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Miscellaneous Aspects of Machine Learning · Representation Learning

Yivan Zhang, Masashi Sugiyama

Disentangling the explanatory factors in complex data is a promising approach for generalizable and data-efficient representation learning. While a variety of quantitative metrics for learning and evaluating disentangled representations have been proposed, it remains unclear what properties these metrics truly quantify. In this work, we establish algebraic relationships between logical definitions and quantitative metrics to derive theoretically grounded disentanglement metrics. Concretely, we introduce a compositional approach for converting a higher-order predicate into a real-valued quantity by replacing (i) equality with a strict premetric, (ii) the Heyting algebra of binary truth values with a quantale of continuous values, and (iii) quantifiers with aggregators. The metrics induced by logical definitions have strong theoretical guarantees, and some of them are easily differentiable and can be used as learning objectives directly. Finally, we empirically demonstrate the effectiveness of the proposed metrics by isolating different aspects of disentangled representations.

Miscellaneous Aspects of Machine Learning · Kernel methods

Albert Gong, Kyuseong Choi, Raaz Dwivedi

The kernel thinning algorithm of Dwivedi & Mackey (2024) provides a better-than-i.i.d. compression of a generic set of points. By generating high-fidelity coresets of size significantly smaller than the input points, KT is known to speed up unsupervised tasks like Monte Carlo integration, uncertainty quantification, and non-parametric hypothesis testing, with minimal loss in statistical accuracy. In this work, we generalize the KT algorithm to speed up supervised learning problems involving kernel methods. Specifically, we combine two classical algorithms---Nadaraya-Watson (NW) regression or kernel smoothing, and kernel ridge regression (KRR)---with KT to provide a quadratic speed-up in both training and inference times. We show how distribution compression with KT in each setting reduces to constructing an appropriate kernel, and introduce the Kernel-Thinned NW and Kernel-Thinned KRR estimators. We prove that KT-based regression estimators enjoy significantly superior computational efficiency over the full-data estimators and improved statistical efficiency over i.i.d. subsampling of the training data. En route, we also provide a novel multiplicative error guarantee for compressing with KT. We validate our design choices with both simulations and real data experiments.

Miscellaneous Aspects of Machine Learning · General Machine Learning Techniques

HaoChuan Xu, Ninh Pham

We present sDBSCAN, a scalable density-based clustering algorithm in high dimensions with cosine distance. sDBSCAN leverages recent advancements in random projections given a significantly large number of random vectors to quickly identify core points and their neighborhoods, the primary hurdle of density-based clustering. Theoretically, sDBSCAN preserves the DBSCAN’s clustering structure under mild conditions with high probability. To facilitate sDBSCAN, we present sOPTICS, a scalable visual tool to guide the parameter setting of sDBSCAN. We also extend sDBSCAN and sOPTICS to L2, L1, χ2, and Jensen-Shannon distances via random kernel features. Empirically, sDBSCAN is significantly faster and provides higher accuracy than competitive DBSCAN variants on real-world million-point data sets. On these data sets, sDBSCAN and sOPTICS run in a few minutes, while the scikit-learn counterparts and other clustering competitors demand several hours orcannot run on our hardware due to memory constraints. Our code is available at https://github.com/NinhPham/sDbscan.

Miscellaneous Aspects of Machine Learning · Transfer, Multitask and Meta-learning

Viet Hoang Phan, Tung Lam Tran, Quyen Tran, Trung Le

Prior Unsupervised Domain Adaptation (UDA) methods often aim to train a domain-invariant feature extractor, which may hinder the model from learning sufficiently discriminative features. To tackle this, a line of works based on prompt learning leverages the power of large-scale pre-trained vision-language models to learn both domain-invariant and specific features through a set of domain-agnostic and domain-specific learnable prompts. Those studies typically enforce invariant constraints on representation, output, or prompt space to learn such prompts. Differently, we cast UDA as a multiple-objective optimization problem in which each objective is represented by a domain loss. Under this new framework, we propose aligning per-objective gradients to foster consensus between them. Additionally, to prevent potential overfitting when fine-tuning this deep learning architecture, we penalize the norm of these gradients. To achieve these goals, we devise a practical gradient update procedure that can work under both single-source and multi-source UDA. Empirically, our method consistently surpasses other vision language model adaptation methods by a large margin on a wide range of benchmarks. The implementation is available at https://github.com/VietHoang1512/PGA.

Miscellaneous Aspects of Machine Learning · Transfer, Multitask and Meta-learning

Fei Zhou, Peng Wang, Lei Zhang, Zhenghua Chen, Wei Wei, Chen Ding, Guosheng Lin, Yanning Zhang

Meta-learning offers a promising avenue for few-shot learning (FSL), enabling models to glean a generalizable feature embedding through episodic training on synthetic FSL tasks in a source domain. Yet, in practical scenarios where the target task diverges from that in the source domain, meta-learning based method is susceptible to over-fitting. To overcome this, we introduce a novel framework, Meta-Exploiting Frequency Prior for Cross-Domain Few-Shot Learning, which is crafted to comprehensively exploit the cross-domain transferable image prior that each image can be decomposed into complementary low-frequency content details and high-frequency robust structural characteristics. Motivated by this insight, we propose to decompose each query image into its high-frequency and low-frequency components, and parallel incorporate them into the feature embedding network to enhance the final category prediction. More importantly, we introduce a feature reconstruction prior and a prediction consistency prior to separately encourage the consistency of the intermediate feature as well as the final category prediction between the original query image and its decomposed frequency components. This allows for collectively guiding the network's meta-learning process with the aim of learning generalizable image feature embeddings, while not introducing any extra computational cost in the inference phase. Our framework establishes new state-of-the-art results on multiple cross-domain few-shot learning benchmarks.

Miscellaneous Aspects of Machine Learning · Transfer, Multitask and Meta-learning

Duo Wang, Yuan Zuo, Fengzhi Li, Junjie Wu

Zero-shot graph machine learning, especially with graph neural networks (GNNs), has garnered significant interest due to the challenge of scarce labeled data. While methods like self-supervised learning and graph prompt learning have been extensively explored, they often rely on fine-tuning with task-specific labels, limiting their effectiveness in zero-shot scenarios. Inspired by the zero-shot capabilities of instruction-fine-tuned large language models (LLMs), we introduce a novel framework named Token Embedding-Aligned Graph Language Model (TEA-GLM) that leverages LLMs as cross-dataset and cross-task zero-shot learners for graph machine learning. Concretely, we pretrain a GNN, aligning its representations with token embeddings of an LLM. We then train a linear projector that transforms the GNN's representations into a fixed number of graph token embeddings without tuning the LLM. A unified instruction is designed for various graph tasks at different levels, such as node classification (node-level) and link prediction (edge-level). These design choices collectively enhance our method's effectiveness in zero-shot learning, setting it apart from existing methods. Experiments show that our graph token embeddings help the LLM predictor achieve state-of-the-art performance on unseen datasets and tasks compared to other methods using LLMs as predictors. Our code is available at https://github.com/W-rudder/TEA-GLM.

Miscellaneous Aspects of Machine Learning · Transfer, Multitask and Meta-learning

Zhenyi Lu, Chenghao Fan, Wei Wei, Xiaoye Qu, Dangyang Chen, Yu Cheng

In the era of large language models, model merging is a promising way to combine multiple task-specific models into a single multitask model without extra training. However, two challenges remain: (a) interference between different models and (b) heterogeneous data during testing. Traditional model merging methods often show significant performance gaps compared to fine-tuned models due to these issues. Additionally, a one-size-fits-all model lacks flexibility for diverse test data, leading to performance degradation. We show that both shared and exclusive task-specific knowledge are crucial for merging performance, but directly merging exclusive knowledge hinders overall performance. In view of this, we propose Twin-Merging, a method that encompasses two principal stages: (1) modularizing knowledge into shared and exclusive components, with compression to reduce redundancy and enhance efficiency; (2) dynamically merging shared and task-specific knowledge based on the input. This approach narrows the performance gap between merged and fine-tuned models and improves adaptability to heterogeneous data. Extensive experiments on $20$ datasets for both language and vision tasks demonstrate the effectiveness of our method, showing an average improvement of $28.34\%$ in absolute normalized score for discriminative tasks and even surpassing the fine-tuned upper bound on the generative tasks.

Miscellaneous Aspects of Machine Learning · Unsupervised and Semi-supervised Learning

Haoyang He, Yuhu Bai, Jiangning Zhang, Qingdong He, Hongxu Chen, Zhenye Gan, Chengjie Wang, Xiangtai Li, Guanzhong Tian, Lei Xie

Recent advancements in anomaly detection have seen the efficacy of CNN- and transformer-based approaches. However, CNNs struggle with long-range dependencies, while transformers are burdened by quadratic computational complexity. Mamba-based models, with their superior long-range modeling and linear efficiency, have garnered substantial attention. This study pioneers the application of Mamba to multi-class unsupervised anomaly detection, presenting MambaAD, which consists of a pre-trained encoder and a Mamba decoder featuring (Locality-Enhanced State Space) LSS modules at multi-scales. The proposed LSS module, integrating parallel cascaded (Hybrid State Space) HSS blocks and multi-kernel convolutions operations, effectively captures both long-range and local information. The HSS block, utilizing (Hybrid Scanning) HS encoders, encodes feature maps into five scanning methods and eight directions, thereby strengthening global connections through the (State Space Model) SSM. The use of Hilbert scanning and eight directions significantly improves feature sequence modeling. Comprehensive experiments on six diverse anomaly detection datasets and seven metrics demonstrate state-of-the-art performance, substantiating the method's effectiveness. The code and models are available at https://lewandofskee.github.io/projects/MambaAD.

Miscellaneous Aspects of Machine Learning · Kernel methods

Oleksii Kachaiev, Stefano Recanatesi

Empirical data can often be considered as samples from a set of probability distributions. Kernel methods have emerged as a natural approach for learning to classify these distributions. Although numerous kernels between distributions have been proposed, applying kernel methods to distribution regression tasks remains challenging, primarily because selecting a suitable kernel is not straightforward. Surprisingly, the question of learning a data-dependent distribution kernel has received little attention. In this paper, we propose a novel objective for the unsupervised learning of data-dependent distribution kernel, based on the principle of entropy maximization in the space of probability measure embeddings. We examine the theoretical properties of the latent embedding space induced by our objective, demonstrating that its geometric structure is well-suited for solving downstream discriminative tasks. Finally, we demonstrate the performance of the learned kernel across different modalities.

Miscellaneous Aspects of Machine Learning · Transfer, Multitask and Meta-learning

Zhenyi Wang, Heng Huang

Continual learning (CL) aims to adapt to non-stationary data distributions while retaining previously acquired knowledge. However, CL models typically face a trade-off between preserving old task knowledge and excelling in new task performance. Existing approaches often sacrifice one for the other. To overcome this limitation, orthogonal to existing approaches, we propose a novel perspective that views the CL model ability in preserving old knowledge and performing well in new task as a matter of model sensitivity to parameter updates. \textit{Excessive} parameter sensitivity can lead to two drawbacks: (1) significant forgetting of previous knowledge; and (2) overfitting to new tasks. To reduce parameter sensitivity, we optimize the model's performance based on the parameter distribution, which achieves the worst-case CL performance within a distribution neighborhood. This innovative learning paradigm offers dual benefits: (1) reduced forgetting of old knowledge by mitigating drastic changes in model predictions under small parameter updates; and (2) enhanced new task performance by preventing overfitting to new tasks. Consequently, our method achieves superior ability in retaining old knowledge and achieving excellent new task performance simultaneously.Importantly, our approach is compatible with existing CL methodologies, allowing seamless integration while delivering significant improvements in effectiveness, efficiency, and versatility with both theoretical and empirical supports.

Miscellaneous Aspects of Machine Learning · General Machine Learning Techniques

Samuel Holt, Zhaozhi Qian, Tennison Liu, Jim Weatherall, Mihaela van der Schaar

The discovery of dynamical systems is crucial across a range of fields, including pharmacology, epidemiology, and physical sciences. *Accurate* and *interpretable* modeling of these systems is essential for understanding complex temporal processes, optimizing interventions, and minimizing adverse effects. In pharmacology, for example, precise modeling of drug dynamics is vital to maximize therapeutic efficacy while minimizing patient harm, as in chemotherapy. However, current models, often developed by human experts, are limited by high cost, lack of scalability, and restriction to existing human knowledge. In this paper, we present the **Data-Driven Discovery (D3)** framework, a novel approach leveraging Large Language Models (LLMs) to iteratively discover and refine interpretable models of dynamical systems, demonstrated here with pharmacological applications. Unlike traditional methods, D3 enables the LLM to propose, acquire, and integrate new features, validate, and compare dynamical systems models, uncovering new insights into pharmacokinetics. Experiments on a pharmacokinetic Warfarin dataset reveal that D3 identifies a new plausible model that is well-fitting, highlighting its potential for precision dosing in clinical applications.

Miscellaneous Aspects of Machine Learning · Supervised Learning

Jin-Hong Du, Pratik Patil

We study the implicit regularization effects induced by (observation) weighting of pretrained features.For weight and feature matrices of bounded operator norms that are infinitesimally free with respect to (normalized) trace functionals, we derive equivalence paths connecting different weighting matrices and ridge regularization levels.Specifically, we show that ridge estimators trained on weighted features along the same path are asymptotically equivalent when evaluated against test vectors of bounded norms.These paths can be interpreted as matching the effective degrees of freedom of ridge estimators fitted with weighted features.For the special case of subsampling without replacement, our results apply to independently sampled random features and kernel features and confirm recent conjectures (Conjectures 7 and 8) of the authors on the existence of such paths in Patil and Du (2023).We also present an additive risk decomposition for ensembles of weighted estimators and show that the risks are equivalent along the paths when the ensemble size goes to infinity.As a practical consequence of the path equivalences, we develop an efficient cross-validation method for tuning and apply it to subsampled pretrained representations across several models (e.g., ResNet-50) and datasets (e.g., CIFAR-100).

Miscellaneous Aspects of Machine Learning · Unsupervised and Semi-supervised Learning

Wenjun Zhang, Liangxiao Jiang, Chaoqun Li

In recent years, a large number of algorithms for label integration and noise correction have been proposed to infer the unknown true labels of instances in crowdsourcing. They have made great advances in improving the label quality of crowdsourced datasets. However, due to the presence of intractable instances, these algorithms are usually not as significant in improving the model quality as they are in improving the label quality. To improve the model quality, this paper proposes an instance weighting-based bias-variance trade-off (IWBVT) approach. IWBVT at first proposes a novel instance weighting method based on the complementary set and entropy, which mitigates the impact of intractable instances and thus makes the bias and variance of trained models closer to the unknown true results. Then, IWBVT performs probabilistic loss regressions based on the bias-variance decomposition, which achieves the bias-variance trade-off and thus reduces the generalization error of trained models. Experimental results indicate that IWBVT can serve as a universal post-processing approach to significantly improving the model quality of existing state-of-the-art label integration algorithms and noise correction algorithms.

Miscellaneous Aspects of Machine Learning · General Machine Learning Techniques

William Redman, Juan Bello-Rivas, Maria Fonoberova, Ryan Mohr, Yannis Kevrekidis, Igor Mezic

Study of the nonlinear evolution deep neural network (DNN) parameters undergo during training has uncovered regimes of distinct dynamical behavior. While a detailed understanding of these phenomena has the potential to advance improvements in training efficiency and robustness, the lack of methods for identifying when DNN models have equivalent dynamics limits the insight that can be gained from prior work. Topological conjugacy, a notion from dynamical systems theory, provides a precise definition of dynamical equivalence, offering a possible route to address this need. However, topological conjugacies have historically been challenging to compute. By leveraging advances in Koopman operator theory, we develop a framework for identifying conjugate and non-conjugate training dynamics. To validate our approach, we demonstrate that comparing Koopman eigenvalues can correctly identify a known equivalence between online mirror descent and online gradient descent. We then utilize our approach to: (a) identify non-conjugate training dynamics between shallow and wide fully connected neural networks; (b) characterize the early phase of training dynamics in convolutional neural networks; (c) uncover non-conjugate training dynamics in Transformers that do and do not undergo grokking. Our results, across a range of DNN architectures, illustrate the flexibility of our framework and highlight its potential for shedding new light on training dynamics.

Miscellaneous Aspects of Machine Learning · Transfer, Multitask and Meta-learning

Mingyang Liu, Xinyang Chen, Yang Shu, Xiucheng Li, Weili Guan, Liqiang Nie

Unsupervised domain adaptation excels in transferring knowledge from a labeled source domain to an unlabeled target domain, playing a critical role in time series applications. Existing time series domain adaptation methods either ignore frequency features or treat temporal and frequency features equally, which makes it challenging to fully exploit the advantages of both types of features. In this paper, we delve into transferability and discriminability, two crucial properties in transferable representation learning. It's insightful to note that frequency features are more discriminative within a specific domain, while temporal features show better transferability across domains. Based on the findings, we propose **A**dversarial **CO**-learning **N**etworks (**ACON**), to enhance transferable representation learning through a collaborative learning manner in three aspects: (1) Considering the multi-periodicity in time series, multi-period frequency feature learning is proposed to enhance the discriminability of frequency features; (2) Temporal-frequency domain mutual learning is proposed to enhance the discriminability of temporal features in the source domain and improve the transferability of frequency features in the target domain; (3) Domain adversarial learning is conducted in the correlation subspaces of temporal-frequency features instead of original feature spaces to further enhance the transferability of both features. Extensive experiments conducted on a wide range of time series datasets and five common applications demonstrate the state-of-the-art performance of ACON. Code is available at <https://github.com/mingyangliu1024/ACON>.

Miscellaneous Aspects of Machine Learning · General Machine Learning Techniques

Yan Sun, Li Shen, Dacheng Tao

As a popular paradigm for juggling data privacy and collaborative training, federated learning (FL) is flourishing to distributively process the large scale of heterogeneous datasets on edged clients. Due to bandwidth limitations and security considerations, it ingeniously splits the original problem into multiple subproblems to be solved in parallel, which empowers primal dual solutions to great application values in FL. In this paper, we review the recent development of classical federated primal dual methods and point out a serious common defect of such methods in non-convex scenarios, which we say is a ``dual drift'' caused by dual hysteresis of those longstanding inactive clients under partial participation training. To further address this problem, we propose a novel Aligned Federated Primal Dual (A-FedPD) method, which constructs virtual dual updates to align global consensus and local dual variables for those protracted unparticipated local clients. Meanwhile, we provide a comprehensive analysis of the optimization and generalization efficiency for the A-FedPD method on smooth non-convex objectives, which confirms its high efficiency and practicality. Extensive experiments are conducted on several classical FL setups to validate the effectiveness of our proposed method.

Miscellaneous Aspects of Machine Learning · Unsupervised and Semi-supervised Learning

Fang Wu, Shuting Jin, Siyuan Li, Stan Z. Li

Machine learning catalyzes a revolution in chemical and biological science. However, its efficacy is heavily dependent on the availability of labeled data, and annotating biochemical data is extremely laborious. To surmount this data sparsity challenge, we present an instructive learning algorithm named InstructMol to measure pseudo-labels' reliability and help the target model leverage large-scale unlabeled data. InstructMol does not require transferring knowledge between multiple domains, which avoids the potential gap between the pretraining and fine-tuning stages. We demonstrated the high accuracy of InstructMol on several real-world molecular datasets and out-of-distribution (OOD) benchmarks.

Miscellaneous Aspects of Machine Learning · Unsupervised and Semi-supervised Learning

Gyusam Chang, Jiwon Lee, Donghyun Kim, Jinkyu Kim, Dongwook Lee, Daehyun Ji, Sujin Jang, Sangpil Kim

Recent advances in 3D object detection leveraging multi-view cameras have demonstrated their practical and economical value in various challenging vision tasks.However, typical supervised learning approaches face challenges in achieving satisfactory adaptation toward unseen and unlabeled target datasets (i.e., direct transfer) due to the inevitable geometric misalignment between the source and target domains.In practice, we also encounter constraints on resources for training models and collecting annotations for the successful deployment of 3D object detectors.In this paper, we propose Unified Domain Generalization and Adaptation (UDGA), a practical solution to mitigate those drawbacks.We first propose Multi-view Overlap Depth Constraint that leverages the strong association between multi-view, significantly alleviating geometric gaps due to perspective view changes.Then, we present a Label-Efficient Domain Adaptation approach to handle unfamiliar targets with significantly fewer amounts of labels (i.e., 1$\%$ and 5$\%)$, while preserving well-defined source knowledge for training efficiency.Overall, UDGA framework enables stable detection performance in both source and target domains, effectively bridging inevitable domain gaps, while demanding fewer annotations.We demonstrate the robustness of UDGA with large-scale benchmarks: nuScenes, Lyft, and Waymo, where our framework outperforms the current state-of-the-art methods.

Miscellaneous Aspects of Machine Learning · General Machine Learning Techniques

Andres Potapczynski, Shikai Qiu, Marc Finzi, Christopher Ferri, Charlie Chen, Micah Goldblum, C. Bayan Bruss, Christopher De Sa, Andrew Wilson

Dense linear layers are the dominant computational bottleneck in large neural networks, presenting a critical need for more efficient alternatives. Previous efforts to develop alternatives have focused on a small number of hand-crafted structured matrices, and have neglected to investigate whether these structures can surpass dense layers in terms of compute-optimal scaling laws when both the model size and training examples are optimally allocated. In this work, we present a unifying framework that enables searching among all linear operators expressible via an Einstein summation. This framework encompasses many previously proposed structures, such as low-rank, Kronecker, Tensor-Train, and Monarch, along with many novel structures. We develop a taxonomy of all such operators based on their computational and algebraic properties, which provides insights into their scaling laws. Combining these insights with empirical evaluation, we identify a subset of structures that achieve equal or better performance than dense layers as a function of training compute. To further improve their compute efficiency, we develop a natural extension of these performant structures that convert them into a sparse Mixture-of-Experts layer. The resulting layer significantly outperforms dense layers in compute-optimal training efficiency for GPT-2 language models.

Miscellaneous Aspects of Machine Learning · Transfer, Multitask and Meta-learning

Yixiong Zou, Shuai Yi, Yuhua Li, Ruixuan Li

Vision Transformer (ViT) has shown great power in learning from large-scale datasets. However, collecting sufficient data for expert knowledge is always difficult. To handle this problem, Cross-Domain Few-Shot Learning (CDFSL) has been proposed to transfer the source-domain knowledge learned from sufficient data to target domains where only scarce data is available. In this paper, we find an intriguing phenomenon neglected by previous works for the CDFSL task based on ViT: leaving the CLS token to random initialization, instead of loading source-domain trained parameters, could consistently improve target-domain performance. We then delve into this phenomenon for an interpretation. We find **the CLS token naturally absorbs domain information** due to the inherent structure of the ViT, which is represented as the low-frequency component in the Fourier frequency space of images. Based on this phenomenon and interpretation, we further propose a method for the CDFSL task to decouple the domain information in the CLS token during the source-domain training, and adapt the CLS token on the target domain for efficient few-shot learning. Extensive experiments on four benchmarks validate our rationale and state-of-the-art performance. Our codes are available at https://github.com/Zoilsen/CLS_Token_CDFSL.