Dynamic graphs capture evolving interactions between entities, such as in social networks, online learning platforms, and crowdsourcing projects. For dynamic graph modeling, dynamic graph neural networks (DGNNs) have emerged as a mainstream technique. However, they are generally pre-trained on the link prediction task, leaving a significant gap from the objectives of downstream tasks such as node classification. To bridge the gap, prompt-based learning has gained traction on graphs, but most existing efforts focus on static graphs, neglecting the evolution of dynamic graphs. In this paper, we propose DyGPrompt, a novel pre-training and prompt learning framework for dynamic graph modeling. First, we design dual prompts to address the gap in both task objectives and temporal variations across pre-training and downstream tasks. Second, we recognize that node and time patterns often characterize each other, and propose dual condition-nets to model the evolving node-time patterns in downstream tasks. Finally, we thoroughly evaluate and analyze DyGPrompt through extensive experiments on four public datasets.
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Deep Learning · Sequential Models, Time series
Time series analysis plays a critical role in numerous applications, supporting tasks such as forecasting, classification, anomaly detection, and imputation. In this work, we present the time series pattern machine (TSPM), a model designed to excel in a broad range of time series tasks through powerful representation and pattern extraction capabilities. Traditional time series models often struggle to capture universal patterns, limiting their effectiveness across diverse tasks. To address this, we define multiple scales in the time domain and various resolutions in the frequency domain, employing various mixing strategies to extract intricate, task-adaptive time series patterns. Specifically, we introduce \method, a general-purpose TSPM that processes multi-scale time series using (1) multi-resolution time imaging (MRTI), (2) time image decomposition (TID), (3) multi-scale mixing (MCM), and (4) multi-resolution mixing (MRM) to extract comprehensive temporal patterns. MRTI transforms multi-scale time series into multi-resolution time images, capturing patterns across both temporal and frequency domains. TID leverages dual-axis attention to extract seasonal and trend patterns, while MCM hierarchically aggregates these patterns across scales. MRM adaptively integrates all representations across resolutions. TimeMixer++ achieves state-of-the-art performance across 8 time series analytical tasks, consistently surpassing both general-purpose and task-specific models. Our work marks a promising step toward the next generation of TSPMs, paving the way for further advancements in time series analysis.
Deep Learning · Sequential Models, Time series
Time series analysis plays a critical role in numerous applications, supporting tasks such as forecasting, classification, anomaly detection, and imputation. In this work, we present the time series pattern machine (TSPM), a model designed to excel in a broad range of time series tasks through powerful representation and pattern extraction capabilities. Traditional time series models often struggle to capture universal patterns, limiting their effectiveness across diverse tasks. To address this, we define multiple scales in the time domain and various resolutions in the frequency domain, employing various mixing strategies to extract intricate, task-adaptive time series patterns. Specifically, we introduce TimeMixer++, a general-purpose TSPM that processes multi-scale time series using (1) multi-resolution time imaging (MRTI), (2) time image decomposition (TID), (3) multi-scale mixing (MCM), and (4) multi-resolution mixing (MRM) to extract comprehensive temporal patterns. MRTI transforms multi-scale time series into multi-resolution time images, capturing patterns across both temporal and frequency domains. TID leverages dual-axis attention to extract seasonal and trend patterns, while MCM hierarchically aggregates these patterns across scales. MRM adaptively integrates all representations across resolutions. TimeMixer++ achieves state-of-the-art performance across 8 time series analytical tasks, consistently surpassing both general-purpose and task-specific models. Our work marks a promising step toward the next generation of TSPMs, paving the way for further advancements in time series analysis.
Deep Learning · Large Language Models
With the recent emergence of foundation models trained on internet-scale data and demonstrating remarkable generalization capabilities, such foundation models have become more widely adopted, leading to an expanding range of application domains. Despite this rapid proliferation, the trustworthiness of foundation models remains underexplored. Specifically, the out-of-distribution detection (OoDD) capabilities of large vision-language models (LVLMs), such as GPT-4o, which are trained on massive multi-modal data, have not been sufficiently addressed. The disparity between their demonstrated potential and practical reliability raises concerns regarding the safe and trustworthy deployment of foundation models. To address this gap, we evaluate and analyze the OoDD capabilities of various proprietary and open-source LVLMs. Our investigation contributes to a better understanding of how these foundation models represent confidence scores through their generated natural language responses. Furthermore, we propose a self-guided prompting approach, termed Reflexive Guidance (ReGuide), aimed at enhancing the OoDD capability of LVLMs by leveraging self-generated image-adaptive concept suggestions. Experimental results demonstrate that our ReGuide enhances the performance of current LVLMs in both image classification and OoDD tasks. The lists of sampled images, along with the prompts and responses for each sample are available at https://github.com/daintlab/ReGuide.
Applications · Computer Vision
We present a novel frequency-based Self-Supervised Learning (SSL) approach that significantly enhances its efficacy for pre-training. Prior work in this direction masks out pre-defined frequencies in the input image and employs a reconstruction loss to pre-train the model. While achieving promising results, such an implementation has two fundamental limitations as identified in our paper. First, using pre-defined frequencies overlooks the variability of image frequency responses. Second, pre-trained with frequency-filtered images, the resulting model needs relatively more data to adapt to naturally looking images during fine-tuning. To address these drawbacks, we propose FOurier transform compression with seLf-Knowledge distillation (FOLK), integrating two dedicated ideas. First, inspired by image compression, we adaptively select the masked-out frequencies based on image frequency responses, creating more suitable SSL tasks for pre-training. Second, we employ a two-branch framework empowered by knowledge distillation, enabling the model to take both the filtered and original images as input, largely reducing the burden of downstream tasks. Our experimental results demonstrate the effectiveness of FOLK in achieving competitive performance to many state-of-the-art SSL methods across various downstream tasks, including image classification, few-shot learning, and semantic segmentation.
Deep Learning · Robustness
Robustness is essential for deep neural networks, especially in security-sensitive applications. To this end, randomized smoothing provides theoretical guarantees for certifying robustness against adversarial perturbations. Recently, diffusion models have been successfully employed for randomized smoothing to purify noise-perturbed samples before making predictions with a standard classifier. While these methods excel at small perturbation radii, they struggle with larger perturbations and incur a significant computational overhead during inference compared to classical methods. To address this, we reformulate the generative modeling task along the diffusion trajectories in pixel space as a discriminative task in the latent space. Specifically, we use instance discrimination to achieve consistent representations along the trajectories by aligning temporally adjacent points. After fine-tuning based on the learned representations, our model enables implicit denoising-then-classification via a single prediction, substantially reducing inference costs. We conduct extensive experiments on various datasets and achieve state-of-the-art performance with minimal computation budget during inference. For example, our method outperforms the certified accuracy of diffusion-based methods on ImageNet across all perturbation radii by 5.3\% on average, with up to 11.6\% at larger radii, while reducing inference costs by 85x on average.
Deep Learning · Other Representation Learning
This paper tackles a new problem of dataset pruning for Knowledge Distillation (KD), from a fresh perspective of Decision Boundary (DB) preservation and drifts. Existing dataset pruning methods generally assume that the post-pruning DB formed by the selected samples can be well-captured by future networks that use those samples for training. Therefore, they tend to preserve hard samples since hard samples are closer to the DB and better characterize the nuances in the distribution of the entire dataset. However, in KD, the limited learning capacity from the student network leads to imperfect preservation of the teacher's feature distribution, resulting in the drift of DB in the student space. Specifically, hard samples worsen such drifts as they are difficult for the student to learn, creating a situation where the student's DB can drift deeper into other classes and make incorrect classifications. Motivated by these findings, our method selects medium-difficulty samples for KD-based dataset pruning. We show that these samples constitute a smoothed version of the teacher's DB and are easier for the student to learn, obtaining a general feature distribution preservation for a class of samples and reasonable DB between different classes for the student. In addition, to reduce the distributional shift due to dataset pruning, we leverage the class-wise distributional information of the teacher's outputs to reshape the logits of the preserved samples. Experiments show that the proposed static pruning method can even perform better than the state-of-the-art dynamic pruning method which needs access to the entire dataset. In addition, our method halves the training times of KD and improves the student's accuracy by 0.4% on ImageNet with a 50% keep ratio. When the ratio further increases to 70%, our method achieves higher accuracy over the vanilla KD while reducing the training times by 30%. Code is available at https://github.com/chenyd7/MDSLR.
Miscellaneous Aspects of Machine Learning · Transfer, Multitask and Meta-learning
Prompt learning has proven effective in adapting vision language models for downstream tasks. However, existing methods usually append learnable prompt tokens solely with the category names to obtain textual features, which fails to fully leverage the rich context indicated in the category name. To address this issue, we propose the Tree of Attributes Prompt learning (TAP), which first instructs LLMs to generate a tree of attributes with a “concept - attribute - description” structure for each category, and then learn the hierarchy with vision and text prompt tokens. Unlike existing methods that merely augment category names with a set of unstructured descriptions, our approach essentially distills structured knowledge graphs associated with class names from LLMs. Furthermore, our approach introduces text and vision prompts designed to explicitly learn the corresponding visual attributes, effectively serving as domain experts. Additionally, the general and diverse descriptions generated based on the class names may be wrong or absent in the specific given images. To address this misalignment, we further introduce a vision-conditional pooling module to extract instance-specific text features. Extensive experimental results demonstrate that our approach outperforms state-of-the-art methods on the zero-shot base-to-novel generalization, cross-dataset transfer, as well as few-shot classification across 11 diverse datasets. Code is available at https://github.com/HHenryD/TAP.
Miscellaneous Aspects of Machine Learning · Supervised Learning
Boosting has garnered significant interest across both machine learning and statistical communities. Traditional boosting algorithms, designed for fully observed random samples, often struggle with real-world problems, particularly with interval-censored data. This type of data is common in survival analysis and time-to-event studies where exact event times are unobserved but fall within known intervals. Effective handling of such data is crucial in fields like medical research, reliability engineering, and social sciences. In this work, we introduce novel nonparametric boosting methods for regression and classification tasks with interval-censored data. Our approaches leverage censoring unbiased transformations to adjust loss functions and impute transformed responses while maintaining model accuracy. Implemented via functional gradient descent, these methods ensure scalability and adaptability. We rigorously establish their theoretical properties, including optimality and mean squared error trade-offs. Our proposed methods not only offer a robust framework for enhancing predictive accuracy in domains where interval-censored data are common but also complement existing work, expanding the applicability of existing boosting techniques. Empirical studies demonstrate robust performance across various finite-sample scenarios, highlighting the practical utility of our approaches.
The trade-off between expressiveness and interpretability remains a core challenge when building human-centric models for classification and decision-making. While symbolic rules offer interpretability, they often lack expressiveness, whereas neural networks excel in performance but are known for being black boxes. This paper shows a combination of Large Language Models (LLMs) and symbolic programs can bridge this gap. In the proposed LLM-based Symbolic Programs (LSPs), the pretrained LLM with natural language prompts provides a massive set of interpretable modules that can transform raw input into natural language concepts. Symbolic programs then integrate these modules into interpretable decision rules. To train LSPs, we develop a divide-and-conquer approach to incrementally build the program from scratch, where the learning process of each step is guided by LLMs. To evaluate the effectiveness of LSPs in extracting interpretable and accurate knowledge from data, we introduce IL-Bench, a collection of diverse tasks, including both synthetic and real-world scenarios across different modalities. Empirical results demonstrate LSP's superior performance compared to traditional neurosymbolic programs and vanilla automatic prompt tuning methods. Moreover, as the knowledge learned by LSP is a combination of natural language descriptions and symbolic rules, it is easily transferable to humans (interpretable), and other LLMs, and generalizes well to out-of-distribution samples. Our code and benchmark will be released for future research.
Supervised learning has become a cornerstone of modern machine learning, yet a comprehensive theory explaining its effectiveness remains elusive. Empirical phenomena, such as neural analogy-making and the linear representation hypothesis, suggest that supervised models can learn interpretable factors of variation in a linear fashion. Recent advances in self-supervised learning, particularly nonlinear Independent Component Analysis, have shown that these methods can recover latent structures by inverting the data generating process. We extend these identifiability results to parametric instance discrimination, then show how insights transfer to the ubiquitous setting of supervised learning with cross-entropy minimization. We prove that even in standard classification tasks, models learn representations of ground-truth factors of variation up to a linear transformation under a certain DGP. We corroborate our theoretical contribution with a series of empirical studies. First, using simulated data matching our theoretical assumptions, we demonstrate successful disentanglement of latent factors. Second, we show that on DisLib, a widely-used disentanglement benchmark, simple classification tasks recover latent structures up to linear transformations. Finally, we reveal that models trained on ImageNet encode representations that permit linear decoding of proxy factors of variation.Together, our theoretical findings and experiments offer a compelling explanation for recent observations of linear representations, such as superposition in neural networks. This work takes a significant step toward a cohesive theory that accounts for the unreasonable effectiveness of supervised learning.
Deep Learning · Self-Supervised Learning
Supervised learning has become a cornerstone of modern machine learning, yet a comprehensive theory explaining its effectiveness remains elusive. Empirical phenomena, such as neural analogy-making and the linear representation hypothesis, suggest that supervised models can learn interpretable factors of variation in a linear fashion. Recent advances in self-supervised learning, particularly nonlinear Independent Component Analysis, have shown that these methods can recover latent structures by inverting the data generating process. We extend these identifiability results to parametric instance discrimination, then show how insights transfer to the ubiquitous setting of supervised learning with cross-entropy minimization. We prove that even in standard classification tasks, models learn representations of ground-truth factors of variation up to a linear transformation under a certain DGP. We corroborate our theoretical contribution with a series of empirical studies. First, using simulated data matching our theoretical assumptions, we demonstrate successful disentanglement of latent factors. Second, we show that on DisLib, a widely-used disentanglement benchmark, simple classification tasks recover latent structures up to linear transformations. Finally, we reveal that models trained on ImageNet encode representations that permit linear decoding of proxy factors of variation.Together, our theoretical findings and experiments offer a compelling explanation for recent observations of linear representations, such as superposition in neural networks. This work takes a significant step toward a cohesive theory that accounts for the unreasonable effectiveness of supervised learning.
Applications · Time Series
Many time series classification tasks, where labels vary over time, are affected by label noise that also varies over time. Such noise can cause label quality to improve, worsen, or periodically change over time. We first propose and formalize temporal label noise, an unstudied problem for sequential classification of time series. In this setting, multiple labels are recorded over time while being corrupted by a time-dependent noise function. We first demonstrate the importance of modeling the temporal nature of the label noise function and how existing methods will consistently underperform. We then propose methods to train noise-tolerant classifiers by estimating the temporal label noise function directly from data. We show that our methods lead to state-of-the-art performance under diverse types of temporal label noise on real-world datasets.
Deep Learning · Graph Neural Networks
Graph Neural Networks (GNNs) are proficient in graph representation learning and achieve promising performance on versatile tasks such as node classification and link prediction.Usually, a comprehensive hyperparameter tuning is essential for fully unlocking GNN's top performance, especially for complicated tasks such as node classification on large graphs and long-range graphs. This is usually associated with high computational and time costs and careful design of appropriate search spaces. This work introduces a graph-conditioned latent diffusion framework (GNN-Diff) to generate high-performing GNNs based on the model checkpoints of sub-optimal hyperparameters selected by a light-tuning coarse search. We validate our method through 166 experiments across four graph tasks: node classification on small, large, and long-range graphs, as well as link prediction. Our experiments involve 10 classic and state-of-the-art target models and 20 publicly available datasets. The results consistently demonstrate that GNN-Diff: (1) boosts the performance of GNNs with efficient hyperparameter tuning; and (2) presents high stability and generalizability on unseen data across multiple generation runs. The code is available at https://github.com/lequanlin/GNN-Diff.
Deep Learning · Sequential Models, Time series
In time-series classification, interpretable models can bring additional insights but be outperformed by deep models since human-understandable features have limited expressivity and flexibility. In this work, we present InterpGN, a framework that integrates an interpretable model and a deep neural network. Within this framework, we introduce a novel gating function design based on the confidence of the interpretable expert, preserving interpretability for samples where interpretable features are significant while also identifying samples that require additional expertise. For the interpretable expert, we incorporate shapelets to effectively model shape-level features for time-series data. We introduce a variant of Shapelet Transforms to build logical predicates using shapelets. Our proposed model achieves comparable performance with state-of-the-art deep learning models while additionally providing interpretable classifiers for various benchmark datasets. We further show that our models improve on quantitative shapelet quality and interpretability metrics over existing shapelet-learning formulations. Finally, we show that our models can integrate additional advanced architectures and be applied to real-world tasks beyond standard benchmarks such as the MIMIC-III and time series extrinsic regression datasets.
Conditional Neural Fields (CNFs) are increasingly being leveraged as continuous signal representations, by associating each data-sample with a latent variable that conditions a shared backbone Neural Field (NeF) to reconstruct the sample. However, existing CNF architectures face limitations when using this latent downstream in tasks requiring fine-grained geometric reasoning, such as classification and segmentation. We posit that this results from lack of explicit modelling of geometric information (e.g. locality in the signal or the orientation of a feature) in the latent space of CNFs. As such, we propose Equivariant Neural Fields (ENFs), a novel CNF architecture which uses a geometry-informed cross-attention to condition the NeF on a geometric variable—a latent point cloud of features—that enables an equivariant decoding from latent to field. We show that this approach induces a steerability property by which both field and latent are grounded in geometry and amenable to transformation laws: if the field transforms, the latent representation transforms accordingly—and vice versa. Crucially, this equivariance relation ensures that the latent is capable of (1) representing geometric patterns faitfhully, allowing for geometric reasoning in latent space, (2) weight-sharing over similar local patterns, allowing for efficient learning of datasets of fields. We validate these main properties in a range of tasks including classification, segmentation, forecasting, reconstruction and generative modelling, showing clear improvement over baselines with a geometry-free latent space.
Social Aspects · Accountability, Transparency and Interpretability
Advancements in foundation models (FMs) have led to a paradigm shift in machinelearning. The rich, expressive feature representations from these pre-trained, large-scale FMs are leveraged for multiple downstream tasks, usually via lightweightfine-tuning of a shallow fully-connected network following the representation.However, the non-interpretable, black-box nature of this prediction pipeline can bea challenge, especially in critical domains, such as healthcare, finance, and security.In this paper, we explore the potential of Concept Bottleneck Models (CBMs)for transforming complex, non-interpretable foundation models into interpretabledecision-making pipelines using high-level concept vectors. Specifically, we focuson the test-time deployment of such an interpretable CBM pipeline “in the wild”,where the distribution of inputs often shifts from the original training distribution.We first identify the potential failure modes of such pipelines under different typesof distribution shifts. Then we propose an adaptive concept bottleneck frameworkto address these failure modes, that dynamically adapts the concept-vector bankand the prediction layer based solely on unlabeled data from the target domain,without access to the source dataset. Empirical evaluations with various real-worlddistribution shifts show our framework produces concept-based interpretationsbetter aligned with the test data and boosts post-deployment accuracy by up to28%, aligning CBM performance with that of non-interpretable classification.
Deep Learning · Robustness
Adapting a pre-trained foundation model on downstream tasks should ensure robustness against distribution shifts without the need to retrain the whole model. Although existing weight interpolation methods are simple yet effective, we argue their static nature limits downstream performance while achieving efficiency. In this work, we propose DaWin, a training-free dynamic weight interpolation method that leverages the entropy of individual models over each unlabeled test sample to assess model expertise, and compute per-sample interpolation coefficients dynamically. Unlike previous works that typically rely on additional training to learn such coefficients, our approach requires no training. Then, we propose a mixture modeling approach that greatly reduces inference overhead raised by dynamic interpolation. We validate DaWin on the large-scale visual recognition benchmarks, spanning 14 tasks across robust fine-tuning -- ImageNet and derived five distribution shift benchmarks -- and multi-task learning with eight classification tasks. Results demonstrate that DaWin achieves significant performance gain in considered settings, with minimal computational overhead. We further discuss DaWin's analytic behavior to explain its empirical success.
Multi-modal models, such as CLIP, have demonstrated strong performance in aligning visual and textual representations, excelling in tasks like image retrieval and zero-shot classification. Despite this success, the mechanisms by which these models utilize training data, particularly the role of memorization, remain unclear. In uni-modal models, both supervised and self-supervised, memorization has been shown to be essential for generalization. However, it is not well understood how these findings would apply to CLIP, which incorporates elements from both supervised learning via captions that provide a supervisory signal similar to labels, and from self-supervised learning via the contrastive objective.To bridge this gap in understanding, we propose a formal definition of memorization in CLIP (CLIPMem) and use it to quantify memorization in CLIP models. Our results indicate that CLIP’s memorization behavior falls between the supervised and self-supervised paradigms, with "mis-captioned" samples exhibiting highest levels of memorization. Additionally, we find that the text encoder contributes more to memorization than the image encoder, suggesting that mitigation strategies should focus on the text domain. Building on these insights, we propose multiple strategies to reduce memorization while at the same time improving utility---something that had not been shown before for traditional learning paradigms where reducing memorization typically results in utility decrease.
Reinforcement Learning · Everything Else
Process Reward Modeling (PRM) is critical for complex reasoning and decision-making tasks where the accuracy of intermediate steps significantly influences the overall outcome. Existing PRM approaches, primarily framed as classification problems, employ cross-entropy loss to independently evaluate each step's correctness. This method can lead to suboptimal reward distribution and does not adequately address the interdependencies among steps. To address these limitations, we introduce the Process Q-value Model (PQM), a novel framework that redefines PRM in the context of a Markov Decision Process. PQM optimizes Q-value rankings based on a novel comparative loss function, enhancing the model's ability to capture the intricate dynamics among sequential decisions. This approach provides a more granular and theoretically grounded methodology for process rewards. Our extensive empirical evaluations across various sampling policies, language model backbones, and multi-step reasoning benchmarks show that PQM outperforms classification-based PRMs. The effectiveness of the comparative loss function is highlighted in our comprehensive ablation studies, confirming PQM’s practical efficacy and theoretical advantage.