 training epochs. Our results suggest that choosing a suitable latent distribution structure (achieved via distribution-level alignment), rather than relying on fixed priors, is key to bridging the gap between easy-to-model latents and high-fidelity image synthesis.

Deep Learning · Generative Models and Autoencoders

Zixun Xia, Shuyu Guo, Boqian Li, jian Yang, Kai Wang, Yaxing Wang

Text-to-image models have advanced high-fidelity content generation, but their inability to maintain subject consistency hampers realistic applications. Existing training-based methods rely on heavy computation and large datasets; while training-free approaches demand excessive memory or complex auxiliary modules. In this paper, we first reveal a key property overlooked in prior works that the identity-relevant signals, termed Identity-Preserving Embeddings (*IPemb*), are implicitly encoded in textual embeddings of frame prompts. To address the consistent T2I generation with the *IPemb* embedding, we propose Boost Identity-Preserving Embedding (*BIPE*), a training-free yet plug-and-play framework that explicitly extracts and enhances the *IPemb*. Its core innovations are two complementary techniques: First, Adaptive Singular-Value Rescaling (*adaSVR*) applies singular-value decomposition to the joint embedding matrix of all frame prompts, amplifying identity-centric components while suppressing frame-specific noise. Second, Union Key (*UniK*) further reinforces consistency by aligning the T2I backbone’s image-text attention across the entire generation sequence. Experiments on the *ConsiStory+* benchmark demonstrate *BIPE* outperforms existing methods in both qualitative and quantitative metrics. To address the gap in evaluating a broader range of scenarios with diversified prompt templates, we introduce a *DiverStory* benchmark to further confirm our scalability.

Deep Learning · Generative Models and Autoencoders

Liyu Zhang, Kehan Li, Tao Zhou, Zeyi Huang, Chao LI, Jiming Chen

Reward feedback learning (ReFL) is effective for both text-to-image (T2I) and text-to-video (T2V) generation with image reward models (RMs). However, image RMs are misaligned with temporal objectives of T2V, motivating ReFL with video reward models. Nevertheless, directly deploying video RMs is impractical due to their large parameter size and the prohibitive cost of memory. To address this, we propose VELR: an efficient framework that employs ensemble latent reward models (LRMs) to predict rewards directly in latent space, bypassing expensive backpropagation through VAE decoders and video RMs. Specifically, we introduce the ensemble technique for the LRM, which enhances capacity, quantifies uncertainty, and mitigates reward hacking. VELR achieves a reduction of up to 150GB in memory, requiring as little as 12.4% of the memory compared to standard ReFL. Experiments on OpenSora-1.2, CogVideoX-1.5, and Wan-2.1 with large-scale video RMs demonstrate that VELR achieves comparable performance as standard ReFL and enables efficient and robust video RM-based ReFL at scales previously unattainable.

Tianhao Zhao, Youjia Zhang, Hang Long, Jinshen Zhang, Wenbing Li, Yang Yang, Gongbo Zhang, Jozef Hladký, Matthias Nießner, Wei Yang

In this paper, we introduce LATO, a novel topology-preserving latent representation that enables scalable, flow matching-based synthesis of explicit 3D meshes. LATO represents a mesh as a Vertex Displacement Field (VDF) anchored on surface, incorporating a sparse voxel Variational Autoencoder (VAE) to compress this explicit signal into a structured, topology-aware voxel latent. To decapsulate the mesh, the VAE decoder progressively subdivides and prunes latent voxels to instantiate precise vertex locations. In the end, a dedicated connection head queries the voxel latent to predict edge connectivity between vertex pairs directly, allowing mesh topology to be recovered without isosurface extraction or heuristic meshing. For generative modeling, LATO adopts a two-stage flow matching process, first synthesizing the structure voxels and subsequently refining the voxel-wise topology features. Compared to prior isosurface/triangle-based diffusion models and autoregressive generation approaches, LATO generates meshes with complex geometry, well-formed topology while being highly efficient in inference.

Applications · Chemistry, Physics, and Earth Sciences

Dexiong Chen, Andrei Manolache, Mathias Niepert, Karsten Borgwardt

Classifying protein topology is essential for deciphering biological function, but progress is held back by the lack of large-scale benchmarks that avoid duplicates and by models that do not scale well. We introduce TEDBench, a large-scale, non-redundant benchmark for protein fold classification constructed from the Encyclopedia of Domains (TED) and Foldseek-clustered AlphaFold structures. We show that on TEDBench, current protein representation learning methods either require very large models or fail to deliver strong performance. To address this challenge, we propose Masked Invariant Autoencoders (MiAE), a self-supervised framework for protein structure representation learning. MiAE uses an extremely high masking ratio of up to 90% with an $\mathrm{SE(3)}$-invariant encoder and a lightweight decoder that reconstructs backbone coordinates from the latent representation and mask tokens. MiAE scales well and outperforms supervised counterparts and state-of-the-art baselines on TEDBench, establishing a strong recipe for protein fold classification. To test transfer beyond AlphaFold structures, we further benchmark on a curated dataset from experimental structures of CATH 4.4. We will release TEDBench and model checkpoints.

Deep Learning · Generative Models and Autoencoders

Binxu Wang, Jacob A Zavatone-Veth, Cengiz Pehlevan

Diffusion models trained on different, non-overlapping subsets of a dataset often produce strikingly similar outputs when given the same noise seed. We trace this consistency to a simple linear effect: the shared Gaussian statistics across splits already predict much of the generated images. To formalize this, we develop a random matrix theory (RMT) framework that quantifies how finite datasets shape the expectation and variance of the learned denoiser and sampling map in the linear setting. For expectations, sampling variability acts as a renormalization of the noise level through a self-consistent relation $\sigma^2\to\kappa(\sigma^2)$, explaining why limited data overshrink low-variance directions and pull samples toward the dataset mean. For fluctuations, our variance formulas reveal three key factors behind cross-split disagreement: \textit{anisotropy} across eigenmodes, \textit{inhomogeneity} across inputs, and overall scaling with dataset size. Extending deterministic-equivalence tools to fractional matrix powers further allows us to analyze entire sampling trajectories. The theory sharply predicts the behavior of linear diffusion models, and we validate its predictions on UNet and DiT architectures in their non-memorization regime, identifying where and how samples deviates across training data split. This provides a principled baseline for reproducibility in diffusion training, linking spectral properties of data to the stability of generative outputs.

Applications · Robotics

Kunyun Wang, Yuhang Zheng, Jieru Zhao, Yupeng Zheng, Wenchao Ding

Modern robotic policies increasingly rely on action chunking to execute complex tasks in the physical world. While action chunking improves temporal consistency at moderate action frequencies, it becomes insufficient when the action frequency is further increased (e.g., to 60~Hz). At such high frequencies, policies often fail to generate actions that are both temporally smooth and spatially consistent. We address this challenge by shifting high-frequency action learning from the action space to a latent space with variational autoencoder (VAE). This formulation significantly improves both temporal and spatial consistency of high-frequency control. To enable smooth real-time execution, we further introduce Reuse-then-Refine, a chunk-level refine strategy that improves continuity between adjacent action chunks under asynchronous inference. As a result, robots controlled by our policy can execute complex contact-rich tasks continuously, with less pauses and jerky motions. Experiments on three real-world contact-rich robotic tasks show that our approach consistently completes tasks with smooth motions.

Deep Learning · Generative Models and Autoencoders

Brett Levac, Jon Tamir, Marcelo Pereyra, Julián Tachella

Diffusion models (DMs) are a powerful framework for image generation and restoration. However, existing DMs are primarily trained in a supervised manner by using a large corpus of clean images. This poses fundamental challenges in many real-world scenarios, where acquiring noise-free data is hard or infeasible. While some methods are capable of training DMs using noisy data, they are effective only when the amount of noise is very mild or when additional noise-free data is available. In addition, existing methods for training DMs from incomplete measurements require access to multiple complementary acquisition processes, a significant practical limitation. Here we introduce the first approach for learning DMs for image restoration using only noisy measurement data from a single operator. First, we show that DMs, and more broadly minimum mean squared error denoisers, exhibit a weak form of scale equivariance linking rescaling in signal amplitude to changes in noise intensity. We then leverage this theoretical insight to develop a denoising score-matching strategy that generalizes robustly to noise levels below the training data, thereby enabling the learning of DMs from noisy measurements. For problems involving measurements both noisy and incomplete, we integrate our method with equivariant imaging, a complementary self-supervised learning framework that exploits the inherent invariants of imaging problems. This allows training DMs for image restoration from single-operator noisy measurements. We validate the effectiveness of our approach through extensive experiments on image denoising, demosaicing, inpainting, and MRI reconstruction along with comparisons with the state of the art.

Deep Learning · Generative Models and Autoencoders

Xiaofeng Lin, Seungbae Kim, Zhuoya Li, Zachary DeSoto, Charles Fleming, Guang Cheng

Deep generative models can help with data scarcity and privacy by producing synthetic training data, but they struggle in low-data, imbalanced tabular settings to fully learn the complex data distribution. We argue that striving for the full joint distribution could be overkill; for greater data efficiency, models should prioritize learning the conditional distribution $P(y\mid \bm{X})$, as suggested by recent theoretical analysis. Therefore, we overcome this limitation with \textbf{ReTabSyn}, a \textbf{Re}inforced \textbf{Tab}ular \textbf{Syn}thesis pipeline that provides direct feedback on feature correlation preservation during synthesizer training. This objective encourages the generator to prioritize the most useful predictive signals when training data is limited, thereby strengthening downstream model utility. We empirically fine-tune a language model-based generator using this approach, and across benchmarks with small sample sizes, class imbalance, and distribution shift, ReTabSyn consistently outperforms state-of-the-art baselines. Moreover, our approach can be readily extended to control various aspects of synthetic tabular data, such as applying expert-specified constraints on generated observations.

Deep Learning · Generative Models and Autoencoders

Kaiyuan Deng, Bo Hui, Gen Li, Jie Ji, Minghai Qin, Geng Yuan, Xiaolong Ma

The widespread adoption of text-to-image (T2I) diffusion models has raised concerns about their potential to generate copyrighted, inappropriate, or sensitive imagery learned from massive training corpora. As a practical solution, machine unlearning aims to selectively erase unwanted concepts from a pre-trained model without retraining from scratch. While most existing methods are effective for single-concept unlearning, they often struggle in real-world scenarios that require removing multiple concepts, since extending them to this setting is both non-trivial and problematic, causing significant challenges in unlearning effectiveness, generation quality, and sensitivity to hyperparameters and datasets. In this paper, we take a unique perspective on multi-concept unlearning by leveraging model sparsity and propose the Forget It All (FIA) framework. FIA first introduces Contrastive Concept Saliency to quantify each weight connection’s contribution to a target concept. It then identifies Concept-Sensitive Neurons by combining temporal and spatial information, ensuring that only neurons consistently responsive to the target concept are selected. Finally, FIA constructs masks from the identified neurons and fuses them into a unified multi-concept mask, where Concept-Agnostic Neurons that broadly support general content generation are preserved while concept-specific neurons are pruned to remove the targets. FIA is training-free and requires only minimal hyperparameter tuning for new tasks, thereby promoting a plug-and-play paradigm. Extensive experiments across three distinct unlearning tasks demonstrate that FIA achieves more reliable multi-concept unlearning, improving forgetting effectiveness while maintaining semantic fidelity and image quality.

Deep Learning · Generative Models and Autoencoders

Xuehui Yu, Fucheng Cai, Meiyi Wang, Xiaopeng Fan, Harold Soh

Inference-time guided sampling steers state-of-the-art diffusion and flow models without fine-tuning by interpreting the generation process as a controllable trajectory. This provides a simple and flexible way to inject external constraints (e.g., cost functions or pre-trained verifiers) for controlled generation. However, existing methods often fail when composing multiple constraints simultaneously, which leads to deviations from the true data manifold. In this work, we identify root causes of this off-manifold drift and find that local errors scale severely with multiple guidance misalignment. Building on these findings, we propose Conflict-Aware Additive Guidance ($g^\text{car}$), a lightweight and learnable method, which actively rectifies off-manifold drift by dynamically detecting and resolving gradient conflicts. We validate $g^\text{car}$ across diverse domains, ranging from synthetic datasets and image editing to generative decision-making for planning and control. Our results demonstrate that $g^\text{car}$ effectively rectifies off-manifold drift, surpassing baselines in generation fidelity while using light compute. Code is available at Anonymous Link.

Deep Learning · Generative Models and Autoencoders

Zepeng Zhang, Aref Einizade, Jhony H. Giraldo, Olga Fink

Missing data is a common challenge in spatiotemporal systems, arising in applications such as air quality monitoring and urban traffic management. Traditional machine learning approaches, like recurrent and graph neural networks, rely on iterative propagation, which tends to accumulate errors over time and space. Recent diffusion-based methods mitigate error propagation but require iterative sampling and often depend on problem-agnostic Gaussian priors, limiting both efficiency and effectiveness. To address these limitations, we propose GiFlow, a Graph-Informed Flow Matching framework for spatiotemporal imputation. GiFlow replaces the typical Gaussian prior with a graph-informed prior constructed via spatiotemporal filtering of observable signals, which better aligns the source distribution to the target and thereby simplifies the generation trajectory. The flow field is parameterized by a hybrid vector field model that integrates spatial attention, temporal attention, and spatiotemporal propagation, enabling joint modeling of spatial and temporal dependencies. Unlike diffusion models, GiFlow is trained via direct regression and supports deterministic, few-step generation at inference. Extensive experiments on both synthetic and real-world datasets with different missing patterns and missing rates demonstrate that the proposed GiFlow outperforms the state-of-the-art approaches in spatiotemporal imputation.

Deep Learning · Generative Models and Autoencoders

Xianglu Wang, Bangxian Han, Hu Ding

Diffusion models have achieved state-of-the-art performance in image generation tasks. However, training powerful diffusion models remains time-consuming, which limits their practical deployment. In this paper, we revisit the learning dynamics of diffusion models through the lens of *spectral bias*, a phenomenon in which deep neural networks prioritize learning low-frequency modes. Through an empirical analysis of diffusion training, we observe that diffusion models exhibit a **dual** spectral bias. First, over training iterations, they fit low-frequency components earlier than high-frequency details. Second, along the diffusion timesteps, early denoising steps mainly reconstruct coarse low-frequency content, while high-frequency details emerge in later steps. Motivated by this observation, we propose Frequency-aware Patch Selection **(FaPS)**, a general and fast training method for diffusion models that can be applied to both UNet and DiT backbones. Specifically, FaPS introduces a *frequency-aware gating* that adaptively selects image patches based on their frequency information and focuses computation only on the selected patches. Since the selection decisions are discrete and thus non-differentiable, we model the gating as a stochastic policy network and optimize it end-to-end using a policy gradient method. Our experiments demonstrate that FaPS achieves up to $\mathbf{3}\times$ faster training while maintaining comparable or superior generation quality, and improves the performance of diffusion models in limited-data settings.

Deep Learning · Generative Models and Autoencoders

Subham Sekhar Sahoo, Zhihan Yang, Yash Akhauri, Johnna Liu, Deepansha Singh, Zhoujun Cheng, Zhengzhong Liu, Eric Xing, John Thickstun, Arash Vahdat

Diffusion-based language models offer a compelling alternative to autoregressive (AR) models by enabling parallel and controllable generation. Within this family, Masked Diffusion Models (MDMs) currently perform best but still underperform AR models in perplexity and lack key inference-time efficiency features, most notably KV caching. We introduce Eso-LMs, a new family of models that fuses AR and MDM paradigms, smoothly interpolating between their perplexities while overcoming their respective limitations. Unlike prior work, which uses transformers with bidirectional attention as MDM denoisers, we exploit the connection between MDMs and Any-Order autoregressive models and adopt causal attention. This design lets us compute the exact likelihood of MDMs for the first time and, crucially, enables us to introduce KV caching for MDMs while preserving parallel generation for the first time, significantly improving inference efficiency. Combined with an optimized sampling schedule, Eso-LMs achieves a new state of the art on the speed-quality Pareto frontier for unconditional generation. On long contexts, it yields 14−65× faster inference than standard MDMs and 3−4× faster inference than prior semi-autoregressive approaches.

Deep Learning · Generative Models and Autoencoders

Desong Yang, Mang Ye

With recent advancements in large-scale pre-trained text-to-image (T2I) models, training-free image editing methods have demonstrated remarkable success. Typically, these methods involve adding noise to a clean image via an inversion process, followed by separate denoising steps for the reconstruction and editing paths during the forward process. However, since the reconstruction path is approximated using noisy latents from mismatched timesteps, existing methods inevitably suffer from accumulated drift, which fundamentally limits reconstruction fidelity. To address this challenge, we systematically analyze the inversion process within the flow transformer and propose DirectEdit, a simple yet efficient editing method that eliminates the inherent reconstruction error without introducing additional neural function evaluations (NFEs). Unlike most prior works that attempt to rectify the inversion path, DirectEdit focuses on directly aligning the forward paths, enabling precise reconstruction and reliable feature sharing. Furthermore, we introduce a preservation mechanism based on attention feature injection and multi-branch mask-guided noise blending, which effectively balances fidelity and editability. Extensive experiments across diverse scenarios demonstrate that DirectEdit achieves efficient and accurate image editing, delivering superior performance that outperforms state-of-the-art methods. Code will be released.

Deep Learning · Other Representation Learning

Kenny Peng, Rajiv Movva, Jon Kleinberg, Emma Pierson, Nikhil Garg

While sparse autoencoders (SAEs) have generated significant excitement, a series of negative results have added to skepticism about their usefulness. Here, we establish a conceptual distinction that reconciles competing narratives surrounding SAEs. We argue that even if SAEs may be less effective for *acting on known concepts*, SAEs are especially powerful tools for *discovering unknown concepts*. This distinction separates existing negative results from positive results, and suggests several classes of SAE applications. Specifically, we outline use cases for SAEs in (i) ML interpretability, explainability, fairness, auditing, and safety, and (ii) social and health sciences.

Deep Learning · Generative Models and Autoencoders

Mashrur M. Morshed, Vishnu Boddeti

The physical world is fundamentally compositional, yet empirical data are often fragmented across decentralized silos that cannot be aggregated due to privacy, legal, or economic constraints. Such scenarios pose a fundamental challenge for generative modeling: learning models that collectively cover the union of these sources while enabling compositional generalization when the factors required for composition are distributed across isolated data sources. We introduce Decentralized Compositional Flow Matching (DCFM), a framework for learning generative models from decentralized private data without exchanging raw samples. DCFM enforces structural constraints that induce conditional independence across the global set of generative factors. As a result, DCFM allows novel combinations to emerge through interactions across peers, even when no single data source contains sufficient information to support composition on its own. Empirically, DCFM substantially outperforms federated learning and mixture-of-experts baselines across conditional image generation, robotic spatial planning and medical attribute co-occurrence modeling.

Deep Learning · Generative Models and Autoencoders

Zixuan Zhang, Hengyu Fu, Zhuoran Yang, Mengdi Wang, Tuo Zhao, Minshuo Chen

Discrete diffusion models have recently emerged as a compelling alternative for language generation, enabling efficient non-autoregressive sampling while achieving strong empirical performance. A key design choice in discrete diffusion---absent in most continuous diffusion formulations---is the forward corruption kernel, with masked/absorbing corruption now dominating practice. Despite this empirical preference, there is limited statistical theory explaining when and why masking should outperform alternative kernels such as uniform replacement. In this paper, we take a step toward closing this gap from a statistical learning perspective. Our analysis establishes generalization bounds and, through an explicit comparison across different forward corruption kernels, reveals a central advantage of masking: it scales with the effective data support rather than the full ambient state space, thereby mitigating the curse of state space cardinality. We further derive structure-aware refinements that capture how concentration and sparsity in real sequential data sharpen the sample complexities. Together, these results offer a principled explanation for the empirical strength of masked diffusion and provide guidance for forward-kernel design in discrete generative modeling.

Deep Learning · Generative Models and Autoencoders

Ying Li, Zefang Wang, Zhaode Wang, Zhiwen Chen, chengfei lv, Huan Wang

Scaling up visual autoregressive models improves generation quality but incurs substantial inference costs. Mixture-of-Experts (MoE) architectures mitigate this issue through sparse activation and have proven effective in large language models. However, training MoE models from scratch remains prohibitively expensive, and dense-to-MoE conversion for visual autoregressive models is still underexplored. To enable *low-cost and high-quality dense-to-MoE conversion*, we propose **Prism-MoE**, an efficient framework for transforming pretrained dense visual autoregressive models into sparse MoE models. Prism-MoE consists of two key components. First, we introduce trajectory-consistent Initialization, which formulates expert initialization as a principled decomposition problem and preserves the generation trajectory of pretrained models. Second, we propose a confidence-adaptive sparse fine-tuning framework that aligns expert specialization with the information density of visual tokens via confidence-aware routing supervision. Experiments show that Prism-MoE achieves dense-to-MoE conversion with less than **10\%** of the standard training budget, while maintaining generation quality comparable to dense baselines with only **37.5\%** active parameters.