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Optimization

Xijun Li, Jiexiang Yang, Jinghao Wang, Bo Peng, Jianguo Yao, Haibing Guan

Combinatorial optimization (CO) problems, central to operation research and theoretical computer science, present significant computational challenges due to their $\mathcal{NP}$-hard nature. While large language models (LLMs) have emerged as promising tools for CO—either by directly generating solutions or synthesizing solver-specific codes—existing approaches often $\textit{neglect critical structural priors inherent to CO problems}$, leading to suboptimality and iterative inefficiency. Inspired by human experts’ success in leveraging CO structures for algorithm design, we propose $\texttt{STRCMP}$, a novel structure-aware LLM-based algorithm discovery framework that systematically integrates structure priors to enhance solution quality and solving efficiency. Our framework combines a graph neural network (GNN) for extracting structural embeddings from CO instances with an LLM conditioned on these embeddings to identify high-performed algorithms in the form of solver-specific codes. This composite architecture ensures syntactic correctness, preserves problem topology, and aligns with natural language objectives, while an evolutionary refinement process iteratively optimizes generated algorithm. Extensive evaluations across Mixed Integer Linear Programming and Boolean Satisfiability problems, using nine benchmark datasets, demonstrate that our proposed $\texttt{STRCMP}$ outperforms five strong neural and LLM-based methods by a large margin, in terms of both solution optimality and computational efficiency. The code is publicly available in the repository: https://github.com/Y-Palver/L2O-STRCMP.

Applications · Time Series

Haotian Gao, Zheng Dong, Jiawei Yong, Shintaro Fukushima, Kenjiro Taura, Renhe Jiang

Spatio-temporal forecasting is essential for real-world applications such as traffic management and urban computing. Although recent methods have shown improved accuracy, they often fail to account for dynamic deviations between current inputs and historical patterns. These deviations contain critical signals that can significantly affect model performance. To fill this gap, we propose $\textbf{ST-SSDL}$, a $\underline{S}$patio-$\underline{T}$emporal time series forecasting framework that incorporates a $\underline{S}$elf-$\underline{S}$upervised $\underline{D}$eviation $\underline{L}$earning scheme to capture and utilize such deviations. ST-SSDL anchors each input to its historical average and discretizes the latent space using learnable prototypes that represent typical spatio-temporal patterns. Two auxiliary objectives are proposed to refine this structure: a contrastive loss that enhances inter-prototype discriminability and a deviation loss that regularizes the distance consistency between input representations and corresponding prototypes to quantify deviation. Optimized jointly with the forecasting objective, these components guide the model to organize its hidden space and improve generalization across diverse input conditions. Experiments on six benchmark datasets show that ST-SSDL consistently outperforms state-of-the-art baselines across multiple metrics. Visualizations further demonstrate its ability to adaptively respond to varying levels of deviation in complex spatio-temporal scenarios. Our code and datasets are available at https://github.com/Jimmy-7664/ST-SSDL.

Applications

Haoyu Zhang, Meng Liu, Zaijing Li, Haokun Wen, Weili Guan, Yaowei Wang, Liqiang Nie

Visual-spatial understanding, the ability to infer object relationships and layouts from visual input, is fundamental to downstream tasks such as robotic navigation and embodied interaction. However, existing methods face spatial uncertainty and data scarcity, limiting the 3D spatial reasoning capability of pre-trained vision-language models (VLMs). To address these challenges, we present a unified framework for enhancing 3D spatial reasoning in pre-trained VLMs without modifying their architecture. This framework combines SpatialMind, a structured prompting strategy that decomposes complex scenes and questions into interpretable reasoning steps, with ScanForgeQA, a scalable question-answering dataset built from diverse 3D simulation scenes through an automated construction process designed for fine-tuning. Extensive experiments across multiple benchmarks demonstrate the individual and combined effectiveness of our prompting and fine-tuning strategies, and yield insights that may inspire future research on visual-spatial understanding.

Computer Vision · Classification and Understanding

Hossein Jafarinia, Danial Hamdi, Amirhossein Alamdar, Elahe Zahiri, Soroush Vafaie Tabar, Alireza Alipanah, Nahal Mirzaie, Saeed Razavi, Amir Najafi, Mohammad Hossein Rohban

Multiple Instance Learning (MIL) is a standard weakly supervised approach for Whole Slide Image (WSI) classification, where performance hinges on both feature representation and MIL pooling strategies. Recent research has predominantly focused on Transformer-based architectures adapted for WSIs. However, we argue that this trend faces a fundamental limitation: data scarcity. In typical settings, Transformer models yield only marginal gains without access to large-scale datasets—resources that are virtually inaccessible to all but a few well-funded research labs. Motivated by this, we revisit simple, non-attention MIL with unsupervised slide features and analyze temperature-$\beta$-controlled log-sum-exp (LSE) pooling. For slides partitioned into $N$ patches, we theoretically show that LSE has a smooth transition at a critical $\beta_{\mathrm{crit}}=\mathcal{O}(\log N)$ threshold, interpolating between mean-like aggregation (stable, better generalization but less sensitive) and max-like aggregation (more sensitive but looser generalization bounds). Grounded in this analysis, we introduce Maxsoft—a novel MIL pooling function that enables flexible control over this trade-off, allowing adaptation to specific tasks and datasets. To further tackle real-world deployment challenges such as specimen heterogeneity, we propose PerPatch augmentation—a simple yet effective technique that enhances model robustness. Empirically, Maxsoft achieves state-of-the-art performance in low-data regimes across four major benchmarks (CAMELYON16, CAMELYON17, TCGA-Lung, and SICAP-MIL), often matching or surpassing large-scale foundation models. When combined with PerPatch augmentation, this performance is further improved through increased robustness. Code is available at \href{https://github.com/jafarinia/maxsoft}{\texttt{https://github.com/jafarinia/maxsoft}}

Data-centric AI · Data augmentation

Maria Marrium, Arif Mahmood, Muhammad Haris Khan, M. Shakeel, Wenxiong Kang

Graph Neural Networks (GNNs) have achieved remarkable success in a wide range of applications. However, when trained on limited or low-diversity datasets, GNNs are prone to overfitting and memorization, which impacts their generalization. To address this, graph data augmentation (GDA) has become a crucial task to enhance the performance and generalization of GNNs. Traditional GDA methods employ simple transformations that result in limited performance gains. Although recent diffusion-based augmentation methods offer improved results, they are sparse, task-specific, and constrained by class labels. In this work, we propose a more general and effective diffusion-based GDA framework that is task-agnostic and label-free. For better training stability and reduced computational cost, we employ a graph variational auto-encoder (GVAE) to learn a compact latent graph representation. A diffusion model is used in the learned latent space to generate both consistent and diverse augmentations. For a fixed augmentation budget, our algorithm selects a subset of samples that would benefit the most from the augmentation. To further improve performance, we also perform test-time augmentation, leveraged by the label-free nature of our method. Thanks to the efficient utilization of GVAE and latent diffusion, our algorithm significantly enhances machine learning safety measures, including calibration, robustness to corruptions, and prediction consistency. Moreover, our method has shown improved robustness against four types of adversarial attacks and achieves better generalization performance. To demonstrate the effectiveness of the proposed method, we compare it with 30 existing methods on 12 benchmark datasets across node classification, link prediction, and graph classification in various learning settings, including semi-supervised, supervised, and long-tailed data distributions. The code will soon be made publicly available.

Computer Vision · Image and Video Generation

Parsa Rahimi, Damien Teney, Sébastien Marcel

The increasing reliance on large-scale datasets in machine learning poses significant privacy and ethical challenges, particularly in sensitive domains such as face recognition. Synthetic data generation offers a promising alternative; however, most existing methods depend heavily on external datasets or pre-trained models, increasing complexity and resource demands. In this paper, we introduce **AugGen**, a self-contained synthetic augmentation technique. AugGen strategically samples from a class-conditional generative model trained exclusively on the target FR dataset, eliminating the need for external resources. Evaluated across 8 FR benchmarks, including IJB-C and IJB-B, our method achieves **1–12% performance improvements**, outperforming models trained solely on real data and surpassing state-of-the-art synthetic data generation approaches, while using less real data. Notably, these gains often exceed those from architectural modifications, underscoring the value of synthetic augmentation in data-limited scenarios. Our findings demonstrate that carefully integrated synthetic data can both mitigate privacy constraints and substantially enhance discriminative performance in face recognition. Code and datasets will be made publicly available upon publication.

Computer Vision · Vision Models & Multimodal

Liang Yin, Xudong Xie, Zhang Li, Xiang Bai, Yuliang Liu

Scene text retrieval has made significant progress with the assistance of accurate text localization. However, existing approaches typically require costly bounding box annotations for training. Besides, they mostly adopt a customized retrieval strategy but struggle to unify various types of queries to meet diverse retrieval needs. To address these issues, we introduce Multi-query Scene Text retrieval with Attention Recycling (MSTAR), a box-free approach for scene text retrieval. It incorporates progressive vision embedding to dynamically capture the multi-grained representation of texts and harmonizes free-style text queries with style-aware instructions. Additionally, a multi-instance matching module is integrated to enhance vision-language alignment. Furthermore, we build the Multi-Query Text Retrieval (MQTR) dataset, the first benchmark designed to evaluate the multi-query scene text retrieval capability of models, comprising four query types and $16k$ images. Extensive experiments demonstrate the superiority of our method across seven public datasets and the MQTR dataset. Notably, MSTAR marginally surpasses the previous state-of-the-art model by 6.4\% in MAP on Total-Text while eliminating box annotation costs. Moreover, on the MQTR benchmark, MSTAR significantly outperforms the previous models by an average of 8.5\%. The code and datasets are available at \href{https://github.com/yingift/MSTAR}{https://github.com/yingift/MSTAR}.

Theory · Reinforcement Learning and Planning

Mingzhe Du, Anh Tuan Luu, Yue Liu, Yuhao Qing, Dong HUANG, Xinyi He, Qian Liu, Zejun MA, See-Kiong Ng

Large Language Models (LLMs) generate functionally correct solutions but often fall short in code efficiency, a critical bottleneck for real-world deployment. In this paper, we introduce a novel test-time iterative optimization framework to address this, employing a closed-loop system where LLMs iteratively refine code based on empirical performance feedback from an execution sandbox. We explore three training strategies: Supervised Fine-Tuning (SFT), Direct Preference Optimization (DPO), and Group Relative Policy Optimization~(GRPO). Experiments on our Venus dataset and the APPS benchmark show that SFT and DPO rapidly saturate in efficiency gains. In contrast, GRPO, using reinforcement learning (RL) with execution feedback, continuously optimizes code performance, significantly boosting both pass@1 (from 47% to 62%) and the likelihood of outperforming human submissions in efficiency (from 31% to 45%). Our work demonstrates effective test-time code efficiency improvement and critically reveals the power of RL in teaching LLMs to truly self-improve code efficiency. We released our code and data at https://github.com/Elfsong/Afterburner.

General Machine Learning · Everything Else

Biao Liu, Ning Xu, Jie Wang, Xin Geng

Single-positive multi-label learning (SPMLL) is a weakly supervised multi-label learning problem, where each training example is annotated with only one positive label. Existing SPMLL methods typically assign pseudo-labels to unannotated labels with the assumption that prior probabilities of all classes are identical. However, the class-prior of each category may differ significantly in real-world scenarios, which makes the predictive model not perform as well as expected due to the unrealistic assumption on real-world application. To alleviate this issue, a novel framework named Crisp, i.e., Class-pRiors Induced Single-Positive multi-label learning, is proposed. Specifically, a class-priors estimator is introduced, which can estimate the class-priors that are theoretically guaranteed to converge to the ground-truth class-priors. In addition, based on the estimated class-priors, an unbiased risk estimator for classification is derived, and the corresponding risk minimizer can be guaranteed to approximately converge to the optimal risk minimizer on fully supervised data. Experimental results on ten MLL benchmark datasets demonstrate the effectiveness and superiority of our method over existing SPMLL approaches.

Deep Learning · Graph Neural Networks

Jiaming Zhuo, Ziyi Ma, Yintong Lu, Yuwei Liu, Kun Fu, Di Jin, Chuan Wang, Wu Wenning, Zhen Wang, Xiaochun Cao 等

Graph Transformers (GTs), which effectively capture long-range dependencies and structural biases simultaneously, have recently emerged as promising alternatives to traditional Graph Neural Networks (GNNs). Advanced approaches for GTs to leverage topology information involve integrating GNN modules or modulating node attributes using positional encodings. Unfortunately, the underlying mechanism driving their effectiveness remains insufficiently understood. In this paper, we revisit these strategies and uncover a shared underlying mechanism—Cross Aggregation—that effectively captures the interaction between graph topology and node attributes. Building on this insight, we propose the Universal Graph Cross-attention Transformer (UGCFormer), a universal GT framework with linear computational complexity. The idea is to interactively learn the representations of graph topology and node attributes through a linearized Dual Cross-attention (DCA) module. In theory, this module can adaptively capture interactions between these two types of graph information, thereby achieving effective aggregation. To alleviate overfitting arising from the dual-channel design, we introduce a consistency constraint that enforces representational alignment. Extensive evaluations on multiple benchmark datasets demonstrate the effectiveness and efficiency of UGCFormer.

Yichen Li, Yuying Wang, Jiahua Dong, Haozhao Wang, Yining Qi, Rui Zhang, Ruixuan Li

Federated Continual Learning (FCL) aims to enable sequential privacy-preserving model training on streams of incoming data that vary in edge devices by preserving previous knowledge while adapting to new data. Current FCL literature focuses on restricted data privacy and access to previously seen data while imposing no constraints on the training overhead. This is unreasonable for FCL applications in real-world scenarios, where edge devices are primarily constrained by resources such as storage, computational budget, and label rate. We revisit this problem with a large-scale benchmark and analyze the performance of state-of-the-art FCL approaches under different resource-constrained settings. Various typical FCL techniques and six datasets in two incremental learning scenarios (Class-IL and Domain-IL) are involved in our experiments. Through extensive experiments amounting to a total of over 1,000+ GPU hours, we find that, under limited resource-constrained settings, existing FCL approaches, with no exception, fail to achieve the expected performance. Our conclusions are consistent in the sensitivity analysis. This suggests that most existing FCL methods are particularly too resource-dependent for real-world deployment. Moreover, we study the performance of typical FCL techniques with resource constraints and shed light on future research directions in FCL.

General Machine Learning · Everything Else

Zixun Wang, Ben Dai

Semantic segmentation labels each pixel in an image with its corresponding class, and is typically evaluated using the Intersection over Union (IoU) and Dice metrics to quantify the overlap between predicted and ground-truth segmentation masks. In the literature, most existing methods estimate pixel-wise class probabilities, then apply argmax or thresholding to obtain the final prediction. These methods have been shown to generally lead to inconsistent or suboptimal results, as they do not directly maximize segmentation metrics. To address this issue, a novel consistent segmentation framework, RankSEG, has been proposed, which includes RankDice and RankIoU specifically designed to optimize the Dice and IoU metrics, respectively. Although RankSEG almost guarantees improved performance, it suffers from two major drawbacks. First, it is its computational expense—RankDice has a complexity of $\mathcal{O}(d \log d)$ with a substantial constant factor (where $d$ represents the number of pixels), while RankIoU exhibits even higher complexity $\mathcal{O}(d^2)$, thus limiting its practical application. For instance, in LiTS, prediction with RankSEG takes 16.33 seconds compared to just 0.01 seconds with the argmax rule. Second, RankSEG is only applicable to overlapping segmentation settings, where multiple classes can occupy the same pixel, which contrasts with standard benchmarks that typically assume non-overlapping segmentation. In this paper, we overcome these two drawbacks via a \textit{reciprocal moment approximation} (RMA) of RankSEG with the following contributions: (i) we improve RankSEG using RMA, namely RankSEG-RMA, reduces the complexity of both algorithms to $\mathcal{O}(d)$ while maintaining comparable performance; (ii) inspired by RMA, we develop a pixel-wise score function that allows efficient implementation for non-overlapping segmentation settings. We illustrate the effectiveness of our method across various datasets and state-of-the-art models. The code of our method is available in: \url{https://github.com/ZixunWang/RankSEG-RMA}.

Applications

Derui Zhu, Dingfan Chen, jinfu chen, Jens Grossklags, Alexander Pretschner, Weiyi Shang

Large language models (LLMs) have demonstrated remarkable progress in generating functional code, leading to numerous AI-based coding program tools. However, their reliance on the perplexity objective during both training and inference primarily emphasizes functionality, often at the expense of efficiency—an essential consideration for real-world coding tasks. Perhaps interestingly, we observed that well-trained LLMs inherently possess knowledge about code efficiency, but this potential remains underutilized with standard decoding approaches. To address this, we design strategic prompts to activate the model’s embedded efficiency understanding, effectively using LLMs as \textit{efficiency critiques} to guide code generation toward higher efficiency without sacrificing—and sometimes even improving—functionality, all without the need for costly real code execution. Extensive experiments on benchmark datasets (EffiBench, HumanEval+) across multiple representative code models demonstrate up to a 70.6\% reduction in average execution time and a 13.6\% decrease in maximum memory usage, highlighting the computational efficiency and practicality of our approach compared to existing alternatives.

Computer Vision · 3D Rendering & Reconstruction

Diego de Oliveira Hitzges, Suman Ghosh, Guillermo Gallego

Event cameras offer a promising avenue for multi-view stereo depth estimation and Simultaneous Localization And Mapping (SLAM) due to their ability to detect blur-free 3D edges at high-speed and over broad illumination conditions. However, traditional deep learning frameworks designed for conventional cameras struggle with the asynchronous, stream-like nature of event data, as their architectures are optimized for discrete, image-like inputs. We propose a scalable, flexible and adaptable framework for pixel-wise depth estimation with event cameras in both monocular and stereo setups. The 3D scene structure is encoded into disparity space images (DSIs), representing spatial densities of rays obtained by back-projecting events into space via known camera poses. Our neural network processes local subregions of the DSIs combining 3D convolutions and a recurrent structure to recognize valuable patterns for depth prediction. Local processing enables fast inference with full parallelization and ensures constant ultra-low model complexity and memory costs, regardless of camera resolution. Experiments on standard benchmarks (MVSEC and DSEC datasets) demonstrate unprecedented effectiveness: (i) using purely monocular data, our method achieves comparable results to existing stereo methods; (ii) when applied to stereo data, it strongly outperforms all state-of-the-art (SOTA) approaches, reducing the mean absolute error by at least 42\%; (iii) our method also allows for increases in depth completeness by more than 3-fold while still yielding a reduction in median absolute error of at least 30\%. Given its remarkable performance and effective processing of event-data, our framework holds strong potential to become a standard approach for using deep learning for event-based depth estimation and SLAM.

Applications · Health

Vida Adeli, Ivan Klabučar, Javad Rajabi, Benjamin Filtjens, Soroush Mehraban, Diwei Wang, Trung Hieu Hoang, Minh Do, Hyewon Seo, Candice MULLER 等

Objective gait assessment in Parkinson’s Disease (PD) is limited by the absence of large, diverse, and clinically annotated motion datasets. We introduce Care-PD, the largest publicly available archive of 3D mesh gait data for PD, and the first multi-site collection spanning 9 cohorts from 8 clinical centers. All recordings (RGB video or motion capture) are converted into anonymized SMPL meshes via a harmonized preprocessing pipeline. Care-PD supports two key benchmarks: supervised clinical score prediction (estimating Unified Parkinson’s Disease Rating Scale, UPDRS, gait scores) and unsupervised motion pretext tasks (2D-to-3D keypoint lifting and full-body 3D reconstruction). Clinical prediction is evaluated under four generalization protocols: within-dataset, cross-dataset, leave-one-dataset-out, and multi-dataset in-domain adaptation.To assess clinical relevance, we compare state-of-the-art motion encoders with a traditional gait-feature baseline, finding that encoders consistently outperform handcrafted features. Pretraining on Care-PD reduces MPJPE (from 60.8mm to 7.5mm) and boosts PD severity macro-F1 by 17\%, underscoring the value of clinically curated, diverse training data. Care-PD and all benchmark code are released for non-commercial research (Code, Data).

Applications · Health

Wang, Xiao Yang, Qingyong Hu, Jack Tang, Can Liu, Dengbo He, Yuntao Wang, Yingcong Chen, Kaishun Wu

Robust and unobtrusive in-vehicle physiological monitoring is crucial for ensuring driving safety and user experience. While remote physiological measurement (RPM) offers a promising non-invasive solution, its translation to real-world driving scenarios is critically constrained by the scarcity of comprehensive datasets. Existing resources are often limited in scale, modality diversity, the breadth of biometric annotations, and the range of captured conditions, thereby omitting inherent real-world challenges in driving. Here, we present PhysDrive, the first large-scale multimodal dataset for contactless in-vehicle physiological sensing with dedicated consideration of various modality settings and driving factors. PhysDrive collects data from 48 drivers, including synchronized RGB, near-infrared camera, and raw mmWave radar data, accompanied by six synchronized ground truths (ECG, BVP, Respiration, HR, RR, and SpO2). It covers a wide spectrum of naturalistic driving conditions, including driver motions, dynamic natural light, vehicle types, and road conditions. We extensively evaluate both signal‑processing and deep‑learning methods on PhysDrive, establishing a comprehensive benchmark across all modalities, and release full open‑source code with compatibility for mainstream public toolboxes. We envision PhysDrive will serve as a foundational resource and accelerate research on multimodal driver monitoring and smart‑cockpit systems.

Applications · Chemistry and Drug Discovery

Anastasia Vepreva, Julia Razlivina, Mariia Eremeyeva, Nina Gubina, Anastasia Orlova, Aleksei Dmitrenko, Kapranova Xenia, Susan Jyakhwo, Nikita Vasilev, Arsen Sarkisyan 等

Despite recent advances in machine learning, many scientific discoveries in chemistry still rely on manually curated datasets extracted from the scientific literature. Automation of information extraction in specialized chemistry domains has the potential to scale up machine learning applications and improve the quality of predictions, enabling data-driven scientific discoveries at a faster pace. In this paper, we present ChemX, a collection of 10 benchmarking datasets across several domains of chemistry providing a reliable basis for evaluating and fine-tuning automated information extraction methods. The datasets encompassing various properties of small molecules and nanomaterials have been manually extracted from peer-reviewed publications and systematically validated by domain experts through a cross-verification procedure allowing for identification and correction of errors at sources. In order to demonstrate the utility of the resulting datasets, we evaluate the extraction performance of the state-of-the-art large language models (LLMs). Moreover, we design our own agentic approach to take full control of the document preprocessing before LLM-based information extraction. Finally, we apply the recently emerged multi-agent systems specialized in chemistry to compare performance against the strong baselines. Our empirical results highlight persistent challenges in chemical information extraction, particularly in handling domain-specific terminology, complex tabular and schematic formats, and context-dependent ambiguities. We discuss the importance of expert data validation, the nuances of the evaluation pipeline, and the prospects of automated information extraction in chemistry. Finally, we provide open documentation including standardized schemas and provenance metadata, as well as the code and other materials to ensure reproducibility. ChemX is poised to advance automatic information extraction in chemistry by challenging the quality and generalization capabilities of existing methods, as well as providing insights into evaluation strategies.

Deep Learning · Graph Neural Networks

Bowen Fan, Yuming Ai, Xunkai Li, Zhilin Guo, LEI ZHU, Guang Zeng, Rong-Hua Li, Guoren Wang

Graph Machine Learning is essential for understanding and analyzing relational data. However, privacy-sensitive applications demand the ability to efficiently remove sensitive information from trained graph neural networks (GNNs), avoiding the unnecessary time and space overhead caused by retraining models from scratch.To address this issue, Graph Unlearning (GU) has emerged as a critical solution to support dynamic graph updates while ensuring privacy compliance. Unlike machine unlearning in computer vision or other fields, GU faces unique difficulties due to the non-Euclidean nature of graph data and the recursive message-passing mechanism of GNNs. Additionally, the diversity of downstream tasks and the complexity of unlearning requests further amplify these challenges. Despite the proliferation of diverse GU strategies, the absence of a benchmark providing fair comparisons for GU, and the limited flexibility in combining downstream tasks and unlearning requests, have yielded inconsistencies in evaluations, hindering the development of this domain. To fill this gap, we present OpenGU, the first GU benchmark, where 16 SOTA GU algorithms and 37 multi-domain datasets are integrated, enabling various downstream tasks with 13 GNN backbones when responding to flexible unlearning requests. Through extensive experimentation, we have drawn $10$ crucial conclusions about existing GU methods, while also gaining valuable insights into their limitations, shedding light on potential avenues for future research. Our code is available at \href{https://github.com/bwfan-bit/OpenGU}{https://github.com/bwfan-bit/OpenGU}.

Applications · Neuroscience, Cognitive Science

Tony Yousefnezhad

Task-based functional magnetic resonance imaging (fMRI) provides invaluable insights into human cognition but faces critical hurdles—low signal-to-noise ratio, high dimensionality, limited sample sizes, and costly data acquisition—that are amplified when integrating datasets across subjects or sites. This paper introduces orthogonal contrastive learning (OCL), a unified multi-representation framework for multi-subject fMRI analysis that aligns neural responses without requiring temporal preprocessing or uniform time-series lengths across subjects or sites. OCL employs two identical encoders: an online network trained with a contrastive loss that pulls together same-stimulus responses and pushes apart different-stimulus responses, and a target network whose weights track the online network via exponential moving average to stabilize learning. Each OCL network layer combines QR decomposition for orthogonal feature extraction, locality-sensitive hashing (LSH) to produce compact subject-specific signatures, positional encoding to embed temporal structure alongside spatial features, and a transformer encoder to generate discriminative, stimulus-aligned embeddings. We further enhance OCL with an unsupervised pretraining stage on fMRI-like synthetic data and demonstrate a transfer-learning workflow for multi-site studies. Across extensive experiments on multi-subject and multi-site fMRI benchmarks, OCL consistently outperforms state-of-the-art alignment and analysis methods in both representation quality and downstream classification accuracy.

hongyong han, Wei Wang, Gaowei Zhang, Mingjie Li, Yi Wang

Coral reefs are vital yet vulnerable ecosystems that require continuous monitoring to support conservation. While coral reef images provide essential information in coral monitoring, interpreting such images remains challenging due to the need for domain expertise. Visual Question Answering (VQA), powered by Large Vision-Language Models (LVLMs), has great potential in user-friendly interaction with coral reef images. However, applying VQA to coral imagery demands a dedicated dataset that addresses two key challenges: domain-specific annotations and multidimensional questions. In this work, we introduce CoralVQA, the first large-scale VQA dataset for coral reef analysis. It contains 12,805 real-world coral images from 67 coral genera collected from 3 oceans, along with 277,653 question-answer pairs that comprehensively assess ecological and health-related conditions. To construct this dataset, we develop a semi-automatic data construction pipeline in collaboration with marine biologists to ensure both scalability and professional-grade data quality. CoralVQA presents novel challenges and provides a comprehensive benchmark for studying vision-language reasoning in the context of coral reef images. By evaluating several state-of-the-art LVLMs, we reveal key limitations and opportunities. These insights form a foundation for future LVLM development, with a particular emphasis on supporting coral conservation efforts.