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Applications · Robotics

Xukun Li, Yu Sun, Lei Zhang, Bo-Sheng Huang, Yibo Peng, Yuan Meng, Haojun Jiang, Shaoxuan Xie, Guocai Yao, Alois Knoll 等

Bimanual dexterous manipulation relies on integrating multimodal inputs to perform complex real-world tasks. To address the challenges of effectively combining these modalities, we propose DECO, a decoupled multimodal diffusion transformer that disentangles vision, proprioception, and tactile signals through specialized conditioning pathways, enabling structured and controllable integration of multimodal inputs, with a lightweight adapter for parameter-efficient injection of additional signals. Alongside DECO, we release DECO-50 dataset for bimanual dexterous manipulation with tactile sensing, consisting of 50 hours of data and over 5M frames, collected via teleoperation on real dual-arm robots. We train DECO on DECO-50 and conduct extensive real-world evaluation with over 2,000 robot rollouts. Experimental results show that DECO achieves the best performance across all tasks, with a 72.25\% average success rate and a 21\% improvement over the baseline. Moreover, the tactile adapter brings an additional 10.25\% average success rate across all tasks and a 20\% gain on complex contact-rich tasks while tuning less than 10\% of the model parameters.

Applications · Robotics

Letian Fu, Justin Yu, Karim El-Refai, Ethan Kou, Haoru Xue, Huang Huang, Wenli Xiao, Li Fei-Fei, Guanya Shi, Jiajun Wu 等

“Code-as-Policy” considers how executable code can complement data-intensive Vision-LanguageAction (VLA) methods, yet their effectiveness as autonomous controllers for embodied manipulation remains underexplored. We present CaPX, an open-access framework for systematically studying Code-as-Policy agents in robot manipulation. At its core is CaP-Gym, an interactive environment in which agents control robots by synthesizing and executing programs that compose perception and control primitives. Building on this foundation, CaP-Bench evaluates frontier language and vision-language models across varying levels of abstraction, interaction, and perceptual grounding. Across 7 simulation tasks and 12 models, CaP-Bench reveals a consistent trend: performance improves with human-crafted abstractions but degrades as these priors are removed, exposing a dependence on designer scaffolding. At the same time, we observe that this gap can be mitigated through scaling agentic test-time computation–through multi-turn interaction, structured execution feedback, visual differencing, automatic skill synthesis, and ensembled reasoning–substantially improves robustness even when agents operate over low-level primitives. These findings allow us to derive CaP-Agent0, a training-free framework that recovers human-level reliability on several manipulation tasks in simulation and on real embodiments. We further introduce CaP-RL, showing reinforcement learning with verifiable rewards improves success rates and transfers from sim2real with minimal gap. Together, CaP-X provides a principled, open-access platform for advancing embodied coding agents. Project page: https://cap-x-anonymous.github.io

Deep Learning · Large Language Models

Yujie Wang, Siwei Chen, Longzan Luo, Xinyi Liu, Xupeng Miao, Fangcheng Fu, Bin Cui

Reinforcement Learning (RL) has become pivotal for improving model capabilities yet suffers from rollout efficiency bottlenecks due to the long-tail response length distribution. While existing works mitigate the impact of long tails via prompt-level tail scheduling, we focus on the root source of inefficiency: the distribution itself. Specifically, we characterize the long-tail distribution at a finer granularity, identifying intra-prompt long tails, and revealing that they frequently consist of ineffective verbosity. To address this, we propose a novel paradigm of active distribution shaping to shape the rollout distribution towards conciseness and certainty, thereby fundamentally resolving tail-induced overheads. We achieve this through a distribution-aware trajectory sampling mechanism, which selects trajectories from a redundant exploration space for each prompt, and an adaptive redundancy allocation scheme to maximize both shaping effectiveness and system efficiency. Experiments demonstrate significant acceleration over state-of-the-art systems by up to 1.77$\times$ without compromising model performance.

Deep Learning · Large Language Models

Xinwu Ye, Yicheng Mao, Jia Zhang, Yimeng (Yoyo) Liu, Hao Li, Fang Wu, Zhiwei Li, Yuxuan Liao, Zehong Wang, Zhiyuan Liu 等

Current chemical large language models (LLMs) predominantly rely on explicit Chain-of-Thought (CoT) to solve complex reasoning problems. However, forcing nonverbal tacit chemical logic into discrete natural language imposes a fundamental ``modality mismatch,'' creating an artificial bottleneck for reasoning. To investigate this, we introduce LatentChem, a reasoning interface that decouples chemical logic from linguistic generation, enabling the model to process information via continuous thought vectors and dynamic perception. Our investigation reveals a pivotal emergent behavior: spontaneous internalization. When optimized for task success, the model voluntarily abandons verbose textual derivations in favor of implicit latent computation, suggesting that it autonomously identifies the continuous manifold as a more native substrate for chemical logic. This paradigm shift also proves to be a superior computational strategy: LatentChem achieves a 59.88\% non-tie win rate against the strong CoT baseline on the rigorous ChemCoTBench, while delivering a broad 10.84$\times$ average speedup across all evaluated benchmarks. This empirically validates that chemical logic is inherently better modeled by continuous latent dynamics than by linear linguistic approximations.

Probabilistic Methods · Gaussian Processes

Jihao Andreas Lin, Sebastian Ament, Louis Tiao, David Eriksson, Maximilian Balandat, Eytan Bakshy

Gaussian processes (GPs) are powerful and widely used probabilistic regression models, but their effectiveness in practice is often limited by the choice of kernel function. This kernel function is typically handcrafted from a small set of standard functions, a process that requires expert knowledge, results in limited adaptivity to data, and imposes strong assumptions on the hypothesis space. We study Empirical GPs, a principled framework for constructing flexible, data-driven GP priors that overcome these limitations. Rather than relying on standard parametric kernels, we estimate the mean and covariance functions empirically from a corpus of historical observations, enabling the prior to reflect rich, non-trivial covariance structures present in the data. Theoretically, we show that the resulting model converges to the GP that is closest (in KL-divergence sense) to the real data generating process. Practically, we formulate the problem of learning the GP prior from independent datasets as likelihood estimation and derive an Expectation-Maximization algorithm with closed-form updates, allowing the model handle heterogeneous observation locations across datasets. We demonstrate that Empirical GPs achieve competitive performance on learning curve extrapolation and time series forecasting benchmarks.

General Machine Learning · Transfer, Multitask and Meta-learning

Hongwei Wen, Can Zhang, Haoyu He, Hanyuan Hang, Minglong Lei

We propose *Progressive Structure Adjustment for Homophily Shift* (*PSAHS*), a lightweight method for *Graph Domain Adaptation* (*GDA*) that explicitly addresses cross-domain mismatch in node-level homophily. PSAHS enhances node homophily in the source graph to a prescribed level by reweighting edges and introducing additional intra-class connections for low-homophily nodes, and conservatively refines the target graph using agreement-consistent predictions from a structure-aware *Graph Neural Network* (*GNN*) and an attribute-only *Multi-Layer Perceptron* (*MLP*) to ensure reliability under label scarcity. After each structural refinement, domain-adversarial training is employed to align node representations across domains. PSAHS employs a progressive training scheme that alternates between structure adjustment and representation alignment, where increasingly informative representations enable safer homophily correction, and the refined structure in turn improves representation learning. Extensive experiments on multiple GDA benchmarks demonstrate that PSAHS consistently outperforms strong baselines, with particularly large gains under severe homophily mismatch, highlighting the importance of explicit homophily alignment for effective cross-graph transfer.

Applications · Chemistry, Physics, and Earth Sciences

Yanming Xia, Angelica Aviles-Rivero

Neural operators perform well on structured domains, yet their behaviour on irregular geometries remains poorly understood. We show that this limitation is not merely an encoding issue, but a depth-wise failure mode inherent to deep operator architectures. We formalise the *Geometric Forgetting Hypothesis*: due to the Markovian structure of operator layers and their reliance on global mixing mechanisms, neural operators progressively lose access to domain geometry as depth increases. Using layer-wise geometric probing, we demonstrate that both spectral and attention-based operators systematically lose geometric fidelity. We show that this geometric forgetting degrades accuracy, stability, and generalisation. To counteract it, we introduce a lightweight *geometry memory injection* mechanism that restores geometric constraints at intermediate depths with minimal architectural overhead. This simple intervention consistently mitigates forgetting and exposes a *geometric shortcut* instability in transformer-based operators, revealing that geometric retention is a structural requirement rather than a design choice.

Jun-Peng Jiang, An-Yang Ji, Shiyin Lu, Guodong Zheng, Weihong Zhang, Qing-Guo Chen, Weihua Luo, Kaifu Zhang, Long Chen, De-Chuan Zhan 等

Document parsing, the task of extracting diverse content from PDFs while preserving their structural integrity, has been significantly advanced by Multimodal Large Language Models (MLLMs). These models have achieved remarkable success, largely driven by extensive post-training on massive datasets. This paper therefore undertakes a deep analysis of the two dominant adaptation strategies, Supervised Fine-Tuning (SFT) and Reinforcement Learning (RL), prompted by a puzzling observation on the PDF-to-Markdown task: SFT makes a negligible impact, especially on parsing complex tables and formulas, while RL achieves substantial overall gains. To unravel the reasons, our systematic investigation reveals a clear and complementary division of labor: SFT primarily operates as a structure learner, biased towards mastering the low-entropy syntax of document layouts. While it learns the format of a table, it struggles to ensure the fidelity of its high-entropy cell content. Conversely, RL excels as a content refiner by optimizing a holistic reward that reflects final accuracy. We further ground this phenomenon in the distinct theoretical nature of their respective objective functions. Based on these findings, we introduce a unified strategy that explicitly harnesses their individual strengths while mitigating their weaknesses. This work shows that a deep understanding of post-training methods is key to unlocking performance beyond what data scaling alone can achieve.

General Machine Learning · Online Learning, Active Learning and Bandits

Chloé Rouyer, Ronald Ortner, Peter Auer

We study a variant of the stochastic multi-armed bandit problem in which the learner aims to identify and play an arbitrary arm whose mean reward exceeds a known satisficing threshold $S$, rather than optimizing against the best arm. Prior work has shown that when such a satisficing arm exists, time-independent bounds on the satisficing regret are achievable, but these guarantees deteriorate when an arm lies close to the threshold. We focus on instances in which the excess gap $\Delta_*$ (gap between the best arm and the threshold) is small relative to the suboptimality gaps $\Delta_i$, a regime that exposes this limitation. To capture this challenge, we introduce a refined notion of regret and propose a new algorithm, uncertain-UCB, which achieves *satisficing* pseudo-regret of $ O \left(\sum_{i: \Delta_i > \Delta_*} \frac{\log(K/\Delta_*)}{\Delta_i}\right), $ while recovering standard pseudo-regret bounds when no arm exceeds the threshold. Further, we establish a near-matching lower bound in the small excess-gap regime, showing that any algorithm incurs at least $ \Omega \left(\sum_{i: \Delta_i > \Delta_*} \frac{\log \left(\left(\sum_{i:\Delta_i > \Delta_*} \Delta_*/\Delta_i\right)^{-1}\right)}{\Delta_i}\right) $ satisficing pseudo-regret.

General Machine Learning · Evaluation

Jiaze Li, Aocheng Shen, Bing Liu, Boyu Zhang, Xiaoxuan Fan, Qiankun Zhang, Xianjun Deng

Competitive programming is increasingly being used to evaluate the algorithmic reasoning capabilities of large language models (LLMs). However, existing benchmarks primarily focus on full-information tasks where all problem inputs are provided upfront. This overlooks a critical dimension of algorithmic reasoning: the ability of generated programs to operate when key information is not revealed upfront. *Interactive* problems, a distinctive component of competitive programming, embody this challenge. These problems require programs to engage in multi-round interaction with an interactor (a judge program) under strict protocol constraints and limited query budgets. Crucially, new information is revealed *only* in response to queries. To address this gap, we introduce *InteractBench*, a benchmark comprising 322 high-quality interactive problems curated from Codeforces, AtCoder, IOI, and ICPC. Each problem is packaged with executable local interactors, enabling fully offline evaluation without external judge submission. Unlike existing benchmarks, InteractBench assesses whether model-generated code can acquire information and track state dynamically. Our evaluation reveals a significant interaction gap: even the most advanced reasoning models achieve limited success on interactive problems. Beyond success rates, we propose a fine-grained failure taxonomy to systematically diagnose the root causes of these deficiencies. Although algorithmic logic errors remain the dominant failure mode, protocol violations and query-budget overruns are frequently observed. The benchmark is provided in the supplementary material.

Applications · Neuroscience, Cognitive Science

Yizhuo Lu, Changde Du, Qingyu Shi, Hang Chen, Jie Peng, Liuyun Jiang, Shuangchen Zhao, Huiguang He

Modeling the interplay between external stimuli and internal neural representations is a pivotal research area for Brain-Computer Interfaces (BCIs). A major limitation of prior work is the prevailing paradigm of specialized, single-task models, which curtails versatility and neglects inter-task synergies. To address this, we propose Mind-Omni, the first versatile framework that unifies seven distinct encoding and decoding tasks through a discrete diffusion paradigm. At its core is a novel Brain Tokenizer that transforms heterogeneous, continuous brain signals into standardized, discrete tokens. This enables direct, token-level interactions for mutual understanding and generation between any two or more modalities within a shared semantic space. To unlock advanced reasoning capabilities, we further curate a specialized Brain Question Answering (BQA) instruction-tuning dataset. Our model not only establishes a new state-of-the-art among multi-task unified frameworks but also provides strong evidence for multi-task synergy. By demonstrating performance competitive with, and at times superior to, larger specialized models, our work offers a powerful new paradigm for neural modeling and paves the way for foundation models of neural activity.

Deep Learning · Large Language Models

An-Yang Ji, Jun-Peng Jiang, De-Chuan Zhan, Han-Jia Ye

Large Language Models (LLMs) have advanced Table Question Answering, where most queries can be answered by extracting information or simple aggregation. However, a common class of real-world queries is implicitly predictive, requiring the inference of unobserved answers from historical patterns rather than mere retrieval. These queries introduce two challenges: recognizing latent intent and reliable predictive reasoning over massive tables. To assess LLMs in such Tabular questiOn answering with implicit Prediction tasks, we introduce TopBench, a benchmark consisting of 779 samples across four sub-tasks, ranging from single-point prediction to decision making, treatment effect analysis, and complex filtering, requiring models to generate outputs spanning reasoning text and structured tables. We evaluate diverse models under both text-based and agentic workflows. Experiments reveal that current models often struggle with intent recognition, defaulting to just lookups. Deeper analysis identifies that accurate intent disambiguation serves as the prerequisite for leading these predictive behaviors. Furthermore, elevating the upper bound of prediction precision requires the integration of more sophisticated modeling or reasoning capabilities.

Applications · Health / Medicine

Jiaxin Qi, Hang Li, Yan Cui, Yuhua Zheng, Jianqiang Huang

Gene Regulatory Network (GRN) inference is essential for understanding complex cellular mechanisms, rendered tractable through single-cell transcriptomic data. With the emergence of single-cell Foundation Models (scFMs), enhanced transcriptomic encoding is widely expected to revolutionize GRN inference. However, we observe that their performance remains far from satisfactory. The primary reason is that the standard reconstruction-based pre-training objectives often fail to explicitly capture latent regulatory signals. To bridge this gap, we first introduce a GRN generalization benchmark designed to evaluate regulatory predictions on unseen genes and datasets, which relies on the zero-shot capabilities of scFMs and is inherently challenging for traditional methods. Furthermore, to unlock the regulatory knowledge within the foundation models, we propose two novel methods, Virtual Value Perturbation and Gradient Trajectory, to distill implicit regulatory information from scFMs into highly generalizable inter-gene features. Extensive experiments demonstrate that our approach significantly outperforms existing methods, establishing a new paradigm for leveraging the potential of scFMs in universal GRN inference.

Reinforcement Learning · Deep RL

Deunsol Yoon, Sunghoon Hong, Whiyoung Jung, Junseok Park, Geon-Hyeong Kim, Woohyung Lim, Soonyoung Lee, Seung Hwan Kim, Kanghoon Lee

Large Language Models (LLMs) have emerged as powerful tools for semantic reasoning, enabling the formalization of tasks that traditionally relied on manual human intuition. This capability extends to environment design in Reinforcement Learning (RL). While prior research predominantly focuses on reward design, the design of observation and action spaces remains relatively underexplored. We propose LOAM, a framework leveraging LLMs to construct refined agent spaces from raw environments. To mitigate the computational burden of identifying the best candidate model from stochastic LLM outputs, LOAM incorporates a continuous racing mechanism that dynamically allocates resources to prioritize the most promising configurations without additional training overhead. Empirical evaluations on HumanoidBench and Isaac Lab demonstrate that LOAM consistently outperforms handcrafted baselines in both learning speed and asymptotic performance.

Social Aspects · Accountability, Transparency, and Interpretability

Tang Li, Yanlin Chen, Mengmeng Ma, Xi Peng

Despite the high accuracy, Vision Transformer (ViT) predictions can be driven by spurious cues. Interpreting their inner workings is therefore essential for safe deployment. Sparse autoencoders (SAEs) shed light on decomposing language-model representations into concepts. However, adapting SAE-based interpretation to ViTs remains challenging due to limited control over concept coverage and subjective, non-scalable feature interpretation. To fill the gaps, motivated by stimulus-efficient probing in systems neuroscience, we propose ViSAE, a compact diagnostic toolbox for interpreting the internal mechanisms of ViTs. Specifically, we introduce a probing suite with 64K images and a 16K visually grounded concept vocabulary, improving concept coverage efficiency by 20× over ImageNet and interpretation accuracy by 28.7% over existing concept sets. We further develop an algorithm that automatically interprets SAE features at scale and causally traces cross-layer interactions to recover ViT inner workings using concept circuits. Our method supports auditing spurious correlations and failure modes, and boosts worst-group accuracy on WaterBirds by 48.2% through concept steering.

Deep Learning · Large Language Models

Zhi-Quan Feng, Ying-Jia Lin, Hung-Yu Kao

LoRA adapts large language models (LLMs) by restricting updates to low-rank subspaces of pre-trained weights. While this substantially reduces training cost, the effectiveness of adaptation critically depends on which subspace is chosen at initialization: a poor initialization that allocates capacity to task-irrelevant directions can severely hinder downstream performance. Existing initialization strategies primarily rely on the intrinsic properties of pre-trained weights, implicitly assuming that weight geometry alone reflects task relevance. However, such criteria overlook how the model interacts with the downstream data distribution. In this work, we formulate LoRA initialization as the problem of identifying directions in parameter space that are the most impactful under the target data distribution. We argue that data-aware sensitivity, rather than weight-only magnitude, should govern the choice of adaptation subspaces. Building on this perspective, we propose a Fisher-guided framework that leverages curvature information induced by downstream data to characterize how parameter perturbations influence model predictions. This perspective yields a principled, task-dependent criterion for selecting LoRA directions that better align adaptation with the target objective. Empirical results across diverse tasks and modalities demonstrate that data-aware initialization consistently and significantly improves downstream performance over existing approaches.

Deep Learning · Sequential Models, Time series

Tomoyoshi Kimura, Denizhan Kara, Jinyang Li, Hongjue Zhao, Yigong Hu, Yizhuo Chen, Xiaomin OUYANG, Shengzhong Liu, Tarek Abdelzaher

Internet of Things (IoT) systems continuously collect heterogeneous sensing signals from ubiquitous sensors to support intelligent applications such as human activity analysis, emotion monitoring, and environmental perception. These signals are inherently non-stationary and multi-scale, posing unique challenges for standard tokenization techniques. This paper proposes Dywave, a dynamic tokenization framework for IoT sensing signals that constructs compact input representations aligned with intrinsic temporal structures and underlying physical events. Dywave leverages wavelet-based hierarchical decomposition, identifies meaningful temporal boundaries corresponding to underlying semantic events, and adaptively compresses redundant intervals while preserving temporal coherence. Extensive evaluations on five real-world IoT sensing datasets across activity recognition, stress assessment, and nearby object detection demonstrate that Dywave outperforms state-of-the-art methods by up to 12\% in accuracy, while improving computational efficiency by reducing input token lengths by up to 75\% across mainstream sequence models. Moreover, Dywave exhibits improved robustness to domain shifts and varying sequence lengths.

Rui Xu, Yi Chen, Jiujiu Chen, Sihong Xie

In retrieval-augmented generation, language models can generate incorrect responses if they fail to utilize query-relevant content from the retrieved evidence. This shifts the focus of uncertainty quantification (UQ) toward assessing contextual grounding, i.e., whether predictions are supported by query-relevant tokens. Recent UQ methods unpack language models to characterize how inputs are processed. Nevertheless, these methods focus on a few layers and overlook the whole progressive propagation within the model, thereby failing to fully capture the grounding dynamics essential for reliable uncertainty estimation. We use information flow to build a layer-wise trace that reveals each context token’s contribution to the output, providing an interpretable basis for assessing reliability. From this analysis, we introduce two measures to calibrate prediction confidence. The first, \textit{simulatability}, posits that a prediction is more likely to be correct when context token contributions align closely with their true relevance. The second, \textit{concentration}, asserts that a response is more likely to be correct when it is derived from a narrow, focused subset of tokens. Experiments show that our method achieves an average AUROC of 0.70, exceeding the runner-up performance of 0.65, while maintaining moderate computational cost.

Deep Learning · Large Language Models

Rui Xu, Yi Chen, Jiujiu Chen, Sihong Xie

In retrieval-augmented generation, language models can generate incorrect responses if they fail to utilize query-relevant content from the retrieved evidence. This shifts the focus of uncertainty quantification (UQ) toward assessing contextual grounding, i.e., whether predictions are supported by query-relevant tokens. Recent UQ methods unpack language models to characterize how inputs are processed. Nevertheless, these methods focus on a few layers and overlook the whole progressive propagation within the model, thereby failing to fully capture the grounding dynamics essential for reliable uncertainty estimation. We use information flow to build a layer-wise trace that reveals each context token’s contribution to the output, providing an interpretable basis for assessing reliability. From this analysis, we introduce two measures to calibrate prediction confidence. The first, \textit{simulatability}, posits that a prediction is more likely to be correct when context token contributions align closely with their true relevance. The second, \textit{concentration}, asserts that a response is more likely to be correct when it is derived from a narrow, focused subset of tokens. Experiments show that our method achieves an average AUROC of 0.70, exceeding the runner-up performance of 0.65, while maintaining moderate computational cost.

Optimization · Large Scale, Parallel and Distributed

Yihan Zhang, Xinwen Zhang, My T. Thai, Jie Wu, Hongchang Gao

Decentralized stochastic bi-level optimization has been actively studied in recent years. However, existing studies assume that the lower-level loss function is strongly convex, which limits their applicability to many machine learning models. To address this limitation, in this paper, we propose a novel decentralized stochastic first-order optimization algorithm, which does not require second-order Hessian or Jacobian matrices, for the setting where the lower-level loss function is nonconvex but satisfies the Polyak–Łojasiewicz (PL) condition. Additionally, unlike existing single-agent methods that introduce a regularization term to the lower-level loss function to artificially enforce strong convexity, our algorithm does not require such modification. Moreover, our algorithm employs a constant single-timescale learning rate for updating variables, which is different from the time-dependent and two-timescale learning rate schedules used in prior work. To establish the convergence rate, we develop a new convergence analysis framework for the pure PL condition, rather than relying on the artificial strong convexity introduced through regularization in existing single-agent methods. To the best of our knowledge, this is the first algorithm for nonconvex decentralized bi-level optimization that offers theoretical convergence guarantees under mild conditions. Finally, our extensive experimental results on hyperparameter optimization and model pruning applications validate the efficacy of the proposed algorithm.