论文检索

Data-centric AI/Data augmentation

Lisa Dunlap, Alyssa Umino, Han Zhang, Jiezhi Yang, Joseph Gonzalez, Trevor Darrell

Many fine-grained classification tasks, like rare animal identification, have limited training data and consequently classifiers trained on these datasets often fail to generalize to variations in the domain like changes in weather or location. As such, we explore how natural language descriptions of the domains seen in training data can be used with large vision models trained on diverse pretraining datasets to generate useful variations of the training data. We introduce ALIA (Automated Language-guided Image Augmentation), a method which utilizes large vision and language models to automatically generate natural language descriptions of a dataset's domains and augment the training data via language-guided image editing. To maintain data integrity, a model trained on the original dataset filters out minimal image edits and those which corrupt class-relevant information. The resulting dataset is visually consistent with the original training data and offers significantly enhanced diversity. We show that ALIA is able to surpasses traditional data augmentation and text-to-image generated data on fine-grained classification tasks, including cases of domain generalization and contextual bias. Code is available at https://github.com/lisadunlap/ALIA.

Reinforcement Learning/Batch Offline

Peng Cheng, Xianyuan Zhan, zhihao wu, Wenjia Zhang, Youfang Lin, Shou cheng Song, Han Wang, Li Jiang

Offline reinforcement learning (RL) offers an appealing approach to real-world tasks by learning policies from pre-collected datasets without interacting with the environment. However, the performance of existing offline RL algorithms heavily depends on the scale and state-action space coverage of datasets. Real-world data collection is often expensive and uncontrollable, leading to small and narrowly covered datasets and posing significant challenges for practical deployments of offline RL. In this paper, we provide a new insight that leveraging the fundamental symmetry of system dynamics can substantially enhance offline RL performance under small datasets. Specifically, we propose a Time-reversal symmetry (T-symmetry) enforced Dynamics Model (TDM), which establishes consistency between a pair of forward and reverse latent dynamics. TDM provides both well-behaved representations for small datasets and a new reliability measure for OOD samples based on compliance with the T-symmetry. These can be readily used to construct a new offline RL algorithm (TSRL) with less conservative policy constraints and a reliable latent space data augmentation procedure. Based on extensive experiments, we find TSRL achieves great performance on small benchmark datasets with as few as 1% of the original samples, which significantly outperforms the recent offline RL algorithms in terms of data efficiency and generalizability. Code is available at:https://github.com/pcheng2/TSRL

Deep Learning/Graph Neural Networks

Qitian Wu, Wentao Zhao, Chenxiao Yang, Hengrui Zhang, Fan Nie, Haitian Jiang, Yatao Bian, Junchi Yan

Learning representations on large-sized graphs is a long-standing challenge due to the inter-dependence nature involved in massive data points. Transformers, as an emerging class of foundation encoders for graph-structured data, have shown promising performance on small graphs due to its global attention capable of capturing all-pair influence beyond neighboring nodes. Even so, existing approaches tend to inherit the spirit of Transformers in language and vision tasks, and embrace complicated models by stacking deep multi-head attentions. In this paper, we critically demonstrate that even using a one-layer attention can bring up surprisingly competitive performance across node property prediction benchmarks where node numbers range from thousand-level to billion-level. This encourages us to rethink the design philosophy for Transformers on large graphs, where the global attention is a computation overhead hindering the scalability. We frame the proposed scheme as Simplified Graph Transformers (SGFormer), which is empowered by a simple attention model that can efficiently propagate information among arbitrary nodes in one layer. SGFormer requires none of positional encodings, feature/graph pre-processing or augmented loss. Empirically, SGFormer successfully scales to the web-scale graph ogbn-papers100M and yields up to 141x inference acceleration over SOTA Transformers on medium-sized graphs. Beyond current results, we believe the proposed methodology alone enlightens a new technical path of independent interest for building Transformers on large graphs.

Applications/Chemistry and Drug Discovery

Bowen Gao, Bo Qiang, Haichuan Tan, Yinjun Jia, Minsi Ren, Minsi Lu, Jingjing Liu, Wei-Ying Ma, Yanyan Lan

Virtual screening, which identifies potential drugs from vast compound databases to bind with a particular protein pocket, is a critical step in AI-assisted drug discovery. Traditional docking methods are highly time-consuming, and can only work with a restricted search library in real-life applications. Recent supervised learning approaches using scoring functions for binding-affinity prediction, although promising, have not yet surpassed docking methods due to their strong dependency on limited data with reliable binding-affinity labels. In this paper, we propose a novel contrastive learning framework, DrugCLIP, by reformulating virtual screening as a dense retrieval task and employing contrastive learning to align representations of binding protein pockets and molecules from a large quantity of pairwise data without explicit binding-affinity scores. We also introduce a biological-knowledge inspired data augmentation strategy to learn better protein-molecule representations. Extensive experiments show that DrugCLIP significantly outperforms traditional docking and supervised learning methods on diverse virtual screening benchmarks with highly reduced computation time, especially in zero-shot setting.

Applications/Neuroscience, Cognitive Science

Ankit Vishnubhotla, Charlotte Loh, Akash Srivastava, Liam Paninski, Cole Hurwitz

Contrastive learning is quickly becoming an essential tool in neuroscience for extracting robust and meaningful representations of neural activity. Despite numerous applications to neuronal population data, there has been little exploration of how these methods can be adapted to key primary data analysis tasks such as spike sorting or cell-type classification. In this work, we propose a novel contrastive learning framework, CEED (Contrastive Embeddings for Extracellular Data), for high-density extracellular recordings. We demonstrate that through careful design of the network architecture and data augmentations, it is possible to generically extract representations that far outperform current specialized approaches. We validate our method across multiple high-density extracellular recordings. All code used to run CEED can be found at https://github.com/ankitvishnu23/CEED.

Deep Learning/Everything Else

Tara Akhound-Sadegh, Laurence Perreault-Levasseur, Johannes Brandstetter, Max Welling, Siamak Ravanbakhsh

Symmetries have been leveraged to improve the generalization of neural networks through different mechanisms from data augmentation to equivariant architectures. However, despite their potential, their integration into neural solvers for partial differential equations (PDEs) remains largely unexplored. We explore the integration of PDE symmetries, known as Lie point symmetries, in a major family of neural solvers known as physics-informed neural networks (PINNs). We propose a loss function that informs the network about Lie point symmetries in the same way that PINN models try to enforce the underlying PDE through a loss function. Intuitively, our symmetry loss ensures that the infinitesimal generators of the Lie group conserve the PDE solutions.. Effectively, this means that once the network learns a solution, it also learns the neighbouring solutions generated by Lie point symmetries.Empirical evaluations indicate that the inductive bias introduced by the Lie point symmetries of the PDEs greatly boosts the sample efficiency of PINNs.

Applications/Physics

Taoli Cheng, Aaron Courville

As a classical generative modeling approach, energy-based models have the natural advantage of flexibility in the form of the energy function. Recently, energy-based models have achieved great success in modeling high-dimensional data in computer vision and natural language processing. In line with these advancements, we build a multi-purpose energy-based probabilistic model for High Energy Physics events at the Large Hadron Collider. This framework builds on a powerful generative model and describes higher-order inter-particle interactions. It suits different encoding architectures and builds on implicit generation. As for applicative aspects, it can serve as a powerful parameterized event generator for physics simulation, a generic anomalous signal detector free from spurious correlations, and an augmented event classifier for particle identification.

Social Aspects/Trustworthy Machine Learning

Polina Kirichenko, Mark Ibrahim, Randall Balestriero, Diane Bouchacourt, Shanmukha Ramakrishna Vedantam, Hamed Firooz, Andrew Wilson

Data augmentation (DA) encodes invariance and provides implicit regularization critical to a model's performance in image classification tasks. However, while DA improves average accuracy, recent studies have shown that its impact can be highly class dependent: achieving optimal average accuracy comes at the cost of significantly hurting individual class accuracy by as much as 20% on ImageNet. There has been little progress in resolving class-level accuracy drops due to a limited understanding of these effects. In this work, we present a framework for understanding how DA interacts with class-level learning dynamics. Using higher-quality multi-label annotations on ImageNet, we systematically categorize the affected classes and find that the majority are inherently ambiguous, co-occur, or involve fine-grained distinctions, while DA controls the model's bias towards one of the closely related classes. While many of the previously reported performance drops are explained by multi-label annotations, we identify other sources of accuracy degradations by analyzing class confusions. We show that simple class-conditional augmentation strategies informed by our framework improve performance on the negatively affected classes.

Deep Learning/Generative Models and Autoencoders

Diederik Kingma, Ruiqi Gao

To achieve the highest perceptual quality, state-of-the-art diffusion models are optimized with objectives that typically look very different from the maximum likelihood and the Evidence Lower Bound (ELBO) objectives. In this work, we reveal that diffusion model objectives are actually closely related to the ELBO.Specifically, we show that all commonly used diffusion model objectives equate to a weighted integral of ELBOs over different noise levels, where the weighting depends on the specific objective used. Under the condition of monotonic weighting, the connection is even closer: the diffusion objective then equals the ELBO, combined with simple data augmentation, namely Gaussian noise perturbation. We show that this condition holds for a number of state-of-the-art diffusion models. In experiments, we explore new monotonic weightings and demonstrate their effectiveness, achieving state-of-the-art FID scores on the high-resolution ImageNet benchmark.

Applications/Neuroscience, Cognitive Science

Galen Pogoncheff, Jacob Granley, Michael Beyeler

Convolutional neural networks (CNNs) have recently emerged as promising models of the ventral visual stream, despite their lack of biological specificity.While current state-of-the-art models of the primary visual cortex (V1) have surfaced from training with adversarial examples and extensively augmented data, these models are still unable to explain key neural properties observed in V1 that arise from biological circuitry.To address this gap, we systematically incorporated neuroscience-derived architectural components into CNNs to identify a set of mechanisms and architectures that more comprehensively explain V1 activity.Upon enhancing task-driven CNNs with architectural components that simulate center-surround antagonism, local receptive fields, tuned normalization, and cortical magnification, we uncover models with latent representations that yield state-of-the-art explanation of V1 neural activity and tuning properties.Moreover, analyses of the learned parameters of these components and stimuli that maximally activate neurons of the evaluated networks provide support for their role in explaining neural properties of V1.Our results highlight an important advancement in the field of NeuroAI, as we systematically establish a set of architectural components that contribute to unprecedented explanation of V1.The neuroscience insights that could be gleaned from increasingly accurate in-silico models of the brain have the potential to greatly advance the fields of both neuroscience and artificial intelligence.

Deep Learning/Generative Models and Autoencoders

Lakshya A Agrawal, Aditya Kanade, Navin Goyal, Shuvendu Lahiri, Sriram Rajamani

Language models of code (LMs) work well when the surrounding code provides sufficient context. This is not true when it becomes necessary to use types, functionality or APIs defined elsewhere in the repository or a linked library, especially those not seen during training. LMs suffer from limited awareness of such global context and end up hallucinating.Integrated development environments (IDEs) assist developers in understanding repository context using static analysis. We extend this assistance, enjoyed by developers, to LMs. We propose monitor-guided decoding (MGD) where a monitor uses static analysis to guide the decoding. We construct a repository-level dataset PragmaticCode for method-completion in Java and evaluate MGD on it. On models of varying parameter scale, by monitoring for type-consistent object dereferences, MGD consistently improves compilation rates and agreement with ground truth. Further, LMs with fewer parameters, when augmented with MGD, can outperform larger LMs. With MGD, SantaCoder-1.1B achieves better compilation rate and next-identifier match than the much larger text-davinci-003 model.We also conduct a generalizability study to evaluate the ability of MGD to generalize to multiple programming languages (Java, C# and Rust), coding scenarios (e.g., correct number of arguments to method calls), and to enforce richer semantic constraints (e.g., stateful API protocols). Our data and implementation are available at https://github.com/microsoft/monitors4codegen.

Reinforcement Learning/Planning

Kalle Kujanpää, Joni Pajarinen, Alexander Ilin

Solving complex planning problems has been a long-standing challenge in computer science. Learning-based subgoal search methods have shown promise in tackling these problems, but they often suffer from a lack of completeness guarantees, meaning that they may fail to find a solution even if one exists. In this paper, we propose an efficient approach to augment a subgoal search method to achieve completeness in discrete action spaces. Specifically, we augment the high-level search with low-level actions to execute a multi-level (hybrid) search, which we call complete subgoal search. This solution achieves the best of both worlds: the practical efficiency of high-level search and the completeness of low-level search. We apply the proposed search method to a recently proposed subgoal search algorithm and evaluate the algorithm trained on offline data on complex planning problems. We demonstrate that our complete subgoal search not only guarantees completeness but can even improve performance in terms of search expansions for instances that the high-level could solve without low-level augmentations. Our approach makes it possible to apply subgoal-level planning for systems where completeness is a critical requirement.

Theory/Learning Theory

Chenyu Zheng, Guoqiang Wu, Chongxuan LI

Generative data augmentation, which scales datasets by obtaining fake labeled examples from a trained conditional generative model, boosts classification performance in various learning tasks including (semi-)supervised learning, few-shot learning, and adversarially robust learning. However, little work has theoretically investigated the effect of generative data augmentation. To fill this gap, we establish a general stability bound in this not independently and identicallydistributed (non-i.i.d.) setting, where the learned distribution is dependent on the original train set and generally not the same as the true distribution. Our theoretical result includes the divergence between the learned distribution and the true distribution. It shows that generative data augmentation can enjoy a faster learning rate when the order of divergence term is $o(\max\left( \log(m)\beta_m, 1 / \sqrt{m})\right)$, where $m$ is the train set size and $\beta_m$ is the corresponding stability constant. We further specify the learning setup to the Gaussian mixture model and generative adversarial nets. We prove that in both cases, though generative data augmentation does not enjoy a faster learning rate, it can improve the learning guarantees at a constant level when the train set is small, which is significant when the awful overfitting occurs. Simulation results on the Gaussian mixture model and empirical results on generative adversarial nets support our theoretical conclusions.

Theory/Optimization

Jiangtao Zhang, Shunyu Liu, Jie Song, Tongtian Zhu, Zhengqi Xu, Mingli Song

Weight Average (WA) is an active research topic due to its simplicity in ensembling deep networks and the effectiveness in promoting generalization. Existing weight average approaches, however, are often carried out along only one training trajectory in a post-hoc manner (i.e., the weights are averaged after the entire training process is finished), which significantly degrades the diversity between networks and thus impairs the effectiveness. In this paper, inspired by weight average, we propose Lookaround, a straightforward yet effective SGD-based optimizer leading to flatter minima with better generalization. Specifically, Lookaround iterates two steps during the whole training period: the around step and the average step. In each iteration, 1) the around step starts from a common point and trains multiple networks simultaneously, each on transformed data by a different data augmentation, and 2) the average step averages these trained networks to get the averaged network, which serves as the starting point for the next iteration. The around step improves the functionality diversity while the average step guarantees the weight locality of these networks during the whole training, which is essential for WA to work. We theoretically explain the superiority of Lookaround by convergence analysis, and make extensive experiments to evaluate Lookaround on popular benchmarks including CIFAR and ImageNet with both CNNs and ViTs, demonstrating clear superiority over state-of-the-arts. Our code is available at https://github.com/Ardcy/Lookaround.

Deep Learning/Generative Models and Autoencoders

Zhibin Duan, Zhiyi Lv, Chaojie Wang, Bo Chen, Bo An, Mingyuan Zhou

Aimed at adapting a generative model to a novel generation task with only a few given data samples, the capability of few-shot generation is crucial for many real-world applications with limited data, \emph{e.g.}, artistic domains.Instead of training from scratch, recent works tend to leverage the prior knowledge stored in previous datasets, which is quite similar to the memory mechanism of human intelligence, but few of these works directly imitate the memory-recall mechanism that humans make good use of in accomplishing creative tasks, \emph{e.g.}, painting and writing.Inspired by the memory mechanism of human brain, in this work, we carefully design a variational structured memory module (VSM), which can simultaneously store both episodic and semantic memories to assist existing generative models efficiently recall these memories during sample generation.Meanwhile, we introduce a bionic memory updating strategy for the conversion between episodic and semantic memories, which can also model the uncertainty during conversion.Then, we combine the developed VSM with various generative models under the Bayesian framework, and evaluate these memory-augmented generative models with few-shot generation tasks, demonstrating the effectiveness of our methods.

Deep Learning/Self-Supervised Learning

Marina Munkhoeva, Ivan Oseledets

Self-supervised methods received tremendous attention thanks to their seemingly heuristic approach to learning representations that respect the semantics of the data without any apparent supervision in the form of labels. A growing body of literature is already being published in an attempt to build a coherent and theoretically grounded understanding of the workings of a zoo of losses used in modern self-supervised representation learning methods. In this paper, we attempt to provide an understanding from the perspective of a Laplace operator and connect the inductive bias stemming from the augmentation process to a low-rank matrix completion problem.To this end, we leverage the results from low-rank matrix completion to provide theoretical analysis on the convergence of modern SSL methods and a key property that affects their downstream performance.

Reinforcement Learning/Batch Offline

Honghao Wei, Xin Liu, Weina Wang, Lei Ying

This paper considers a class of reinforcement learning problems, which involve systems with two types of states: stochastic and pseudo-stochastic. In such systems, stochastic states follow a stochastic transition kernel while the transitions of pseudo-stochastic states are deterministic {\em given} the stochastic states/transitions. We refer to such systems as mixed systems, which are widely used in various applications, including Manufacturing systems, communication networks, and queueing networks. We propose a sample-efficient RL method that accelerates learning by generating augmented data samples. The proposed algorithm is data-driven (model-free), but it learns the policy from data samples from both real and augmented samples. This method significantly improves learning by reducing the sample complexity such that the dataset only needs to have sufficient coverage of the stochastic states. We analyze the sample complexity of the proposed method under Fitted Q Iteration (FQI) and demonstrate that the optimality gap decreases as $O\left(\sqrt{\frac{1}{n}}+\sqrt{\frac{1}{m}}\right),$ where $n$ represents the number of real samples, and $m$ is the number of augmented samples per real sample. It is important to note that without augmented samples, the optimality gap is $O(1)$ due to the insufficient data coverage of the pseudo-stochastic states. Our experimental results on multiple queueing network applications confirm that the proposed method indeed significantly accelerates both deep Q-learning and deep policy gradient.

Ravid Shwartz-Ziv, Micah Goldblum, Yucen Li, C. Bayan Bruss, Andrew Wilson

Real-world datasets are often highly class-imbalanced, which can adversely impact the performance of deep learning models. The majority of research on training neural networks under class imbalance has focused on specialized loss functions and sampling techniques. Notably, we demonstrate that simply tuning existing components of standard deep learning pipelines, such as the batch size, data augmentation, architecture size, pre-training, optimizer, and label smoothing, can achieve state-of-the-art performance without any specialized loss functions or samplers. We also provide key prescriptions and considerations for training under class imbalance, and an understanding of why imbalance methods succeed or fail.

Miscellaneous Aspects of Machine Learning/Scalable Algorithms

Anders Aamand, Justin Chen, Huy Nguyen, Sandeep Silwal, Ali Vakilian

Estimating frequencies of elements appearing in a data stream is a key task in large-scale data analysis. Popular sketching approaches to this problem (e.g., CountMin and CountSketch) come with worst-case guarantees that probabilistically bound the error of the estimated frequencies for any possible input. The work of Hsu et al.~(2019) introduced the idea of using machine learning to tailor sketching algorithms to the specific data distribution they are being run on. In particular, their learning-augmented frequency estimation algorithm uses a learned heavy-hitter oracle which predicts which elements will appear many times in the stream. We give a novel algorithm, which in some parameter regimes, already theoretically outperforms the learning based algorithm of Hsu et al. *without* the use of any predictions. Augmenting our algorithm with heavy-hitter predictions further reduces the error and improves upon the state of the art. Empirically, our algorithms achieve superior performance in all experiments compared to prior approaches.

Applications/Chemistry and Drug Discovery

Filip Ekström Kelvinius, Dimitar Georgiev, Artur Toshev, Johannes Gasteiger

Recent advances in graph neural networks (GNNs) have enabled more comprehensive modeling of molecules and molecular systems, thereby enhancing the precision of molecular property prediction and molecular simulations. Nonetheless, as the field has been progressing to bigger and more complex architectures, state-of-the-art GNNs have become largely prohibitive for many large-scale applications. In this paper, we explore the utility of knowledge distillation (KD) for accelerating molecular GNNs. To this end, we devise KD strategies that facilitate the distillation of hidden representations in directional and equivariant GNNs, and evaluate their performance on the regression task of energy and force prediction. We validate our protocols across different teacher-student configurations and datasets, and demonstrate that they can consistently boost the predictive accuracy of student models without any modifications to their architecture. Moreover, we conduct comprehensive optimization of various components of our framework, and investigate the potential of data augmentation to further enhance performance. All in all, we manage to close the gap in predictive accuracy between teacher and student models by as much as 96.7\% and 62.5\% for energy and force prediction respectively, while fully preserving the inference throughput of the more lightweight models.