论文检索

Deep Learning · Graph Neural Networks

Shuo Wang, Bokui Wang, Zhixiang Shen, Boyan Deng, zhao kang

Recent advances in CV and NLP have inspired researchers to develop general-purpose graph foundation models through pre-training across diverse domains. However, a fundamental challenge arises from the substantial differences in graph topologies across domains. Additionally, real-world graphs are often sparse and prone to noisy connections and adversarial attacks. To address these issues, we propose the Multi-Domain Graph Foundation Model (MDGFM), a unified framework that aligns and leverages cross-domain topological information to facilitate robust knowledge transfer. MDGFM bridges different domains by adaptively balancing features and topology while refining original graphs to eliminate noise and align topological structures. To further enhance knowledge transfer, we introduce an efficient prompt-tuning approach. By aligning topologies, MDGFM not only improves multi-domain pre-training but also enables robust knowledge transfer to unseen domains. Theoretical analyses provide guarantees of MDGFM's effectiveness and domain generalization capabilities. Extensive experiments on both homophilic and heterophilic graph datasets validate the robustness and efficacy of our method.

Applications · Computer Vision

Yabo Liu, Waikeung Wong, Chengliang Liu, Xiaoling Luo, Yong Xu, Jinghua Wang

Segment Anything Model (SAM) has demonstrated remarkable zero-shot segmentation capabilities across various visual tasks. However, its performance degrades significantly when deployed in new target domains with substantial distribution shifts. While existing self-training methods based on fixed teacher-student architectures have shown improvements, they struggle to ensure that the teacher network consistently outperforms the student under severe domain shifts. To address this limitation, we propose a novel Collaborative Mutual Learning Framework for source-free SAM adaptation, leveraging dual-networks in a dynamic and cooperative manner. Unlike fixed teacher-student paradigms, our method dynamically assigns the teacher and student roles by evaluating the reliability of each collaborative network in each training iteration. Our framework incorporates a dynamic mutual learning mechanism with three key components: a direct alignment loss for knowledge transfer, a reverse distillation loss to encourage diversity, and a triplet relationship loss to refine feature representations. These components enhance the adaptation capabilities of the collaborative networks, enabling them to generalize effectively to target domains while preserving their pre-trained knowledge. Extensive experiments on diverse target domains demonstrate that our proposed framework achieves state-of-the-art adaptation performance.

General Machine Learning · Transfer, Multitask and Meta-learning

Linjing You, Jiabao Lu, Xiayuan Huang

Deep neural networks often degrade under distribution shifts. Although domain adaptation offers a solution, privacy constraints often prevent access to source data, making Test-Time Adaptation (TTA)—which adapts using only unlabeled test data—increasingly attractive. However, current TTA methods still face practical challenges: (1) a primary focus on instance-wise alignment, overlooking CORrelation ALignment (CORAL) due to missing source correlations; (2) complex backpropagation operations for model updating, resulting in overhead computation and (3) domain forgetting. To address these challenges, we provide a theoretical analysis to investigate the feasibility of **T**est-time **C**orrelation **A**lignment (**TCA**), demonstrating that correlation alignment between high-certainty instances and test instances can enhance test performances with a theoretical guarantee. Based on this, we propose two simple yet effective algorithms: LinearTCA and LinearTCA+. LinearTCA applies a simple linear transformation to achieve both instance and correlation alignment without additional model updates, while LinearTCA+ serves as a plug-and-play module that can easily boost existing TTA methods. Extensive experiments validate our theoretical insights and show that TCA methods significantly outperforms baselines across various tasks, benchmarks and backbones. Notably, LinearTCA achieves higher accuracy with only 4\% GPU memory and 0.6\% computation time compared to the best TTA baseline. It also outperforms existing methods on CLIP over 1.86\%. Code: https://github.com/youlj109/TCA

General Machine Learning · Transfer, Multitask and Meta-learning

Tuan Truong, Chau Nguyen, Huy Nguyen, Minh Le, Trung Le, Nhat Ho

Low-rank Adaptation (LoRA) has emerged as a powerful and efficient method for fine-tuning large-scale foundation models. Despite its popularity, the theoretical understanding of LoRA has remained underexplored. In this paper, we present a theoretical analysis of LoRA by examining its connection to the Mixture of Experts models. Under this framework, we show that a simple technique, reparameterizing LoRA matrices, can notably accelerate the low-rank matrix estimation process. In particular, we prove that reparameterization can reduce the data needed to achieve a desired estimation error from an exponential to a polynomial scale. Motivated by this insight, we propose **Rep**arameterized **Lo**w-**R**ank **A**daptation (RepLoRA), incorporating a lightweight MLP to reparameterize the LoRA matrices. Extensive experiments across multiple domains demonstrate that RepLoRA consistently outperforms vanilla LoRA. With limited data, RepLoRA surpasses LoRA by a substantial margin of up to **40.0%** and achieves LoRA's performance using only **30.0%** of the training data, highlighting the theoretical and empirical robustness of our PEFT method.

Reinforcement Learning

Yun Hua, Haosheng Chen, Wenhao Li, Bo Jin, Baoxiang Wang, Hongyuan Zha, Xiangfeng Wang

Addressing reward design complexities in deep reinforcement learning is facilitated by knowledge transfer across different domains. To this end, we define \textit{reward translation} to describe the cross-domain reward transfer problem. However, current methods struggle with non-pairable and non-time-alignable incompatible MDPs.This paper presents an adaptable reward translation framework \textit{neural reward translation} featuring \textit{semi-alignable MDPs}, which allows efficient reward translation under relaxed constraints while handling the intricacies of incompatible MDPs. Given the inherent difficulty of directly mapping semi-alignable MDPs and transferring rewards, we introduce an indirect mapping method through reward machines, created using limited human input or LLM-based automated learning.Graph-matching techniques establish links between reward machines from distinct environments, thus enabling cross-domain reward translation within semi-alignable MDP settings. This broadens the applicability of DRL across multiple domains. Experiments substantiate our approach's effectiveness in tasks under environments with semi-alignable MDPs.

Applications · Computer Vision

Yuanhong Zhang, Muyao Yuan, Weizhan Zhang, Tieliang Gong, Wen Wen, Jiangyong Ying, Weijie Shi

The Segment Anything Model (SAM), a vision foundation model, exhibits impressive zero-shot capabilities in general tasks but struggles in specialized domains. Parameter-efficient fine-tuning (PEFT) is a promising approach to unleash the potential of SAM in novel scenarios. However, existing PEFT methods for SAM neglect the domain-invariant relations encoded in the pre-trained model. To bridge this gap, we propose InfoSAM, an information-theoretic approach that enhances SAM fine-tuning by distilling and preserving its pre-trained segmentation knowledge. Specifically, we formulate the knowledge transfer process as two novel mutual information-based objectives: (i) to compress the domain-invariant relation extracted from pre-trained SAM, excluding pseudo-invariant information as possible, and (ii) to maximize mutual information between the relational knowledge learned by the teacher (pre-trained SAM) and the student (fine-tuned model). The proposed InfoSAM establishes a robust distillation framework for PEFT of SAM. Extensive experiments across diverse benchmarks validate InfoSAM's effectiveness in improving SAM family's performance on real-world tasks, demonstrating its adaptability and superiority in handling specialized scenarios. The code and models are available at https://muyaoyuan.github.io/InfoSAM_Page.

Theory · Domain Adaptation and Transfer Learning

Abhra Chaudhuri, Anjan Dutta, Tu Bui, Serban Georgescu

We aim to develop a fundamental understanding of modality collapse, a recently observed empirical phenomenon wherein models trained for multimodal fusion tend to rely only on a subset of the modalities, ignoring the rest. We show that modality collapse happens when noisy features from one modality are entangled, via a shared set of neurons in the fusion head, with predictive features from another, effectively masking out positive contributions from the predictive features of the former modality and leading to its collapse. We further prove that cross-modal knowledge distillation implicitly disentangles such representations by freeing up rank bottlenecks in the student encoder, denoising the fusion-head outputs without negatively impacting the predictive features from either modality. Based on the above findings, we propose an algorithm that prevents modality collapse through explicit basis reallocation, with applications in dealing with missing modalities. Extensive experiments on multiple multimodal benchmarks validate our theoretical claims. Project page: https://abhrac.github.io/mmcollapse/.

Theory · Domain Adaptation and Transfer Learning

Akhil Jalan, Yassir Jedra, Arya Mazumdar, Soumendu Sundar Mukherjee, Purnamrita Sarkar

We study transfer learning for matrix completion in a Missing Not-at-Random (MNAR) setting that is motivated by biological problems. The target matrix $Q$ has entire rows and columns missing, making estimation impossible without side information. To address this, we usea noisy and incomplete source matrix $P$, which relates to $Q$ via a feature shift in latent space. We consider both the *active* and *passive* sampling of rows and columns. We establish minimax lower bounds for entrywise estimation error in each setting. Our computationally efficient estimation framework achieves this lower bound for the active setting, which leverages the source data to query the most informative rows and columns of $Q$. This avoids the need for *incoherence* assumptions required for rate optimality in the passive sampling setting. We demonstrate the effectiveness of our approach through comparisons with existing algorithms on real-world biological datasets.

General Machine Learning · Transfer, Multitask and Meta-learning

Yongxian Wei, Anke Tang, Li Shen, Zixuan Hu, Chun Yuan, Xiaochun Cao

Merging multiple expert models offers a promising approach for performing multi-task learning without accessing their original data. Existing methods attempt to alleviate task conflicts by sparsifying task vectors or promoting orthogonality among them. However, they overlook the fundamental target of model merging: the merged model performs as closely as possible to task-specific models on respective tasks. We find these methods inevitably discard task-specific information that, while causing conflicts, is crucial for performance. Based on our findings, we frame model merging as a constrained optimization problem ($\textit{i.e.}$, minimizing the gap between the merged model and individual models, subject to the constraint of retaining shared knowledge) and solve it via adaptive projective gradient descent. Specifically, we align the merged model with individual models by decomposing and reconstituting the loss function, alleviating conflicts through $\textit{data-free}$ optimization of task vectors. To retain shared knowledge, we optimize this objective by projecting gradients within a $\textit{shared subspace}$ spanning all tasks. Moreover, we view merging coefficients as adaptive learning rates and propose a task-aware, training-free strategy. Experiments show that our plug-and-play approach consistently outperforms previous methods, achieving state-of-the-art results across diverse architectures and tasks in both vision and NLP domains.

Theory · Domain Adaptation and Transfer Learning

Wenxu Wang, Rui Zhou, Jing Wang, Yun Zhou, Cheng Zhu, Ruichun Tang, Bo Han, Nevin Zhang

Open-Set Domain Adaptation (OSDA) aims to transfer knowledge from the labeled source domain to the unlabeled target domain that contains unknown categories, thus facing the challenges of domain shift and unknown category recognition. While recent works have demonstrated the potential of causality for domain alignment, little exploration has been conducted on causal-inspired theoretical frameworks for OSDA. To fill this gap, we introduce the concept of *Susceptibility* and propose a novel **C**ounterfactual-based susceptibility risk framework for **OSDA**, termed **COSDA**. Specifically, COSDA consists of three novel components: (i) a *Susceptibility Risk Estimator (SRE)* for capturing causal information, along with comprehensive derivations of the computable theoretical upper bound, forming a risk minimization framework under the OSDA paradigm; (ii) a *Contrastive Feature Alignment (CFA)* module, which is theoretically proven based on mutual information to satisfy the *Exogeneity* assumption and facilitate cross-domain feature alignment; (iii) a *Virtual Multi-unknown-categories Prototype (VMP)* pseudo-labeling strategy, providing label information by measuring how similar samples are to known and multiple virtual unknown category prototypes, thereby assisting in open-set recognition and intra-class discriminative feature learning. Extensive experiments demonstrate that our approach achieves state-of-the-art performance.

Theory · Domain Adaptation and Transfer Learning

Yifan HAO, xingyuan pan, Hanning Zhang, Chenlu Ye, Rui Pan, Tong Zhang

Supervised fine-tuning (SFT) on domain-specific data is the dominant approach for adapting foundation models to specialized tasks. However, it has been observed that SFT models tend to forget knowledge acquired during pretraining. In vision models, ensembling a pretrained model with its fine-tuned counterpart has been shown to mitigate this issue. In this work, we demonstrate that the same holds for language models, and, more strikingly, we observe an overadaptation phenomenon: the ensemble model not only retains general knowledge from the foundation model but also outperforms the fine-tuned model even on the fine-tuning domain itself.Despite the empirical success of ensembling, a theoretical understanding of its benefits remains underexplored. We develop a formal theoretical analysis of the overadaptation phenomenon. Ensembling mitigates this by balancing two primary sources of error: bias, caused by insufficient fine-tuning, and variance, introduced by overfitting to fine-tuning data. While regularization techniques aim to address this trade-off, we show that ensembling provides a more effective solution. We analyze this phenomenon in over-parameterized linear settings and demonstrate that interpolating between pretrained and fine-tuned weights significantly improves performance. These findings offer theoretical justification for the observed advantages of model ensembling, supported by empirical experiments consistent with our analysis.

Deep Learning · Sequential Models, Time series

Yihang Wang, Yuying Qiu, Peng Chen, Kai Zhao, Yang Shu, Zhongwen Rao, Lujia Pan, Bin Yang, Chenjuan Guo

With the growing availability of multi-domain time series data, there is an increasing demand for general forecasting models pre-trained on multi-source datasets to support diverse downstream prediction scenarios. Existing time series foundation models primarily focus on scaling up pre-training datasets and model sizes to enhance generalization performance. In this paper, we take a different approach by addressing two critical aspects of general forecasting models: (1) how to derive unified representations from heterogeneous multi-domain time series data, and (2) how to effectively capture domain-specific features to enable adaptive transfer across various downstream scenarios. To address the first aspect, we propose Decomposed Frequency Learning as the pre-training task, which leverages frequency-based masking and reconstruction to decompose coupled semantic information in time series, resulting in unified representations across domains. For the second aspect, we introduce the Time Series Register, which captures domain-specific representations during pre-training and enhances adaptive transferability to downstream tasks. Our model achieves the state-of-the-art forecasting performance on seven real-world benchmarks, demonstrating remarkable few-shot and zero-shot capabilities.

General Machine Learning · Transfer, Multitask and Meta-learning

Ruiyi Fang, Bingheng Li, Jingyu Zhao, Ruizhi Pu, QIUHAO Zeng, Gezheng Xu, Charles X. Ling, Boyu Wang

Graph Domain Adaptation (GDA) transfers knowledge from labeled source graphs to unlabeled target graphs, addressing the challenge of label scarcity. In this paper, we highlight the significance of graph homophily, a pivotal factor for graph domain alignment, which, however, has long been overlooked in existing approaches. Specifically, our analysis first reveals that homophily discrepancies exist in benchmarks. Moreover, we also show that homophily discrepancies degrade GDA performance from both empirical and theoretical aspects, which further underscores the importance of homophily alignment in GDA. Inspired by this finding, we propose a novel homophily alignment algorithm that employs mixed filters to smooth graph signals, thereby effectively capturing and mitigating homophily discrepancies between graphs. Experimental results on a variety of benchmarks verify the effectiveness of our method.

Applications · Health / Medicine

Daniel Shao, Richard Chen, Andrew Song, Joel Runevic, Ming Y. Lu, Tong Ding, Faisal Mahmood

Multiple Instance Learning (MIL) is a cornerstone approach in computational pathology for distilling embeddings from gigapixel tissue images into patient-level representations to predict clinical outcomes. However, MIL is frequently challenged by the constraints of working with small, weakly-supervised clinical datasets. Unlike fields such as natural language processing and computer vision, which effectively use transfer learning to improve model quality in data-scarce environments, the transferability of MIL models remains largely unexplored. We conduct the first comprehensive investigation into transfer learning capabilities of pretrained MIL models, evaluating 11 MIL models across 19 pretraining tasks spanning tissue subtyping, cancer grading, and molecular subtype prediction. We observe a substantial performance boost with finetuning pretrained models over training from randomly initialized weights, even with domain differences between pretraining and target tasks. Pretraining on pan-cancer datasets enables consistent generalization across organs and task types compared to single-disease pretraining. Remarkably, this pan-cancer pretraining leads to better transfer than that of a state-of-the-art slide-level foundation model, while using only 6.5\% of the training data. These findings indicate that MIL architectures exhibit robust adaptability, offering insights into the benefits of leveraging pretrained models to enhance performance in computational pathology.

Applications · Computer Vision

Wangkai Li, Rui Sun, Bohao Liao, Zhaoyang Li, Tianzhu Zhang

Unsupervised domain adaptation (UDA) for semantic segmentation aims to transfer knowledge from a labeled source domain to an unlabeled target domain.Despite the effectiveness of self-training techniques in UDA, they struggle to learn each class in a balanced manner due to inherent class imbalance and distribution shift in both data and label space between domains.To address this issue, we propose Balanced Learning for Domain Adaptation (BLDA), a novel approach to directly assess and alleviate class bias without requiring prior knowledge about the distribution shift.First, we identify over-predicted and under-predicted classes by analyzing the distribution of predicted logits.Subsequently, we introduce a post-hoc approach to align the logits distributions across different classes using shared anchor distributions.To further consider the network's need to generate unbiased pseudo-labels during self-training, we estimate logits distributions online and incorporate logits correction terms into the loss function.Moreover, we leverage the resulting cumulative density as domain-shared structural knowledge to connect the source and target domains.Extensive experiments on two standard UDA semantic segmentation benchmarks demonstrate that BLDA consistently improves performance, especially for under-predicted classes, when integrated into various existing methods.

Theory · Domain Adaptation and Transfer Learning

Ignavier Ng, Yan Li, Zijian Li, Yujia Zheng, Guangyi Chen, Kun Zhang

A central problem in unsupervised domain adaptation is determining what to transfer from labeled source domains to an unlabeled target domain. To handle high-dimensional observations (e.g., images), a line of approaches use deep learning to learn latent representations of the observations, which facilitate knowledge transfer in the latent space. However, existing approaches often rely on restrictive assumptions to establish identifiability of the joint distribution in the target domain, such as independent latent variables or invariant label distributions, limiting their real-world applicability. In this work, we propose a general domain adaptation framework that learns compact latent representations to capture distribution shifts relative to the prediction task and address the fundamental question of what representations should be learned and transferred. Notably, we first demonstrate that learning representations based on all the predictive information, i.e., the label's Markov blanket in terms of the learned representations, is often underspecified in general settings. Instead, we show that, interestingly, general domain adaptation can be achieved by partitioning the representations of Markov blanket into those of the label's parents, children, and spouses. Moreover, its identifiability guarantee can be established. Building on these theoretical insights, we develop a practical, nonparametric approach for domain adaptation in a general setting, which can handle different types of distribution shifts.

General Machine Learning · Transfer, Multitask and Meta-learning

Jintao Tong, Ran Ma, Yixiong Zou, Guangyao Chen, Yuhua Li, Ruixuan Li

Cross-domain few-shot segmentation (CD-FSS) is proposed to first pre-train the model on a source-domain dataset with sufficient samples, and then transfer the model to target-domain datasets where only a few training samples are available for efficient finetuning. There are majorly two challenges in this task: (1) the domain gap and (2) finetuning with scarce data. To solve these challenges, we revisit the adapter-based methods, and discover an intriguing insight not explored in previous works: the adapter not only helps the fine-tuning of downstream tasks but also naturally serves as a domain information decoupler. Then, we delve into this finding for an interpretation, and we find the model's inherent structure could lead to a natural decoupling of domain information. Building upon this insight, we propose the Domain Feature Navigator (DFN), which is a structure-based decoupler instead of loss-based ones like current works, to capture domain-specific information, thereby directing the model's attention towards domain-agnostic knowledge. Moreover, to prevent the potential excessive overfitting of DFN during the source-domain training, we further design the SAM-SVN method to constrain DFN from learning sample-specific knowledge. On target domains, we freeze the model and fine-tune the DFN to learn knowledge specific to target domains. Extensive experiments demonstrate that our method surpasses the state-of-the-art method in CD-FSS significantly by 2.69% and 4.68% average MIoU in 1-shot and 5-shot scenarios, respectively.

General Machine Learning · Transfer, Multitask and Meta-learning

Junyu Luo, Yuhao Tang, Yiwei Fu, Xiao Luo, Zhizhuo KOU, Zhiping Xiao, Wei Ju, Wentao Zhang, Ming Zhang

Unsupervised Graph Domain Adaptation (UGDA) leverages labeled source domain graphs to achieve effective performance in unlabeled target domains despite distribution shifts. However, existing methods often yield suboptimal results due to the entanglement of causal-spurious features and the failure of global alignment strategies. We propose SLOGAN (Sparse Causal Discovery with Generative Intervention), a novel approach that achieves stable graph representation transfer through sparse causal modeling and dynamic intervention mechanisms. Specifically, SLOGAN first constructs a sparse causal graph structure, leveraging mutual information bottleneck constraints to disentangle sparse, stable causal features while compressing domain-dependent spurious correlations through variational inference. To address residual spurious correlations, we innovatively design a generative intervention mechanism that breaks local spurious couplings through cross-domain feature recombination while maintaining causal feature semantic consistency via covariance constraints. Furthermore, to mitigate error accumulation in target domain pseudo-labels, we introduce a category-adaptive dynamic calibration strategy, ensuring stable discriminative learning. Extensive experiments on multiple real-world datasets demonstrate that SLOGAN significantly outperforms existing baselines.

Theory · Domain Adaptation and Transfer Learning

Noah Golowich, Samy Jelassi, David Brandfonbrener, Sham Kakade, Eran Malach

Training large language models to predict beyond their training context lengths has drawn much attention in recent years, yet the principles driving such behavior of length generalization remain underexplored. We propose a new theoretical framework to study length generalization for the next-token prediction task, as performed by decoder-only transformers. Conceptually, we show that length generalization occurs as long as each predicted token depends on a small (fixed) number of previous tokens. We formalize such tasks via a notion we call k-sparse planted correlation distributions, and show that an idealized model of transformers which generalize attention heads successfully length-generalize on such tasks. As a bonus, our theoretical model allows us to provide justifications for techniques to modify positional embeddings which have been introduced to improve length generalization, such as position coupling.We support our theoretical results with experiments on synthetic tasks and natural language, which confirm that a key factor driving length generalization is indeed a ``sparse'' dependency structure of each token on the previous ones. Further, inspired by our theory, we introduce Predictive Position Coupling, a generalization of position coupling which trains the transformer to predict the position IDs used in a positional coupling approach. Predictive Position Coupling thereby allows us to broaden the array of tasks to which Position Coupling can successfully be applied to achieve length generalization.

Deep Learning · Algorithms

Yucheng Xie, Fu Feng, Ruixiao Shi, Jing Wang, Yong Rui, Xin Geng

Pre-trained models have become the preferred backbone due to the increasing complexity of model parameters. However, traditional pre-trained models often face deployment challenges due to their fixed sizes, and are prone to negative transfer when discrepancies arise between training tasks and target tasks.To address this, we propose **KIND**, a novel pre-training method designed to construct decomposable models.KIND integrates knowledge by incorporating Singular Value Decomposition (SVD) as a structural constraint, with each basic component represented as a combination of a column vector, singular value, and row vector from $U$, $\Sigma$, and $V^\top$ matrices.These components are categorized into **learngenes** for encapsulating class-agnostic knowledge and \textbf{tailors} for capturing class-specific knowledge, with knowledge diversion facilitated by a class gate mechanism during training.Extensive experiments demonstrate that models pre-trained with KIND can be decomposed into learngenes and tailors, which can be adaptively recombined for diverse resource-constrained deployments. Moreover, for tasks with large domain shifts, transferring only learngenes with task-agnostic knowledge, when combined with randomly initialized tailors, effectively mitigates domain shifts.Code will be made available at https://github.com/Te4P0t/KIND.