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Applications · Neuroscience, Cognitive Science

Ethan Trepka, Ruobing Xia, Shude Zhu, Sharif Saleki, Danielle Lopes, Stephen Cital, Konstantin Willeke, Mindy Kim, Tirin Moore

The primate visual system is typically divided into two streams — the ventral stream, responsible for object recognition, and the dorsal stream, responsible for encoding spatial relations and motion. Recent studies have shown that convolutional neural networks (CNNs) pretrained on object recognition tasks are remarkably effective at predicting neuronal responses in the ventral stream, shedding light on the neural mechanisms underlying object recognition. However, similar models of the dorsal stream remain underdeveloped due to the lack of large scale datasets encompassing dorsal stream areas. To address this gap, we present STSBench, a dataset of large-scale, single neuron recordings from over 2,000 neurons in the superior temporal sulcus (STS), a nearly 50-fold increase over existing dorsal stream datasets, collected while Rhesus macaques viewed thousands of unique, natural videos. We show that our dataset can be used for benchmarking encoding models of dorsal stream neuronal responses and reconstructing visual input from neural activity.

Applications · Neuroscience, Cognitive Science

Xiaojun Ning, Jing Wang, Zhiyang Feng, Tianzuo Xin, Shuo Zhang, Shaoqi Zhang, Zheng Lian, Yi Ding, Youfang Lin, Ziyu Jia

Affective brain-computer interfaces (aBCIs) play a crucial role in personalized human–computer interaction and neurofeedback modulation. To develop practical and effective aBCI paradigms and to investigate the spatial-temporal dynamics of brain activity under emotional inducement, portable electroencephalography (EEG) signals have been widely adopted. To further enhance spatial-temporal perception, functional near-infrared spectroscopy (fNIRS) has attracted increasing interest in the aBCI field and has been explored in combination with EEG. However, existing datasets typically provide only static fixation labels, overlooking the dynamic changes in subjects' emotions. Notably, some studies have attempted to collect continuously annotated emotional data, but they have recorded only peripheral physiological signals without directly observing brain activity, limiting insight into underlying neural states under different emotions. To address these challenges, we present the Real-time labeled EEG-fNIRS Dataset (REFED). To the best of our knowledge, this is the first EEG-fNIRS dataset with real-time dynamic emotional annotations. REFED simultaneously records brain signals from both EEG and fNIRS modalities while providing continuous, real-time annotations of valence and arousal. The results of the data analysis demonstrate the effectiveness of emotion inducement and the reliability of real-time annotation. This dataset offers the possibility for studying the neurovascular coupling mechanism under emotional evolution and for developing dynamic, robust affective BCIs.

Applications · Neuroscience, Cognitive Science

A Sağtekin, Colin Bredenberg, Cristina Savin

How should feedback influence recurrent neural network (RNN) learning? One way to address the known limitations of backpropagation through time is to directly adjust neural activities during the learning process. However, it remains unclear how to effectively use feedback to shape RNN dynamics. Here, we introduce error forcing (EF), where the network activity is guided orthogonally toward the zero-error manifold during learning. This method contrasts with alternatives like teaching forcing, which impose stronger constraints on neural activity and thus induce larger feedback influence on circuit dynamics. Furthermore, EF can be understood from a Bayesian perspective as a form of approximate dynamic inference. Empirically, EF consistently outperforms other learning algorithms across several tasks and its benefits persist when additional biological constraints are taken into account. Overall, EF is a powerful temporal credit assignment mechanism and a promising candidate model for learning in biological systems.

Applications · Neuroscience, Cognitive Science

Ling Zhan, Junjie Huang, Xiaoyao Yu, Wenyu Chen, Tao Jia

Functional brain network (FBN) modeling often relies on local pairwise interactions, whose limitation in capturing high-order dependencies is theoretically analyzed in this paper. Meanwhile, the computational burden and heuristic nature of current hypergraph modeling approaches hinder end-to-end learning of FBN structures directly from data distributions. To address this, we propose to extract high-order FBN structures under global constraints, and implement this as a Global Constraints oriented Multi-resolution (GCM) FBN structure learning framework. It incorporates 4 types of global constraint (signal synchronization, subject identity, expected edge numbers, and data labels) to enable learning FBN structures for 4 distinct levels (sample/subject/group/project) of modeling resolution. Experimental results demonstrate that GCM achieves up to a 30.6% improvement in relative accuracy and a 96.3% reduction in computational time across 5 datasets and 2 task settings, compared to 9 baselines and 10 state-of-the-art methods. Extensive experiments validate the contributions of individual components and highlight the interpretability of GCM. This work offers a novel perspective on FBN structure learning and provides a foundation for interdisciplinary applications in cognitive neuroscience. Code is publicly available on https://github.com/lzhan94swu/GCM.

Applications · Neuroscience, Cognitive Science

Yangxuan Zhou, Sha Zhao, Jiquan Wang, Haiteng Jiang, Shijian Li, Tao Li, Gang Pan

Human brain achieves dynamic stability-plasticity balance through synaptic homeostasis, a self-regulatory mechanism that stabilizes critical memory traces while preserving optimal learning capacities. Inspired by this biological principle, we propose SPICED: a neuromorphic framework that integrates the synaptic homeostasis mechanism for unsupervised continual EEG decoding, particularly addressing practical scenarios where new individuals with inter-individual variability emerge continually. SPICED comprises a novel synaptic network that enables dynamic expansion during continual adaptation through three bio-inspired neural mechanisms: (1) critical memory reactivation, which mimics brain functional specificity, selectively activates task-relevant memories to facilitate adaptation; (2) synaptic consolidation, which strengthens these reactivated critical memory traces and enhances their replay prioritizations for further adaptations and (3) synaptic renormalization, which are periodically triggered to weaken global memory traces to preserve learning capacities. The interplay within synaptic homeostasis dynamically strengthens task-discriminative memory traces and weakens detrimental memories. By integrating these mechanisms with continual learning system, SPICED preferentially replays task-discriminative memory traces that exhibit strong associations with newly emerging individuals, thereby achieving robust adaptations. Meanwhile, SPICED effectively mitigates catastrophic forgetting by suppressing the replay prioritization of detrimental memories during long-term continual learning. Validated on three EEG datasets, SPICED show its effectiveness. More importantly, SPICED bridges biological neural mechanisms and artificial intelligence through synaptic homeostasis, providing insights into the broader applicability of bio-inspired principles.

Reinforcement Learning · Everything Else

boheng liu, Ziyu Li, Chenghua Duan, YuTian Liu, Zhuo Wang, Xiuxing Li, Qing Li, Xia Wu

Open-world reinforcement learning challenges agents to develop intelligent behavior in vast exploration spaces. Recent approaches like LS-Imagine have advanced the field by extending imagination horizons through jumpy state transitions, yet remain limited by fixed exploration mechanisms and static jump thresholds that cannot adapt across changing task phases, resulting in inefficient exploration and lower completion rates. Humans demonstrate remarkable capabilities in open-world decision-making through a chain-like process of task decomposition, selective memory utilization, and adaptive uncertainty regulation. Inspired by human decision-making processes, we present Cognitive Predictive Processing (CPP), a novel framework that integrates three neurologically-inspired systems: a phase-adaptive cognitive controller that dynamically decomposes tasks into exploration, approach, and completion phases with adaptive parameters; a dual-memory integration system implementing dual-modal memory that balances immediate context with selective long-term storage; and an uncertainty-modulated prediction regulator that continuously updates environmental predictions to modulate exploration behavior. Comprehensive experiments in MineDojo demonstrate that these human-inspired decision-making strategies enhance performance over recent techniques, with success rates improving by an average of 4.6\% across resource collection tasks while reducing task completion steps by an average of 7.1\%. Our approach bridges cognitive neuroscience and reinforcement learning, excelling in complex scenarios that require sustained exploration and strategic adaptation while demonstrating how neural-inspired models can solve key challenges in open-world AI systems.

Applications · Neuroscience, Cognitive Science

Tony Yousefnezhad

Task-based functional magnetic resonance imaging (fMRI) provides invaluable insights into human cognition but faces critical hurdles—low signal-to-noise ratio, high dimensionality, limited sample sizes, and costly data acquisition—that are amplified when integrating datasets across subjects or sites. This paper introduces orthogonal contrastive learning (OCL), a unified multi-representation framework for multi-subject fMRI analysis that aligns neural responses without requiring temporal preprocessing or uniform time-series lengths across subjects or sites. OCL employs two identical encoders: an online network trained with a contrastive loss that pulls together same-stimulus responses and pushes apart different-stimulus responses, and a target network whose weights track the online network via exponential moving average to stabilize learning. Each OCL network layer combines QR decomposition for orthogonal feature extraction, locality-sensitive hashing (LSH) to produce compact subject-specific signatures, positional encoding to embed temporal structure alongside spatial features, and a transformer encoder to generate discriminative, stimulus-aligned embeddings. We further enhance OCL with an unsupervised pretraining stage on fMRI-like synthetic data and demonstrate a transfer-learning workflow for multi-site studies. Across extensive experiments on multi-subject and multi-site fMRI benchmarks, OCL consistently outperforms state-of-the-art alignment and analysis methods in both representation quality and downstream classification accuracy.

Applications · Neuroscience, Cognitive Science

Jia Nuo Liew, Shenghan Lin, Bowen Chen, Wei Zhang, Xiaowei Zhu, Wei Zhang, Xiaolin Hu

The ability to extract oriented edges from visual input is a core computation across animal vision systems. Orientation maps, long associated with the layered architecture of the mammalian visual cortex, systematically organise neurons by their preferred edge orientation. Despite lacking cortical structures, the *Drosophila melanogaster* brain contains feature-selective neurons and exhibits complex visual detection capacity, raising the question of whether map-like vision representations can emerge without cortical infrastructure. We integrate a complete fruit fly brain connectome with biologically grounded spiking neuron models to simulate neuroprocessing in the fly visual system. By driving the network with oriented stimuli and analysing downstream responses, we show that coherent orientation maps can emerge from purely connectome-constrained dynamics. These results suggest that species of independent origin could evolve similar visual structures.

Applications · Neuroscience, Cognitive Science

Shihao Zou, Qingfeng Li, Wei Ji, Jingjing Li, Yongkui Yang, Guoqi Li, Chao Dong

Spiking Neural Networks (SNNs) have shown competitive performance to Artificial Neural Networks (ANNs) in various vision tasks, while offering superior energy efficiency. However, existing SNN-based Transformers primarily focus on single-image tasks, emphasizing spatial features while not effectively leveraging SNNs' efficiency in video-based vision tasks. In this paper, we introduce SpikeVideoFormer, an efficient spike-driven video Transformer, featuring linear temporal complexity $\mathcal{O}(T)$. Specifically, we design a spike-driven Hamming attention (SDHA) which provides a theoretically guided adaptation from traditional real-valued attention to spike-driven attention. Building on SDHA, we further analyze various spike-driven space-time attention designs and identify an optimal scheme that delivers appealing performance for video tasks, while maintaining only linear temporal complexity. The generalization ability and efficiency of our model are demonstrated across diverse downstream video tasks, including classification, human pose tracking, and semantic segmentation. Empirical results show our method achieves state-of-the-art (SOTA) performance compared to existing SNN approaches, with over 15\% improvement on the latter two tasks. Additionally, it matches the performance of recent ANN-based methods while offering significant efficiency gains, achieving $\times 16$, $\times 10$ and $\times 5$ improvements on the three tasks. [https://github.com/JimmyZou/SpikeVideoFormer](https://github.com/JimmyZou/SpikeVideoFormer)

Applications · Neuroscience, Cognitive Science

Sam Gijsen, Kerstin Ritter

Multimodal language modeling has enabled breakthroughs for representation learning, yet remains unexplored in the realm of functional brain data for clinical phenotyping. This paper pioneers EEG-language models (ELMs) trained on clinical reports and 15000 EEGs. We propose to combine multimodal alignment in this novel domain with timeseries cropping and text segmentation, enabling an extension based on multiple instance learning to alleviate misalignment between irrelevant EEG or text segments. Our multimodal models significantly improve over EEG-only models across four clinical evaluations and for the first time enable zero-shot classification as well as retrieval of both neural signals and reports. In sum, these results highlight the potential of ELMs, representing significant progress for clinical applications.

Applications · Neuroscience, Cognitive Science

Yuhan Helena Liu, Guangyu Robert Yang, Christopher Cueva

Understanding how the brain learns may be informed by studying biologically plausible learning rules. These rules, often approximating gradient descent learning to respect biological constraints such as locality, must meet two critical criteria to be considered an appropriate brain model: (1) good neuroscience task performance and (2) alignment with neural recordings. While extensive research has assessed the first criterion, the second remains underexamined. Employing methods such as Procrustes analysis on well-known neuroscience datasets, this study demonstrates the existence of a biologically plausible learning rule — namely e-prop, which is based on gradient truncation and has demonstrated versatility across a wide range of tasks — that can achieve neural data similarity comparable to Backpropagation Through Time (BPTT) when matched for task accuracy. Our findings also reveal that model architecture and initial conditions can play a more significant role in determining neural similarity than the specific learning rule. Furthermore, we observe that BPTT-trained models and their biologically plausible counterparts exhibit similar dynamical properties at comparable accuracies. These results underscore the substantial progress made in developing biologically plausible learning rules, highlighting their potential to achieve both competitive task performance and neural data similarity.

Applications · Neuroscience, Cognitive Science

Zecheng Hao, Qichao Ma, Kang Chen, Yi Zhang, Zhaofei Yu, Tiejun Huang

Spiking Neural Network (SNN), as a brain-inspired and energy-efficient network, is currently facing the pivotal challenge of exploring a suitable and efficient learning framework. The predominant training methodologies, namely Spatial-Temporal Back-propagation (STBP) and ANN-SNN Conversion, are encumbered by substantial training overhead or pronounced inference latency, which impedes the advancement of SNNs in scaling to larger networks and navigating intricate application domains. In this work, we propose a novel parallel conversion learning framework, which establishes a mathematical mapping relationship between each time-step of the parallel spiking neurons and the cumulative spike firing rate. We theoretically validate the lossless and sorting properties of the conversion process, as well as pointing out the optimal shifting distance for each step. Furthermore, by integrating the above framework with the distribution-aware error calibration technique, we can achieve efficient conversion towards more general activation functions or training-free circumstance. Extensive experiments have confirmed the significant performance advantages of our method for various conversion cases under ultra-low time latency. To our best knowledge, this is the first work which jointly utilizes parallel spiking calculation and ANN-SNN Conversion, providing a highly promising approach for SNN supervised training. Code is available at https://github.com/hzc1208/Parallel_Conversion.

Applications · Neuroscience, Cognitive Science

Yu Liang, Yu Yang, Wenjie Wei, Ammar Belatreche, Shuai Wang, Malu Zhang, Yang Yang

Binary Spiking Neural Networks (BSNNs) offer promising efficiency advantages for resource-constrained computing. However, their training algorithms often require substantial memory overhead due to latent weights storage and temporal processing requirements. To address this issue, we propose Binary Spiking Online (BSO) optimization algorithm, a novel online training algorithm that significantly reduces training memory. BSO directly updates weights through flip signals under the online training framework. These signals are triggered when the product of gradient momentum and weights exceeds a threshold, eliminating the need for latent weights during training. To enhance performance, we propose T-BSO, a temporal-aware variant that leverages the inherent temporal dynamics of BSNNs by capturing gradient information across time steps for adaptive threshold adjustment. Theoretical analysis establishes convergence guarantees for both BSO and T-BSO, with formal regret bounds characterizing their convergence rates. Extensive experiments demonstrate that both BSO and T-BSO achieve superior optimization performance compared to existing training methods for BSNNs. The codes are available at \url{https://github.com/hamingsi/BSO}.

Applications · Neuroscience, Cognitive Science

Yu Zhu, Chunfeng Song, Wanli Ouyang, Shan Yu, Tiejun Huang

Individual brains exhibit striking structural and physiological heterogeneity, yet neural circuits can generate remarkably consistent functional properties across individuals, an apparent paradox in neuroscience. While recent studies have observed preserved neural representations in motor cortex through manual alignment across subjects, the zero-shot validation of such preservation and its generalization to more cortices remain unexplored. Here we present PNBA (Probabilistic Neural-Behavioral Representation Alignment), a new framework that leverages probabilistic modeling to address hierarchical variability across trials, sessions, and subjects, with generative constraints preventing representation degeneration. By establishing reliable cross-modal representational alignment, PNBA reveals robust preserved neural representations in monkey primary motor cortex (M1) and dorsal premotor cortex (PMd) through zero-shot validation. We further establish similar representational preservation in mouse primary visual cortex (V1), reflecting a general neural basis. These findings resolve the paradox of neural heterogeneity by establishing zero-shot preserved neural representations across cortices and species, enriching neural coding insights and enabling zero-shot behavior decoding.

Applications · Neuroscience, Cognitive Science

jiayue Liu, Zhongchao Yi, Zhengyang Zhou, Qihe Huang, Kuo Yang, Xu Wang, Yang Wang

Discovering regularities from spatiotemporal systems can benefit various scientific and social planning. Current spatiotemporal learners usually train an independent model from a specific source data that leads to limited transferability among sources, where even correlated tasks requires new design and training. The key towards increasing cross-domain knowledge is to enable collective intelligence and model evolution. In this paper, inspired by neuroscience theories, we theoretically derive the increased information boundary via learning cross-domain collective intelligence and propose a Synaptic EVOlutional spatiotemporal network, SynEVO, where SynEVO breaks the model independence and enables cross-domain knowledge to be shared and aggregated. Specifically, we first re-order the sample groups to imitate the human curriculum learning, and devise two complementary learners, elastic common container and task-independent extractor to allow model growth and task-wise commonality and personality disentanglement. Then an adaptive dynamic coupler with a new difference metric determines whether the new sample group should be incorporated into common container to achieve model evolution under various domains. Experiments show that SynEVO improves the generalization capacity by at most 42\% under cross-domain scenarios and SynEVO provides a paradigm of NeuroAI for knowledge transfer and adaptation.Code available at [https://github.com/Rodger-Lau/SynEVO](https://github.com/Rodger-Lau/SynEVO).

Applications · Neuroscience, Cognitive Science

Songlin Xu, Xinyu Zhang

Using deep neural networks as computational models to simulate cognitive processes can provide key insights into human behavioral dynamics. Challenges arise when environments are highly dynamic, obscuring stimulus-behavior relationships. However, the majority of current research focuses on simulating human cognitive behaviors under ideal conditions, neglecting the influence of environmental disturbances. We propose CogReact, which integrates drift-diffusion with deep reinforcement learning to simulate granular effects of dynamic environmental stimuli on the human cognitive process. Quantitatively, it improves cognition modeling by considering the temporal effect of environmental stimuli on the cognitive process and captures both subject-specific and stimuli-specific behavioral differences. Qualitatively, it captures general trends in the human cognitive process under stimuli. We examine our approach under diverse environmental influences across various cognitive tasks. Overall, it demonstrates a powerful, data-driven methodology to simulate, align with, and understand the vagaries of human cognitive response in dynamic contexts.

Applications · Neuroscience, Cognitive Science

Changze Lv, Jingwen Xu, Yiyang Lu, Xiaohua Wang, Zhenghua Wang, Zhibo Xu, Di Yu, Xin Du, Xiaoqing Zheng, Xuanjing Huang

Backpropagation is the foundational algorithm for training neural networks and a key driver of deep learning's success.However, its biological plausibility has been challenged due to three primary limitations: weight symmetry, reliance on global error signals, and the dual-phase nature of training, as highlighted by the existing literature. Although various alternative learning approaches have been proposed to address these issues, most either fail to satisfy all three criteria simultaneously or yield suboptimal results.Inspired by the dynamics and plasticity of pyramidal neurons, we propose Dendritic Localized Learning (DLL), a novel learning algorithm designed to overcome these challenges.Extensive empirical experiments demonstrate that DLL satisfies all three criteria of biological plausibility while achieving state-of-the-art performance among algorithms that meet these requirements.Furthermore, DLL exhibits strong generalization across a range of architectures, including MLPs, CNNs, and RNNs.These results, benchmarked against existing biologically plausible learning algorithms, offer valuable empirical insights for future research.We hope this study can inspire the development of new biologically plausible algorithms for training multilayer networks and advancing progress in both neuroscience and machine learning.Our code is available at https://github.com/Lvchangze/Dendritic-Localized-Learning.

Applications · Neuroscience, Cognitive Science

Weiyu Guo, Ziyue Qiao, Ying Sun, Yijie Xu, Hui Xiong

Gesture recognition based on surface electromyography (sEMG) has been gaining importance in many 3D Interactive Scenes. However, sEMG is easily influenced by various forms of noise in real-world environments, leading to challenges in providing long-term stable interactions through sEMG. Existing methods often struggle to enhance model noise resilience through various predefined data augmentation techniques.In this work, we revisit the problem from a short-term enhancement perspective to improve precision and robustness against various common noisy scenarios with learnable denoise using sEMG intrinsic pattern information and sliding-window attention. We propose a Short Term Enhancement Module(STEM), which can be easily integrated with various models. STEM offers several benefits: 1) Noise-resistant, enhanced robustness against noise without manual data augmentation; 2) Adaptability, adaptable to various models; and 3) Inference efficiency, achieving short-term enhancement through minimal weight-sharing in an efficient attention mechanism.In particular, we incorporate STEM into a transformer, creating the Short-Term Enhanced Transformer (STET).Compared with best-competing approaches, the impact of noise on STET is reduced by more than 20\%. We report promising results on classification and regression tasks and demonstrate that STEM generalizes across different gesture recognition tasks. The code is available at https://anonymous.4open.science/r/short_term_semg.

Applications · Neuroscience, Cognitive Science

chang liu, Jiangrong Shen, Xuming Ran, Mingkun Xu, Qi Xu, Yi Xu, Gang Pan

Artificial neural networks (ANNs) have demonstrated outstanding performance in numerous tasks, but deployment in resource-constrained environments remains a challenge due to their high computational and memory requirements. Spiking neural networks (SNNs) operate through discrete spike events and offer superior energy efficiency, providing a bio-inspired alternative. However, current ANN-to-SNN conversion often results in significant accuracy loss and increased inference time due to conversion errors such as clipping, quantization, and uneven activation. This paper proposes a novel ANN-to-SNN conversion framework based on error compensation learning. We introduce a learnable threshold clipping function, dual-threshold neurons, and an optimized membrane potential initialization strategy to mitigate the conversion error. Together, these techniques address the clipping error through adaptive thresholds, dynamically reduce the quantization error through dual-threshold neurons, and minimize the non-uniformity error by effectively managing the membrane potential. Experimental results on CIFAR-10, CIFAR-100, ImageNet datasets show that our method achieves high-precision and ultra-low latency among existing conversion methods. Using only two time steps, our method significantly reduces the inference time while maintains competitive accuracy of 94.75% on CIFAR-10 dataset under ResNet-18 structure. This research promotes the practical application of SNNs on low-power hardware, making efficient real-time processing possible.

Applications · Neuroscience, Cognitive Science

Weikang Qiu, Zheng Huang, Haoyu Hu, Aosong Feng, Yujun Yan, ZHITAO YING

Decoding functional magnetic resonance imaging (fMRI) signals into text has been a key challenge in the neuroscience community, with the potential to advance brain-computer interfaces and uncover deeper insights into brain mechanisms. However, existing approaches often struggle with suboptimal predictive performance, limited task variety, and poor generalization across subjects. In response to this, we propose MindLLM, a model designed for subject-agnostic and versatile fMRI-to-text decoding. MindLLM consists of an fMRI encoder and an off-the-shelf LLM. The fMRI encoder employs a neuroscience-informed attention mechanism, which is capable of accommodating subjects with varying input shapes and thus achieves high-performance subject-agnostic decoding. Moreover, we introduce Brain Instruction Tuning (BIT), a novel approach that enhances the model's ability to capture diverse semantic representations from fMRI signals, facilitating more versatile decoding. We evaluate MindLLM on comprehensive fMRI-to-text benchmarks. Results demonstrate that our model outperforms the baselines, improving downstream tasks by $12.0\%$, unseen subject generalization by $24.5\%$, and novel task adaptation by $25.0\%$. Furthermore, the attention patterns in MindLLM provide interpretable insights into its decision-making process.