论文检索

Applications/Chemistry and Drug Discovery

Xiang Zhuang, Qiang Zhang, Keyan Ding, Yatao Bian, Xiao Wang, Jingsong Lv, Hongyang Chen, Huajun Chen

Molecular representation learning lays the foundation for drug discovery. However, existing methods suffer from poor out-of-distribution (OOD) generalization, particularly when data for training and testing originate from different environments. To address this issue, we propose a new framework for learning molecular representations that exhibit invariance and robustness against distribution shifts. Specifically, we propose a strategy called ``first-encoding-then-separation'' to identify invariant molecule features in the latent space, which deviates from conventional practices. Prior to the separation step, we introduce a residual vector quantization module that mitigates the over-fitting to training data distributions while preserving the expressivity of encoders. Furthermore, we design a task-agnostic self-supervised learning objective to encourage precise invariance identification, which enables our method widely applicable to a variety of tasks, such as regression and multi-label classification. Extensive experiments on 18 real-world molecular datasets demonstrate that our model achieves stronger generalization against state-of-the-art baselines in the presence of various distribution shifts. Our code is available at https://github.com/HICAI-ZJU/iMoLD.

Deep Learning/Self-Supervised Learning

Thalles Santos Silva, Adín Ramírez Rivera

We present Consistent Assignment of Views over Random Partitions (CARP), a self-supervised clustering method for representation learning of visual features. CARP learns prototypes in an end-to-end online fashion using gradient descent without additional non-differentiable modules to solve the cluster assignment problem. CARP optimizes a new pretext task based on random partitions of prototypes that regularizes the model and enforces consistency between views' assignments. Additionally, our method improves training stability and prevents collapsed solutions in joint-embedding training. Through an extensive evaluation, we demonstrate that CARP's representations are suitable for learning downstream tasks. We evaluate CARP's representations capabilities in 17 datasets across many standard protocols, including linear evaluation, few-shot classification, $k$-NN, $k$-means, image retrieval, and copy detection. We compare CARP performance to 11 existing self-supervised methods. We extensively ablate our method and demonstrate that our proposed random partition pretext task improves the quality of the learned representations by devising multiple random classification tasks.In transfer learning tasks, CARP achieves the best performance on average against many SSL methods trained for a longer time.

Deep Learning/Other Representation Learning

Changdae Oh, Junhyuk So, Hoyoon Byun, YongTaek Lim, Minchul Shin, Jong-June Jeon, Kyungwoo Song

Pre-trained multi-modal models, such as CLIP, provide transferable embeddings and show promising results in diverse applications. However, the analysis of learned multi-modal embeddings is relatively unexplored, and the embedding transferability can be improved. In this work, we observe that CLIP holds separated embedding subspaces for two different modalities, and then we investigate it through the lens of \textit{uniformity-alignment} to measure the quality of learned representation. Both theoretically and empirically, we show that CLIP retains poor uniformity and alignment even after fine-tuning. Such a lack of alignment and uniformity might restrict the transferability and robustness of embeddings. To this end, we devise a new fine-tuning method for robust representation equipping better alignment and uniformity. First, we propose a \textit{Geodesic Multi-Modal Mixup} that mixes the embeddings of image and text to generate hard negative samples on the hypersphere. Then, we fine-tune the model on hard negatives as well as original negatives and positives with contrastive loss. Based on the theoretical analysis about hardness guarantee and limiting behavior, we justify the use of our method. Extensive experiments on retrieval, calibration, few- or zero-shot classification (under distribution shift), embedding arithmetic, and image captioning further show that our method provides transferable representations, enabling robust model adaptation on diverse tasks.

Deep Learning/Robustness

Samuel Pfrommer, Brendon Anderson, Julien Piet, Somayeh Sojoudi

Real-world adversarial attacks on machine learning models often feature an asymmetric structure wherein adversaries only attempt to induce false negatives (e.g., classify a spam email as not spam). We formalize the asymmetric robustness certification problem and correspondingly present the feature-convex neural network architecture, which composes an input-convex neural network (ICNN) with a Lipschitz continuous feature map in order to achieve asymmetric adversarial robustness. We consider the aforementioned binary setting with one "sensitive" class, and for this class we prove deterministic, closed-form, and easily-computable certified robust radii for arbitrary $\ell_p$-norms. We theoretically justify the use of these models by characterizing their decision region geometry, extending the universal approximation theorem for ICNN regression to the classification setting, and proving a lower bound on the probability that such models perfectly fit even unstructured uniformly distributed data in sufficiently high dimensions. Experiments on Malimg malware classification and subsets of the MNIST, Fashion-MNIST, and CIFAR-10 datasets show that feature-convex classifiers attain substantial certified $\ell_1$, $\ell_2$, and $\ell_{\infty}$-radii while being far more computationally efficient than competitive baselines.

Probabilistic Methods

Sebastian Salazar

Decision trees are a well-established tool in machine learning for classification and regression tasks. In this paper, we introduce a novel non-parametric Bayesian model that uses variational inference to approximate a posterior distribution over the space of stochastic decision trees. We evaluate the model's performance on 18 datasets and demonstrate its competitiveness with other state-of-the-art methods in regression tasks. We also explore its application to causal inference problems. We provide a fully vectorized implementation of our algorithm in PyTorch.

Applications/Computer Vision

Mohammad Salameh, Keith Mills, Negar Hassanpour, Fred Han, Shuting Zhang, Wei Lu, Shangling Jui, CHUNHUA ZHOU, Fengyu Sun, Di Niu

Optimizing Deep Neural Networks (DNNs) to obtain high-quality models for efficient real-world deployment has posed multi-faceted challenges to machine learning engineers. Existing methods either search for neural architectures in heuristic design spaces or apply low-level adjustments to computation primitives to improve inference efficiency on hardware. We present Automated Graph Optimization (AutoGO), a framework to evolve neural networks in a low-level Computation Graph (CG) of primitive operations to improve both its performance and hardware friendliness. Through a tokenization scheme, AutoGO performs variable-sized segment mutations, making both primitive changes and larger-grained changes to CGs. We introduce our segmentation and mutation algorithms, efficient frequent segment mining technique, as well as a pretrained context-aware predictor to estimate the impact of segment replacements. Extensive experimental results show that AutoGO can automatically evolve several typical large convolutional networks to achieve significant task performance improvement and FLOPs reduction on a range of CV tasks, ranging from Classification, Semantic Segmentation, Human Pose Estimation, to Super Resolution, yet without introducing any newer primitive operations. We also demonstrate the lightweight deployment results of AutoGO-optimized super-resolution and denoising U-Nets on a cycle simulator for a Neural Processing Unit (NPU), achieving PSNR improvement and latency/power reduction simultaneously. Code available at https://github.com/Ascend-Research/AutoGO.

Applications/Climate

Anthony Fuller, Koreen Millard, James Green

A vital and rapidly growing application, remote sensing offers vast yet sparsely labeled, spatially aligned multimodal data; this makes self-supervised learning algorithms invaluable. We present CROMA: a framework that combines contrastive and reconstruction self-supervised objectives to learn rich unimodal and multimodal representations. Our method separately encodes masked-out multispectral optical and synthetic aperture radar samples—aligned in space and time—and performs cross-modal contrastive learning. Another encoder fuses these sensors, producing joint multimodal encodings that are used to predict the masked patches via a lightweight decoder. We show that these objectives are complementary when leveraged on spatially aligned multimodal data. We also introduce X- and 2D-ALiBi, which spatially biases our cross- and self-attention matrices. These strategies improve representations and allow our models to effectively extrapolate to images up to $17.6\times$ larger at test-time. CROMA outperforms the current SoTA multispectral model, evaluated on: four classification benchmarks—finetuning (avg.$\uparrow$ 1.8%), linear (avg.$\uparrow$ 2.4%) and nonlinear (avg.$\uparrow$ 1.4%) probing, $k$NN classification (avg.$\uparrow$ 3.5%), and $K$-means clustering (avg.$\uparrow$ 8.4%); and three segmentation benchmarks (avg.$\uparrow$ 6.4%). CROMA’s rich, optionally multimodal representations can be widely leveraged across remote sensing applications.

Chen Sun, Calvin Luo, Xingyi Zhou, Anurag Arnab, Cordelia Schmid

We aim to investigate whether end-to-end learning of visual reasoning can be achieved with general-purpose neural networks, with the help of visual pretraining. A positive result would refute the common belief that explicit visual abstraction (e.g. object detection) is essential for compositional generalization on visual reasoning, and confirm the feasibility of a neural network ''generalist'' to solve visual recognition and reasoning tasks. We propose a simple and general self-supervised framework which ''compresses'' each video frame into a small set of tokens with a transformer network, and reconstructs the remaining frames based on the compressed temporal context. To minimize the reconstruction loss, the network must learn a compact representation for each image, as well as capture temporal dynamics and object permanence from temporal context. We perform evaluation on two visual reasoning benchmarks, CATER and ACRE. We observe that pretraining is essential to achieve compositional generalization for end-to-end visual reasoning. Our proposed framework outperforms traditional supervised pretraining, including image classification and explicit object detection, by large margins.

Optimization/Large Scale, Parallel and Distributed

Xidong Wu, Jianhui Sun, Zhengmian Hu, Aidong Zhang, Heng Huang

The minimax problems arise throughout machine learning applications, ranging from adversarial training and policy evaluation in reinforcement learning to AUROC maximization. To address the large-scale distributed data challenges across multiple clients with communication-efficient distributed training, federated learning (FL) is gaining popularity. Many optimization algorithms for minimax problems have been developed in the centralized setting (\emph{i.e.}, single-machine). Nonetheless, the algorithm for minimax problems under FL is still underexplored. In this paper, we study a class of federated nonconvex minimax optimization problems. We propose FL algorithms (FedSGDA+ and FedSGDA-M) and reduce existing complexity results for the most common minimax problems. For nonconvex-concave problems, we propose FedSGDA+ and reduce the communication complexity to $O(\varepsilon^{-6})$. Under nonconvex-strongly-concave and nonconvex-PL minimax settings, we prove that FedSGDA-M has the best-known sample complexity of $O(\kappa^{3} N^{-1}\varepsilon^{-3})$ and the best-known communication complexity of $O(\kappa^{2}\varepsilon^{-2})$. FedSGDA-M is the first algorithm to match the best sample complexity $O(\varepsilon^{-3})$ achieved by the single-machine method under the nonconvex-strongly-concave setting. Extensive experimental results on fair classification and AUROC maximization show the efficiency of our algorithms.

Social Aspects/Trustworthy Machine Learning

Yucheng Shi, Mengnan Du, Xuansheng Wu, Zihan Guan, Jin Sun, Ninghao Liu

Backdoor attacks inject poisoned samples into the training data, resulting in the misclassification of the poisoned input during a model's deployment. Defending against such attacks is challenging, especially for real-world black-box models where only query access is permitted. In this paper, we propose a novel defense framework against backdoor attacks through Zero-shot Image Purification (ZIP). Our framework can be applied to poisoned models without requiring internal information about the model or any prior knowledge of the clean/poisoned samples. Our defense framework involves two steps. First, we apply a linear transformation (e.g., blurring) on the poisoned image to destroy the backdoor pattern. Then, we use a pre-trained diffusion model to recover the missing semantic information removed by the transformation. In particular, we design a new reverse process by using the transformed image to guide the generation of high-fidelity purified images, which works in zero-shot settings. We evaluate our ZIP framework on multiple datasets with different types of attacks. Experimental results demonstrate the superiority of our ZIP framework compared to state-of-the-art backdoor defense baselines. We believe that our results will provide valuable insights for future defense methods for black-box models. Our code is available at https://github.com/sycny/ZIP.

Deep Learning/Theory

Dian Wang, Xupeng Zhu, Jung Yeon Park, Mingxi Jia, Guanang Su, Robert Platt, Robin Walters

Although equivariant machine learning has proven effective at many tasks, success depends heavily on the assumption that the ground truth function is symmetric over the entire domain matching the symmetry in an equivariant neural network. A missing piece in the equivariant learning literature is the analysis of equivariant networks when symmetry exists only partially in the domain. In this work, we present a general theory for such a situation. We propose pointwise definitions of correct, incorrect, and extrinsic equivariance, which allow us to quantify continuously the degree of each type of equivariance a function displays. We then study the impact of various degrees of incorrect or extrinsic symmetry on model error. We prove error lower bounds for invariant or equivariant networks in classification or regression settings with partially incorrect symmetry. We also analyze the potentially harmful effects of extrinsic equivariance. Experiments validate these results in three different environments.

Social Aspects/Fairness, Equity, Justice and Safety

Raymond Feng, Flavio Calmon, Hao Wang

Missing values in real-world data pose a significant and unique challenge to algorithmic fairness. Different demographic groups may be unequally affected by missing data, and the standard procedure for handling missing values where first data is imputed, then the imputed data is used for classification—a procedure referred to as "impute-then-classify"—can exacerbate discrimination. In this paper, we analyze how missing values affect algorithmic fairness. We first prove that training a classifier from imputed data can significantly worsen the achievable values of group fairness and average accuracy. This is because imputing data results in the loss of the missing pattern of the data, which often conveys information about the predictive label. We present scalable and adaptive algorithms for fair classification with missing values. These algorithms can be combined with any preexisting fairness-intervention algorithm to handle all possible missing patterns while preserving information encoded within the missing patterns. Numerical experiments with state-of-the-art fairness interventions demonstrate that our adaptive algorithms consistently achieve higher fairness and accuracy than impute-then-classify across different datasets.

Xiaojun Guo, Yifei Wang, Zeming Wei, Yisen Wang

With the prosperity of contrastive learning for visual representation learning (VCL), it is also adapted to the graph domain and yields promising performance. However, through a systematic study of various graph contrastive learning (GCL) methods, we observe that some common phenomena among existing GCL methods that are quite different from the original VCL methods, including 1) positive samples are not a must for GCL; 2) negative samples are not necessary for graph classification, neither for node classification when adopting specific normalization modules; 3) data augmentations have much less influence on GCL, as simple domain-agnostic augmentations (e.g., Gaussian noise) can also attain fairly good performance. By uncovering how the implicit inductive bias of GNNs works in contrastive learning, we theoretically provide insights into the above intriguing properties of GCL. Rather than directly porting existing VCL methods to GCL, we advocate for more attention toward the unique architecture of graph learning and consider its implicit influence when designing GCL methods. Code is available at https://github.com/PKU-ML/ArchitectureMattersGCL.

Miscellaneous Aspects of Machine Learning/Transfer, Multitask and Meta-learning

Tongtong Fang, Nan Lu, Gang Niu, Masashi Sugiyama

Distribution shift (DS) may have two levels: the distribution itself changes, and the support (i.e., the set where the probability density is non-zero) also changes. When considering the support change between the training and test distributions, there can be four cases: (i) they exactly match; (ii) the training support is wider (and thus covers the test support); (iii) the test support is wider; (iv) they partially overlap. Existing methods are good at cases (i) and (ii), while cases (iii) and (iv) are more common nowadays but still under-explored. In this paper, we generalize importance weighting (IW), a golden solver for cases (i) and (ii), to a universal solver for all cases. Specifically, we first investigate why IW might fail in cases (iii) and (iv); based on the findings, we propose generalized IW (GIW) that could handle cases (iii) and (iv) and would reduce to IW in cases (i) and (ii). In GIW, the test support is split into an in-training (IT) part and an out-of-training (OOT) part, and the expected risk is decomposed into a weighted classification term over the IT part and a standard classification term over the OOT part, which guarantees the risk consistency of GIW. Then, the implementation of GIW consists of three components: (a) the split of validation data is carried out by the one-class support vector machine, (b) the first term of the empirical risk can be handled by any IW algorithm given training data and IT validation data, and (c) the second term just involves OOT validation data. Experiments demonstrate that GIW is a universal solver for DS problems, outperforming IW methods in cases (iii) and (iv).

Deep Learning

Jiawei Fan, Chao Li, Xiaolong Liu, Meina Song, Anbang Yao

In recent years, knowledge distillation methods based on contrastive learning have achieved promising results on image classification and object detection tasks. However, in this line of research, we note that less attention is paid to semantic segmentation. Existing methods heavily rely on data augmentation and memory buffer, which entail high computational resource demands when applying them to handle semantic segmentation that requires to preserve high-resolution feature maps for making dense pixel-wise predictions. In order to address this problem, we present Augmentation-free Dense Contrastive Knowledge Distillation (Af-DCD), a new contrastive distillation learning paradigm to train compact and accurate deep neural networks for semantic segmentation applications. Af-DCD leverages a masked feature mimicking strategy, and formulates a novel contrastive learning loss via taking advantage of tactful feature partitions across both channel and spatial dimensions, allowing to effectively transfer dense and structured local knowledge learnt by the teacher model to a target student model while maintaining training efficiency. Extensive experiments on five mainstream benchmarks with various teacher-student network pairs demonstrate the effectiveness of our approach. For instance, DeepLabV3-Res18|DeepLabV3-MBV2 model trained by Af-DCD reaches 77.03\%|76.38\% mIOU on Cityscapes dataset when choosing DeepLabV3-Res101 as the teacher, setting new performance records. Besides that, Af-DCD achieves an absolute mIOU improvement of 3.26\%|3.04\%|2.75\%|2.30\%|1.42\% compared with individually trained counterpart on Cityscapes|Pascal VOC|Camvid|ADE20K|COCO-Stuff-164K. Code is available at https://github.com/OSVAI/Af-DCD.

Social Aspects/Privacy-preserving Statistics and Machine Learning

Xinyu Tang, Ashwinee Panda, Vikash Sehwag, Prateek Mittal

In privacy-preserving machine learning, differentially private stochastic gradient descent (DP-SGD) performs worse than SGD due to per-sample gradient clipping and noise addition.A recent focus in private learning research is improving the performance of DP-SGD on private data by incorporating priors that are learned on real-world public data.In this work, we explore how we can improve the privacy-utility tradeoff of DP-SGD by learning priors from images generated by random processes and transferring these priors to private data. We propose DP-RandP, a three-phase approach. We attain new state-of-the-art accuracy when training from scratch on CIFAR10, CIFAR100, MedMNIST and ImageNet for a range of privacy budgets $\\varepsilon \\in [1, 8]$. In particular, we improve the previous best reported accuracy on CIFAR10 from $60.6 \\%$ to $72.3 \\%$ for $\\varepsilon=1$.

Applications/Computer Vision

Junyi Zhang, Charles Herrmann, Junhwa Hur, Luisa Polania Cabrera, Varun Jampani, Deqing Sun, Ming-Hsuan Yang

Text-to-image diffusion models have made significant advances in generating and editing high-quality images. As a result, numerous approaches have explored the ability of diffusion model features to understand and process single images for downstream tasks, e.g., classification, semantic segmentation, and stylization. However, significantly less is known about what these features reveal across multiple, different images and objects. In this work, we exploit Stable Diffusion (SD) features for semantic and dense correspondence and discover that with simple post-processing, SD features can perform quantitatively similar to SOTA representations. Interestingly, the qualitative analysis reveals that SD features have very different properties compared to existing representation learning features, such as the recently released DINOv2: while DINOv2 provides sparse but accurate matches, SD features provide high-quality spatial information but sometimes inaccurate semantic matches. We demonstrate that a simple fusion of these two features works surprisingly well, and a zero-shot evaluation using nearest neighbors on these fused features provides a significant performance gain over state-of-the-art methods on benchmark datasets, e.g., SPair-71k, PF-Pascal, and TSS. We also show that these correspondences can enable interesting applications such as instance swapping in two images. Project page: https://sd-complements-dino.github.io/.

Deep Learning/Graph Neural Networks

Ali Behrouz, Farnoosh Hashemi, Sadaf Sadeghian, Margo Seltzer

Temporal hypergraphs provide a powerful paradigm for modeling time-dependent, higher-order interactions in complex systems. Representation learning for hypergraphs is essential for extracting patterns of the higher-order interactions that are critically important in real-world problems in social network analysis, neuroscience, finance, etc. However, existing methods are typically designed only for specific tasks or static hypergraphs. We present CAT-Walk, an inductive method that learns the underlying dynamic laws that govern the temporal and structural processes underlying a temporal hypergraph. CAT-Walk introduces a temporal, higher-order walk on hypergraphs, SetWalk, that extracts higher-order causal patterns. CAT-Walk uses a novel adaptive and permutation invariant pooling strategy, SetMixer, along with a set-based anonymization process that hides the identity of hyperedges. Finally, we present a simple yet effective neural network model to encode hyperedges. Our evaluation on 10 hypergraph benchmark datasets shows that CAT-Walk attains outstanding performance on temporal hyperedge prediction benchmarks in both inductive and transductive settings. It also shows competitive performance with state-of-the-art methods for node classification. (https://github.com/ubc-systopia/CATWalk)

Deep Learning/Graph Neural Networks

Haitao Mao, Zhikai Chen, Wei Jin, Haoyu Han, Yao Ma, Tong Zhao, Neil Shah, Jiliang Tang

Recent studies on Graph Neural Networks(GNNs) provide both empirical and theoretical evidence supporting their effectiveness in capturing structural patterns on both homophilic and certain heterophilic graphs. Notably, most real-world homophilic and heterophilic graphs are comprised of a mixture of nodes in both homophilic and heterophilic structural patterns, exhibiting a structural disparity. However, the analysis of GNN performance with respect to nodes exhibiting different structural patterns, e.g., homophilic nodes in heterophilic graphs, remains rather limited. In the present study, we provide evidence that Graph Neural Networks(GNNs) on node classification typically perform admirably on homophilic nodes within homophilic graphs and heterophilic nodes within heterophilic graphs while struggling on the opposite node set, exhibiting a performance disparity. We theoretically and empirically identify effects of GNNs on testing nodes exhibiting distinct structural patterns. We then propose a rigorous, non-i.i.d PAC-Bayesian generalization bound for GNNs, revealing reasons for the performance disparity, namely the aggregated feature distance and homophily ratio difference between training and testing nodes. Furthermore, we demonstrate the practical implications of our new findings via (1) elucidating the effectiveness of deeper GNNs; and (2) revealing an over-looked distribution shift factor on graph out-of-distribution problem and proposing a new scenario accordingly.

Deep Learning/Graph Neural Networks

Divin Yan, Gengchen Wei, Chen Yang, Shengzhong Zhang, zengfeng Huang

This paper introduces a new approach to address the issue of class imbalance in graph neural networks (GNNs) for learning on graph-structured data. Our approach integrates imbalanced node classification and Bias-Variance Decomposition, establishing a theoretical framework that closely relates data imbalance to model variance. We also leverage graph augmentation technique to estimate the variance and design a regularization term to alleviate the impact of imbalance. Exhaustive tests are conducted on multiple benchmarks, including naturally imbalanced datasets and public-split class-imbalanced datasets, demonstrating that our approach outperforms state-of-the-art methods in various imbalanced scenarios. This work provides a novel theoretical perspective for addressing the problem of imbalanced node classification in GNNs.