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Deep Learning/Self-Supervised Learning

Athanasios Charisoudis, Simon Ekman von Huth, Emil Jansson

Scope of Reproducibility — The Masked Autoencoder (MAE) was recently proposed as aframework for efficient self‐supervised pre‐training in Computer Vision [1]. In this pa‐per, we attempt a replication of the MAE under significant computational constraints.Specifically, we target the claim that masking out a large part of the input image yieldsa nontrivial and meaningful self‐supervisory task, which allows training models thatgeneralize well. We also present the Semantic Masked Autoencoder (SMAE), a novel yetsimple extension of MAE which uses perceptual loss to improve encoder embeddings.Methodology — The datasets and backbones we rely on are significantly smaller than thoseused by [1]. Our main experiments are performed on Tiny ImageNet (TIN) [2] and trans‐fer learning is performed on a low‐resolution version of CUB‐200‐2011 [3]. We use aViT‐Lite [4] as backbone. We also compare the MAE to DINO, an alternative frame‐work for self‐supervised learning [5]. The ViT, MAE, as well as perceptual loss wereimplemented from scratch, without consulting the original authors’ code. Our code isavailable at https://github.com/MLReproHub/SMAE. The computational budget for ourreproduction and extension was approximately 150 GPU hours.Results — This paper successfully reproduces the claim that the MAE poses a nontrivialand meaningful self‐supervisory task. We show that models trained with this frame‐work generalize well to new datasets and conclude that the MAE is reproducible withexception for some hyperparameter choices. We also demonstrate that MAE performswell with smaller backbones and datasets. Finally, our results suggest that the SMAEextension improves the downstream classification accuracy of the MAE on CUB (+5 pp)when coupled with an appropriate masking strategy.What was easy — Given prior experience with a deep learning framework, re‐implementingthe paper was relatively straightforward, with sufficient details given in the paper.What was difficult — We faced challenges implementing efficient patch shuffling and tun‐ing hyperparameters. The hyperparameter choices from [1] did not translate well to asmaller dataset and backbone.Communication with original authors — We have not had contact with the original authors.

Deep Learning/Graph Neural Networks

Zhihao Wu, Zhao Zhang, Jicong Fan

Graph convolutional networks (GCN) with one or two hidden layers have been widely used in handling graph data that are prevalent in various disciplines. Many studies showed that the gain of making GCNs deeper is tiny or even negative. This implies that the complexity of graph data is often limited and shallow models are often sufficient to extract expressive features for various tasks such as node classification. Therefore, in this work, we present a framework called graph convolutional kernel machine (GCKM) for graph-based machine learning. GCKMs are built upon kernel functions integrated with graph convolution. An example is the graph convolutional kernel support vector machine (GCKSVM) for node classification, for which we analyze the generalization error bound and discuss the impact of the graph structure. Compared to GCNs, GCKMs require much less effort in architecture design, hyperparameter tuning, and optimization. More importantly, GCKMs are guaranteed to obtain globally optimal solutions and have strong generalization ability and high interpretability. GCKMs are composable, can be extended to large-scale data, and are applicable to various tasks (e.g., node or graph classification, clustering, feature extraction, dimensionality reduction). The numerical results on benchmark datasets show that, besides the aforementioned advantages, GCKMs have at least competitive accuracy compared to GCNs.

Deep Learning/Attention Mechanisms

Zhen Qin, Songlin Yang, Yiran Zhong

Transformers have surpassed RNNs in popularity due to their superior abilities in parallel training and long-term dependency modeling.Recently, there has been a renewed interest in using linear RNNs for efficient sequence modeling.These linear RNNs often employ gating mechanisms in the output of the linear recurrence layer while ignoring the significance of using forget gates within the recurrence. In this paper, we propose a gated linear RNN model dubbed Hierarchically Gated Recurrent Neural Network (HGRN), which includes forget gates that are lower bounded by a learnable value. The lower bound increases monotonically when moving up layers. This allows the upper layers to model long-term dependencies and the lower layers to model more local, short-term dependencies. Experiments on language modeling, image classification, and long-range arena benchmarks showcase the efficiency and effectiveness of our proposed model. The source code is available at https://github.com/OpenNLPLab/HGRN.

Deep Learning/Graph Neural Networks

Namyong Park, Ryan Rossi, Xing Wang, Antoine Simoulin, Nesreen K. Ahmed, Christos Faloutsos

The choice of a graph learning (GL) model (i.e., a GL algorithm and its hyperparameter settings) has a significant impact on the performance of downstream tasks. However, selecting the right GL model becomes increasingly difficult and time consuming as more and more GL models are developed. Accordingly, it is of great significance and practical value to equip users of GL with the ability to perform a near-instantaneous selection of an effective GL model without manual intervention. Despite the recent attempts to tackle this important problem, there has been no comprehensive benchmark environment to evaluate the performance of GL model selection methods. To bridge this gap, we present GLEMOS in this work, a comprehensive benchmark for instantaneous GL model selection that makes the following contributions. (i) GLEMOS provides extensive benchmark data for fundamental GL tasks, i.e., link prediction and node classification, including the performances of 366 models on 457 graphs on these tasks. (ii) GLEMOS designs multiple evaluation settings, and assesses how effectively representative model selection techniques perform in these different settings. (iii) GLEMOS is designed to be easily extended with new models, new graphs, and new performance records. (iv) Based on the experimental results, we discuss the limitations of existing approaches and highlight future research directions. To promote research on this significant problem, we make the benchmark data and code publicly available at https://namyongpark.github.io/glemos.

Miscellaneous Aspects of Machine Learning/Transfer, Multitask and Meta-learning

Veronica Alvarez, Santiago Mazuelas, Jose A. Lozano

For a sequence of classification tasks that arrive over time, it is common that tasks are evolving in the sense that consecutive tasks often have a higher similarity. The incremental learning of a growing sequence of tasks holds promise to enable accurate classification even with few samples per task by leveraging information from all the tasks in the sequence (forward and backward learning). However, existing techniques developed for continual learning and concept drift adaptation are either designed for tasks with time-independent similarities or only aim to learn the last task in the sequence. This paper presents incremental minimax risk classifiers (IMRCs) that effectively exploit forward and backward learning and account for evolving tasks. In addition, we analytically characterize the performance improvement provided by forward and backward learning in terms of the tasks’ expected quadratic change and the number of tasks. The experimental evaluation shows that IMRCs can result in a significant performance improvement, especially for reduced sample sizes.

Miscellaneous Aspects of Machine Learning/Transfer, Multitask and Meta-learning

Insu Jeon, Minui Hong, Junhyeog Yun, Gunhee Kim

Federated Learning (FL) aims to train a global inference model from remotely distributed clients, gaining popularity due to its benefit of improving data privacy. However, traditional FL often faces challenges in practical applications, including model overfitting and divergent local models due to limited and non-IID data among clients. To address these issues, we introduce a novel Bayesian meta-learning approach called meta-variational dropout (MetaVD). MetaVD learns to predict client-dependent dropout rates via a shared hypernetwork, enabling effective model personalization of FL algorithms in limited non-IID data settings. We also emphasize the posterior adaptation view of meta-learning and the posterior aggregation view of Bayesian FL via the conditional dropout posterior. We conducted extensive experiments on various sparse and non-IID FL datasets. MetaVD demonstrated excellent classification accuracy and uncertainty calibration performance, especially for out-of-distribution (OOD) clients. MetaVD compresses the local model parameters needed for each client, mitigating model overfitting and reducing communication costs. Code is available at https://github.com/insujeon/MetaVD.

Deep Learning/Graph Neural Networks

Yannik Mahlau, Lukas Berg, Leonie Kayser

Yuan et al. claim their proposed method SubgraphX achieves (i) higher fidelity in explaining models for graph- and node classification tasks compared to other explanation techniques, namely GNNExplainer. Additionally, (ii) the computational effort of SubgraphX is at a 'reasonable level', which is not further specified by the original authors. We define this as at most ten times slower than GNNExplainer. We reimplemented the proposed algorithm in PyTorch. Then, we replicated the experiments performed by the authors on a smaller scale due to resource constraints. Additionally, we checked the performance on a new dataset and investigated the influence of hyperparameters. Lastly, we improved SubgraphX using greedy initialization and utilizing fidelity as a score function. We were able to reproduce the main claims on the MUTAG dataset, where SubgraphX has a better performance than GNNExplainer. Furthermore, SubgraphX has a reasonable runtime of about seven times longer than GNNExplainer. We successfully employed SubgraphX on the Karate Club dataset, where it outperforms GNNExplainer as well. The hyperparameter study revealed that the number of Monte-Carlo Tree search iterations and Monte-Carlo sampling steps are the most important hyperparameters and directly trade performance for runtime. Lastly, we show that our proposed improvements to SubgraphX significantly enhance fidelity and runtime. The authors' description of the algorithm was clear and concise. The original implementation is available in the DIG-library as a reference to our implementation. The authors performed extensive experiments, which we could not replicate in their full scale due to resource constraints. However, we were able to achieve similar results on a subset of the datasets used. Another issue was that despite the original code of the authors and datasets being publicly available, there were many compatibility issues. The original authors briefly reviewed our work and agreed with the findings.

Deep Learning/Robustness

Cheng-Hao Tu, Hong-You Chen, Zheda Mai, Jike Zhong, Vardaan Pahuja, Tanya Berger-Wolf, Song Gao, Charles Stewart, Yu Su, Wei-Lun (Harry) Chao

We propose a learning problem involving adapting a pre-trained source model to the target domain for classifying all classes that appeared in the source data, using target data that covers only a partial label space. This problem is practical, as it is unrealistic for the target end-users to collect data for all classes prior to adaptation. However, it has received limited attention in the literature. To shed light on this issue, we construct benchmark datasets and conduct extensive experiments to uncover the inherent challenges. We found a dilemma --- on the one hand, adapting to the new target domain is important to claim better performance; on the other hand, we observe that preserving the classification accuracy of classes missing in the target adaptation data is highly challenging, let alone improving them. To tackle this, we identify two key directions: 1) disentangling domain gradients from classification gradients, and 2) preserving class relationships. We present several effective solutions that maintain the accuracy of the missing classes and enhance the overall performance, establishing solid baselines for holistic transfer of pre-trained models with partial target data.

Miscellaneous Aspects of Machine Learning/General Machine Learning Techniques

Federico Matteucci, Vadim Arzamasov, Klemens Böhm

Categorical encoders transform categorical features into numerical representations that are indispensable for a wide range of machine learning models.Existing encoder benchmark studies lack generalizability because of their limited choice of (1) encoders, (2) experimental factors, and (3) datasets. Additionally, inconsistencies arise from the adoption of varying aggregation strategies.This paper is the most comprehensive benchmark of categorical encoders to date, including an extensive evaluation of 32 configurations of encoders from diverse families, with 36 combinations of experimental factors, and on 50 datasets.The study shows the profound influence of dataset selection, experimental factors, and aggregation strategies on the benchmark's conclusions~---~aspects disregarded in previous encoder benchmarks.Our code is available at \url{https://github.com/DrCohomology/EncoderBenchmarking}.

Deep Learning/Graph Neural Networks

Qian Huang, Hongyu Ren, Peng Chen, Gregor Kržmanc, Daniel Zeng, Percy Liang, Jure Leskovec

In-context learning is the ability of a pretrained model to adapt to novel and diverse downstream tasks by conditioning on prompt examples, without optimizing any parameters. While large language models have demonstrated this ability, how in-context learning could be performed over graphs is unexplored. In this paper, we develop \textbf{Pr}etraining \textbf{O}ver \textbf{D}iverse \textbf{I}n-Context \textbf{G}raph S\textbf{y}stems (PRODIGY), the first pretraining framework that enables in-context learning over graphs. The key idea of our framework is to formulate in-context learning over graphs with a novel \emph{prompt graph} representation, which connects prompt examples and queries. We then propose a graph neural network architecture over the prompt graph and a corresponding family of in-context pretraining objectives. With PRODIGY, the pretrained model can directly perform novel downstream classification tasks on unseen graphs via in-context learning. We provide empirical evidence of the effectiveness of our framework by showcasing its strong in-context learning performance on tasks involving citation networks and knowledge graphs. Our approach outperforms the in-context learning accuracy of contrastive pretraining baselines with hard-coded adaptation by 18\% on average across all setups. Moreover, it also outperforms standard finetuning with limited data by 33\% on average with in-context learning.

Deep Learning/Graph Neural Networks

Junliang Li, Yang Yajun, Qinghua Hu, Xin Wang, Hong Gao

Trending topic diffusion and prediction analysis is an important problem and has been well studied in social networks. Representation learning is an effective way to extract node embeddings, which can help for topic propagation analysis by completing downstream tasks such as link prediction and node classification. In real world, there are often several trending topics or opinion leaders in public opinion space at the same time and they can be regarded as different centers of public opinion. A public opinion field will be formed surrounding every center. These public opinion fields compete for public's attention and it will potentially affect the development of public opinion. However, the existing methods do not consider public opinion field effect for trending topics diffusion. In this paper, we introduce three well-known observations about public opinion field effect in media and communication studies, and propose a novel and effective heterogeneous representation learning framework to incorporate public opinion field effect and social circle influence effect. To the best of our knowledge, our work is the first to consider these effects in representation learning for trending topic diffusion. Extensive experiments on real-world datasets validate the superiority of our model.

Miscellaneous Aspects of Machine Learning/Transfer, Multitask and Meta-learning

Soochan Lee, Jaehyeon Son, Gunhee Kim

In this work, we aim to establish a strong connection between two significant bodies of machine learning research: continual learning and sequence modeling.That is, we propose to formulate continual learning as a sequence modeling problem, allowing advanced sequence models to be utilized for continual learning.Under this formulation, the continual learning process becomes the forward pass of a sequence model.By adopting the meta-continual learning (MCL) framework, we can train the sequence model at the meta-level, on multiple continual learning episodes.As a specific example of our new formulation, we demonstrate the application of Transformers and their efficient variants as MCL methods.Our experiments on seven benchmarks, covering both classification and regression, show that sequence models can be an attractive solution for general MCL.

Deep Learning/Other Representation Learning

Vedant Nanda, Till Speicher, John Dickerson, Krishna Gummadi, Soheil Feizi, Adrian Weller

Representations learned by pre-training a neural network on a large dataset are increasingly used successfully to perform a variety of downstream tasks. In this work, we take a closer look at how features are encoded in such pre-trained representations. We find that learned representations in a given layer exhibit a degree of diffuse redundancy, ie, any randomly chosen subset of neurons in the layer that is larger than a threshold size shares a large degree of similarity with the full layer and is able to perform similarly as the whole layer on a variety of downstream tasks. For example, a linear probe trained on $20\%$ of randomly picked neurons from the penultimate layer of a ResNet50 pre-trained on ImageNet1k achieves an accuracy within $5\%$ of a linear probe trained on the full layer of neurons for downstream CIFAR10 classification. We conduct experiments on different neural architectures (including CNNs and Transformers) pre-trained on both ImageNet1k and ImageNet21k and evaluate a variety of downstream tasks taken from the VTAB benchmark. We find that the loss \& dataset used during pre-training largely govern the degree of diffuse redundancy and the "critical mass" of neurons needed often depends on the downstream task, suggesting that there is a task-inherent redundancy-performance Pareto frontier. Our findings shed light on the nature of representations learned by pre-trained deep neural networks and suggest that entire layers might not be necessary to perform many downstream tasks. We investigate the potential for exploiting this redundancy to achieve efficient generalization for downstream tasks and also draw caution to certain possible unintended consequences. Our code is available at \url{https://github.com/nvedant07/diffused-redundancy}.

Theory/Domain Adaptation and Transfer Learning

Ruicheng Xian, Honglei Zhuang, Zhen Qin, Hamed Zamani, Jing Lu, Ji Ma, Kai Hui, Han Zhao, Xuanhui Wang, Michael Bendersky

Domain adaptation aims to transfer the knowledge learned on (data-rich) source domains to (low-resource) target domains, and a popular method is invariant representation learning, which matches and aligns the data distributions on the feature space. Although this method is studied extensively and applied on classification and regression problems, its adoption on ranking problems is sporadic, and the few existing implementations lack theoretical justifications. This paper revisits invariant representation learning for ranking. Upon reviewing prior work, we found that they implement what we call item-level alignment, which aligns the distributions of the items being ranked from all lists in aggregate but ignores their list structure. However, the list structure should be leveraged, because it is intrinsic to ranking problems where the data and the metrics are defined and computed on lists, not the items by themselves. To close this discrepancy, we propose list-level alignment—learning domain-invariant representations at the higher level of lists. The benefits are twofold: it leads to the first domain adaptation generalization bound for ranking, in turn providing theoretical support for the proposed method, and it achieves better empirical transfer performance for unsupervised domain adaptation on ranking tasks, including passage reranking.

Applications/Health

Chenyu You, Weicheng Dai, Yifei Min, Fenglin Liu, David Clifton, S. Kevin Zhou, Lawrence Staib, James Duncan

For medical image segmentation, contrastive learning is the dominant practice to improve the quality of visual representations by contrasting semantically similar and dissimilar pairs of samples. This is enabled by the observation that without accessing ground truth labels, negative examples with truly dissimilar anatomical features, if sampled, can significantly improve the performance. In reality, however, these samples may come from similar anatomical features and the models may struggle to distinguish the minority tail-class samples, making the tail classes more prone to misclassification, both of which typically lead to model collapse. In this paper, we propose $\texttt{ARCO}$, a semi-supervised contrastive learning (CL) framework with stratified group theory for medical image segmentation. In particular, we first propose building $\texttt{ARCO}$ through the concept of variance-reduced estimation, and show that certain variance-reduction techniques are particularly beneficial in pixel/voxel-level segmentation tasks with extremely limited labels. Furthermore, we theoretically prove these sampling techniques are universal in variance reduction. Finally, we experimentally validate our approaches on eight benchmarks, i.e., five 2D/3D medical and three semantic segmentation datasets, with different label settings, and our methods consistently outperform state-of-the-art semi-supervised methods. Additionally, we augment the CL frameworks with these sampling techniques and demonstrate significant gains over previous methods. We believe our work is an important step towards semi-supervised medical image segmentation by quantifying the limitation of current self-supervision objectives for accomplishing such challenging safety-critical tasks.

Deep Learning/Generative Models and Autoencoders

James Oldfield, Christos Tzelepis, Yannis Panagakis, Mihalis Nicolaou, Ioannis Patras

Latent image representations arising from vision-language models have proved immensely useful for a variety of downstream tasks. However, their utility is limited by their entanglement with respect to different visual attributes. For instance, recent work has shown that CLIP image representations are often biased toward specific visual properties (such as objects or actions) in an unpredictable manner. In this paper, we propose to separate representations of the different visual modalities in CLIP’s joint vision-language space by leveraging the association between parts of speech and specific visual modes of variation (e.g. nouns relate to objects, adjectives describe appearance). This is achieved by formulating an appropriate component analysis model that learns subspaces capturing variability corresponding to a specific part of speech, while jointly minimising variability to the rest. Such a subspace yields disentangled representations of the different visual properties of an image or text in closed form while respecting the underlying geometry of the manifold on which the representations lie. What’s more, we show the proposed model additionally facilitates learning subspaces corresponding to specific visual appearances (e.g. artists’ painting styles), which enables the selective removal of entire visual themes from CLIP-based text-to-image synthesis. We validate the model both qualitatively, by visualising the subspace projections with a text-to-image model and by preventing the imitation of artists’ styles, and quantitatively, through class invariance metrics and improvements to baseline zero-shot classification.

Miscellaneous Aspects of Machine Learning/Transfer, Multitask and Meta-learning

Dapeng Hu, Jian Liang, Jun Hao Liew, Chuhui Xue, Song Bai, Xinchao Wang

Unsupervised domain adaptation (UDA) has been widely applied in improving model generalization on unlabeled target data. However, accurately selecting the best UDA model for the target domain is challenging due to the absence of labeled target data and domain distribution shifts. Traditional model selection approaches involve training extra models with source data to estimate the target validation risk. Recent studies propose practical methods that are based on measuring various properties of model predictions on target data. Although effective for some UDA models, these methods often lack stability and may lead to poor selections for other UDA models.In this paper, we present MixVal, an innovative model selection method that operates solely with unlabeled target data during inference. MixVal leverages mixed target samples with pseudo labels to directly probe the learned target structure by each UDA model. Specifically, MixVal employs two distinct types of probes: the intra-cluster mixed samples for evaluating neighborhood density and the inter-cluster mixed samples for investigating the classification boundary. With this comprehensive probing strategy, MixVal elegantly combines the strengths of two state-of-the-art model selection methods, Entropy and SND. We extensively evaluate MixVal on 11 UDA methods across 4 adaptation settings, including classification and segmentation tasks. Experimental results consistently demonstrate that MixVal achieves state-of-the-art performance and maintains exceptional stability in model selection. Code is available at \url{https://github.com/LHXXHB/MixVal}.

Social Aspects/Accountability, Transparency and Interpretability

Chiyu Ma, Brandon Zhao, Chaofan Chen, Cynthia Rudin

We present ProtoConcepts, a method for interpretable image classification combining deep learning and case-based reasoning using prototypical parts. Existing work in prototype-based image classification uses a "this looks like that'' reasoning process, which dissects a test image by finding prototypical parts and combining evidence from these prototypes to make a final classification. However, all of the existing prototypical part-based image classifiers provide only one-to-one comparisons, where a single training image patch serves as a prototype to compare with a part of our test image. With these single-image comparisons, it can often be difficult to identify the underlying concept being compared (e.g., "is it comparing the color or the shape?''). Our proposed method modifies the architecture of prototype-based networks to instead learn prototypical concepts which are visualized using multiple image patches. Having multiple visualizations of the same prototype allows us to more easily identify the concept captured by that prototype (e.g., "the test image and the related training patches are all the same shade of blue''), and allows our model to create richer, more interpretable visual explanations. Our experiments show that our ``this looks like those'' reasoning process can be applied as a modification to a wide range of existing prototypical image classification networks while achieving comparable accuracy on benchmark datasets.

Bowen Tan, Yun Zhu, Lijuan Liu, Eric Xing, Zhiting Hu, Jindong Chen

Large language models (LLMs) such as T0, FLAN, and OPT-IML excel in multi-tasking under a unified instruction-following paradigm, where they also exhibit remarkable generalization abilities to unseen tasks. Despite their impressive performance, these LLMs, with sizes ranging from several billion to hundreds of billions of parameters, demand substantial computational resources, making their training and inference expensive and inefficient. Furthermore, adapting these models to downstream applications, particularly complex tasks, is often unfeasible due to the extensive hardware requirements for finetuning, even when utilizing parameter-efficient approaches such as prompt tuning. Additionally, the most powerful multi-task LLMs, such as OPT-IML-175B and FLAN-PaLM-540B, are not publicly accessible, severely limiting their customization potential. To address these challenges, we introduce a pretrained small scorer, \textit{Cappy}, designed to enhance the performance and efficiency of multi-task LLMs. With merely 360 million parameters, Cappy functions either independently on classification tasks or serve as an auxiliary component for LLMs, boosting their performance. Moreover, Cappy enables efficiently integrating downstream supervision without requiring LLM finetuning nor the access to their parameters. Our experiments demonstrate that, when working independently on 11 language understanding tasks from PromptSource, Cappy outperforms LLMs that are several orders of magnitude larger. Besides, on 45 complex tasks from BIG-Bench, Cappy boosts the performance of the advanced multi-task LLM, FLAN-T5, by a large margin. Furthermore, Cappy is flexible to cooperate with other LLM adaptations, including finetuning and in-context learning, offering additional performance enhancement.

Ermin Omeragic, Vuk Đuranović

Scope of ReproducibilityThis paper presents a novel augmentation method that can be used for graph classification tasks: $\mathcal{G}$-Mixup. Our goal is to reproduce eight claims that the authors make in their paper. The first two claims relate to the properties of graphons estimated from graphs, which are the main components of the method. Claims three to eight relate to the superior performance of the method compared to other augmentation strategies.MethodologyTo reproduce the results, we use the open-source implementation of the method provided by the authors, with a few modifications. We write from scratch all the experiments and pipelines needed to defend the claims of the paper. Additionally, we implement three out of four baseline augmentation methods that are compared to the novel method. For one part of the experiments, we use a local computer and run the experiments on a CPU, with a total of 31.7 CPU hours, while for other more demanding experiments, we use a GPU-accelerated machine for a total of 157.3 GPU hours.ResultsDue to many missing implementation details, we were not able to reproduce all of the original results. Some claims can be supported by our results, but most results are very vague. Even though the new method outperforms the baselines in certain scenarios, we find that the superiority of the method is not as strong as presented in the original paper.What was easyThe novel augmentation method and its theoretical justification are presented intuitively in the paper, and it was easy to grasp the main ideas of the paper.What was difficultWhile the code with the method implementation was given, the reproduction of all the results required much more code and details than what was provided in the paper. This means that we had to make a lot of educated guesses about the experimental settings, choices of hyperparameters, and details about the models used. Communication with original authorsWe contacted the authors on two occasions. The first time was very early in the reproduction process, when we asked about the details of the graph estimation methods that they used and which weren't explained in the paper, to which they responded swiftly. On the second occasion, we asked about the experimental settings and hyperparameter details, but we did not receive a reply.