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Probabilistic Methods · Monte Carlo and Sampling Methods

Tiange Liu, Nikola Surjanovic, Miguel Biron-Lattes, Alexandre Bouchard-Côté, Trevor Campbell

Many common Markov chain Monte Carlo (MCMC) kernels can be formulated using a deterministic involutive proposal with a step size parameter. Selecting an appropriate step size is often a challenging task in practice; and for complex multiscale targets, there may not be one choice of step size that works well globally. In this work, we address this problem with a novel class of involutive MCMC methods---AutoStep MCMC---that selects an appropriate step size at each iteration adapted to the local geometry of the target distribution. Weprove that under mild conditions AutoStep MCMC is $\pi$-invariant, irreducible, and aperiodic, and obtain bounds on expected energy jump distance and cost per iteration. Empirical results examine the robustness and efficacy of our proposed step size selection procedure, and show that AutoStep MCMC is competitive with state-of-the-art methods in terms of effective sample size per unit cost on a range of challenging target distributions.

Deep Learning · Generative Models and Autoencoders

Arwen Bradley, Preetum Nakkiran, David Berthelot, James Thornton, Joshua M Susskind

We study the theoretical foundations of composition in diffusion models, with a particular focus on out-of-distribution extrapolation and length-generalization. Prior work has shown that composing distributions via linear score combination can achieve promising results, including length-generalization in some cases (Du et al., 2023; Liu et al., 2022). However, our theoretical understanding of how and why such compositions work remains incomplete. In fact, it is not even entirely clear what it means for composition to "work". This paper starts to address these fundamental gaps. We begin by precisely defining one possible desired result of composition, which we call *projective composition*. Then, we investigate: (1) when linear score combinations provably achieve projective composition, (2) whether reverse-diffusion sampling can generate the desired composition, and (3) the conditions under which composition fails. We connect our theoretical analysis to prior empirical observations where composition has either worked or failed, for reasons that were unclear at the time. Finally, we propose a simple heuristic to help predict the success or failure of new compositions.

Social Aspects · Alignment

Tianyi Qiu, Zhonghao He, Tejasveer Chugh, Max Kleiman-Weiner

The training and deployment of large language models (LLMs) create a feedback loop with human users: models learn human beliefs from data, reinforce these beliefs with generated content, reabsorb the reinforced beliefs, and feed them back to users again and again. This dynamic resembles an echo chamber.We hypothesize that this feedback loop entrenches the existing values and beliefs of users, leading to a loss of diversity in human ideas and potentially the *lock-in* of false beliefs.We formalize this hypothesis and test it empirically with agent-based LLM simulations and real-world GPT usage data. Analysis reveals sudden but sustained drops in diversity after the release of new GPT iterations, consistent with the hypothesized human-AI feedback loop.*Website: https://thelockinhypothesis.com*

Deep Learning · Large Language Models

Yunzhen Feng, Ariel Kwiatkowski, Kunhao Zheng, Julia Kempe, Yaqi Duan

As large language models increasingly drive real-world applications, aligning them with human values becomes paramount. Reinforcement Learning from Human Feedback (RLHF) has emerged as a key technique, translating preference data into reward models when oracle human values remain inaccessible. In practice, RLHF mostly relies on approximate reward models, which may not consistently guide the policy toward maximizing the underlying human values. We propose Policy-Interpolated Learning for Aligned Feedback (PILAF), a novel response sampling strategy for preference labeling that explicitly aligns preference learning with maximizing the underlying oracle reward. PILAF is theoretically grounded, demonstrating optimality from both an optimization and a statistical perspective. The method is straightforward to implement and demonstrates strong performance in iterative and online RLHF settings where feedback curation is critical.

Applications · Computer Vision

Ang Cao, Sergio Arnaud, Oleksandr Maksymets, Jianing Yang, Ayush Jain, Ada Martin, Vincent-Pierre Berges, Paul McVay, Ruslan Partsey, Aravind Rajeswaran 等

3D vision-language grounding faces a fundamental data bottleneck: while 2D models train on billions of images, 3D models have access to only thousands of labeled scenes--a six-order-of-magnitude gap that severely limits performance. We introduce \textbf{\emph{LIFT-GS}}, a practical distillation technique that overcomes this limitation by using differentiable rendering to bridge 3D and 2D supervision. LIFT-GS predicts 3D Gaussian representations from point clouds and uses them to render predicted language-conditioned 3D masks into 2D views, enabling supervision from 2D foundation models (SAM, CLIP, LLaMA) without requiring any 3D annotations. This render-supervised formulation enables end-to-end training of complete encoder-decoder architectures and is inherently model-agnostic. LIFT-GS achieves state-of-the-art results with 25.7\% mAP on open-vocabulary instance segmentation (vs. 20.2\% prior SOTA) and consistent 10-30\% improvements on referential grounding tasks. Remarkably, pretraining effectively multiplies fine-tuning datasets by 2×, demonstrating strong scaling properties that suggest 3D VLG currently operates in a severely data-scarce regime. Project page: \url{https://liftgs.github.io}.

Applications · Computer Vision

Paul McVay, Sergio Arnaud, Ada Martin, Arjun Majumdar, Krishna Murthy Jatavallabhula, Phillip Thomas, Ruslan Partsey, Daniel Dugas, Abha Gejji, Alexander Sax 等

We present LOCATE 3D, a model for localizing objects in 3D scenes from referring expressions like "the small coffee table between the sofa and the lamp." LOCATE 3D sets a new state-of-the-art on standard referential grounding benchmarks and showcases robust generalization capabilities. Notably, LOCATE 3D operates directly on sensor observation streams (posed RGB-D frames), enabling real-world deployment on robots and AR devices. Key to our approach is 3D-JEPA, a novel self-supervised learning (SSL) algorithm applicable to sensor point clouds. It takes as input a 3D pointcloud featurized using 2D foundation models (CLIP, DINO). Subsequently, masked prediction in latent space is employed as a pretext task to aid the self-supervised learning of contextualized pointcloud features. Once trained, the 3D-JEPA encoder is finetuned alongside a language-conditioned decoder to jointly predict 3D masks and bounding boxes. Additionally, we introduce LOCATE 3D DATASET, a new dataset for 3D referential grounding, spanning multiple capture setups with over 130K annotations. This enables a systematic study of generalization capabilities as well as a stronger model. Code, models and dataset can be found at the project website: locate3d.atmeta.com

Applications · Chemistry, Physics, and Earth Sciences

Pengkang Guo, Bruno Correia, Pierre Vandergheynst, Daniel Probst

Machine learning for protein modeling faces significant challenges due to proteins' inherently dynamic nature, yet most graph-based machine learning methods rely solely on static structural information. Recently, the growing availability of molecular dynamics trajectories provides new opportunities for understanding the dynamic behavior of proteins; however, computational methods for utilizing this dynamic information remain limited. We propose a novel graph representation that integrates both static structural information and dynamic correlations from molecular dynamics trajectories, enabling more comprehensive modeling of proteins. By applying relational graph neural networks (RGNNs) to process this heterogeneous representation, we demonstrate significant improvements over structure-based approaches across three distinct tasks: atomic adaptability prediction, binding site detection, and binding affinity prediction. Our results validate that combining static and dynamic information provides complementary signals for understanding protein-ligand interactions, offering new possibilities for drug design and structural biology applications.

General Machine Learning · Causality

Yunxia Wang, Fuyuan CAO, Kui Yu, Jiye Liang

Federated causal structure learning aims to infer causal relationships from data stored on individual clients, with privacy concerns. Most existing methods assume identical variable sets across clients and present federated strategies for aggregating local updates. However, in practice, clients often observe overlapping but non-identical variable sets, and non-overlapping variables may introduce spurious dependencies. Moreover, existing strategies typically reflect only the overall quality of local graphs, ignoring the varying importance of relationships within each graph. In this paper, we study federated causal structure learning with non-identical variable sets, aiming to design an effective strategy for aggregating “correct” and “good” (non-)causal relationships across distributed datasets. Specifically, we first develop theories for detecting spurious dependencies, examining whether the learned relationships are “correct” or not. Furthermore, we define stable relationships as those that are both “correct” and “good” across multiple graphs, and finally design a two-level priority selection strategy for aggregating local updates, obtaining a global causal graph over the integrated variables. Experimental results on synthetic, benchmark and real-world data demonstrate the effectiveness of our method.

Optimization · Stochastic

Yuhan Ye, Ying Cui, Jingyi Wang

We propose an online adaptive sampling algorithm for solving stochastic nonsmooth difference-of-convex (DC) problems under time-varying distributions. At each iteration, the algorithm relies solely on data generated from the current distribution and employs distinct adaptive sampling rates for the convex and concave components of the DC function, a novel design guided by our theoretical analysis. We show that, under proper conditions on the convergence of distributions, the algorithm converges subsequentially to DC critical points almost surely. Furthermore, the sample size requirement of our proposed algorithm matches the results achieved in the smooth case or when a measurable subgradient selector is available, both under static distributions. A key element of this analysis is the derivation of a novel $O(\sqrt{p/n})$ pointwise convergence rate (modulo logarithmic factors) for the sample average approximation of subdifferential mappings, where $p$ is the dimension of the variable and $n$ is the sample size -- a result of independent interest. Numerical experiments confirm that the proposed algorithm is both efficient and effective for addressing stochastic nonsmooth problems.

General Machine Learning · Transfer, Multitask and Meta-learning

Benjamin Leblanc, Mathieu Bazinet, Nathaniel D'Amours, Alexandre Drouin, Pascal Germain

Both PAC-Bayesian and Sample Compress learning frameworks have been shown instrumental for deriving tight (non-vacuous) generalization bounds for neural networks. We leverage these results in a meta-learning scheme, relying on a hypernetwork that outputs the parameters of a downstream predictor from a dataset input. The originality of our approach lies in the investigated hypernetwork architectures that encode the dataset before decoding the parameters: (1) a PAC-Bayesian encoder that expresses a posterior distribution over a latent space, (2) a Sample Compress encoder that selects a small sample of the dataset input along with a message from a discrete set, and (3) a hybrid between both approaches motivated by a new Sample Compress theorem handling continuous messages. The latter theorem exploits the pivotal information transiting at the encoder-decoder junction in order to compute generalization guarantees for each downstream predictor obtained by our meta-learning scheme.

Theory · Reinforcement Learning and Planning

Audrey Huang, Adam Block, Qinghua Liu, Nan Jiang, Akshay Krishnamurthy, Dylan Foster

Recent work on inference-time alignment has established benefits of increasing inference-time computation in language models, but naively scaling compute through techniques like Best-of-N sampling can cause performance to degrade due to reward hacking. Toward a theoretical understanding of how to best leverage additional computation, we formalize inference-time alignment as improving a pre-trained policy’s responses for a prompt of interest, given access to an imperfect reward model. We analyze the performance of inference-time alignment algorithms in terms of (i) response quality, and (ii) compute, and provide new results that highlight the importance of the pre-trained policy’s coverage over high-quality responses for performance and compute scaling: (1) We show that Best-of-N alignment with an ideal N can achieve optimal performance under stringent notions of coverage, but provably suffers from reward hacking when N is large, and fails to achieve tight guarantees under more realistic coverage conditions; (2) We introduce InferenceTimePessimism, a new algorithm which mitigates reward hacking through deliberate use of inference-time compute, implementing pessimism in the face of uncertainty; we prove that its performance is optimal and scaling-monotonic, i.e., does ot degrade as N increases. We complement our theoretical results with experiments that demonstrate the practicality of our algorithm across a variety of tasks and models.

Applications · Computer Vision

Ayush Jain, Alexander Swerdlow, Yuzhou Wang, Sergio Arnaud, Ada Martin, Alexander Sax, Franziska Meier, Katerina Fragkiadaki

Progress in 3D vision-language learning has been hindered by the scarcity of large-scale 3D datasets. We introduce UniVLG, a unified architecture for 2D and 3D vision-language understanding that bridges the gap between existing 2D-centric models and the rich 3D sensory data available in embodied systems. Our approach initializes most model weights from pre-trained 2D models and trains on both 2D and 3D vision-language data. We propose a novel language-conditioned mask decoder shared across 2D and 3D modalities to ground objects effectively in both RGB and RGB-D images, outperforming box-based approaches. To further reduce the domain gap between 2D and 3D, we incorporate 2D-to-3D lifting strategies, enabling UniVLG to utilize 2D data to enhance 3D performance. With these innovations, our model achieves state-of-the-art performance across multiple 3D vision-language grounding tasks, demonstrating the potential of transferring advances from 2D vision-language learning to the data-constrained 3D domain. Furthermore, co-training on both 2D and 3D data enhances performance across modalities without sacrificing 2D capabilities. By removing the reliance on 3D mesh reconstruction and ground-truth object proposals, UniVLG sets a new standard for realistic, embodied-aligned evaluation. Code and additional visualizations are available at https://univlg.github.io.

Deep Learning · Large Language Models

Ning LU, Shengcai Liu, Jiahao Wu, Weiyu CHEN, Zhirui Zhang, Yew Soon ONG, Qi Wang, Ke Tang

Large language models (LLMs) have shown great potential as general-purpose AI assistants across various domains. To fully leverage this potential in specific applications, many companies provide fine-tuning API services, enabling users to upload their own data for LLM customization. However, fine-tuning services introduce a new safety threat: user-uploaded data, whether harmful or benign, can break the model’s alignment, leading to unsafe outputs. Moreover, existing defense methods struggle to address the diversity of fine-tuning datasets (e.g., varying sizes, tasks), often sacrificing utility for safety or vice versa. To address this issue, we propose Safe Delta, a safety-aware post-training defense method that adjusts the delta parameters (i.e., the parameter change before and after fine-tuning). Specifically, Safe Delta estimates the safety degradation, selects delta parameters to maximize utility while limiting overall safety loss, and applies a safety compensation vector to mitigate residual safety loss. Through extensive experiments on four diverse datasets with varying settings, our approach consistently preserves safety while ensuring that the utility gain from benign datasets remains unaffected.

Theory · Probabilistic Methods

Marvin Li, Aayush Karan, Sitan Chen

Large language models can exhibit unexpected behavior in the blink of an eye. In a recent computer use demo, a language model switched from coding to Googling pictures of Yellowstone, and these sudden shifts in behavior have also been observed in reasoning patterns and jailbreaks. This phenomenon is not unique to autoregressive models: in diffusion models, key features of the final output are decided in narrow ``critical windows'' of the generation process. In this work we develop a simple, unifying theory to explain this phenomenon. Using the formalism of stochastic localization for generative models, we show that it emerges generically as the generation process localizes to a sub-population of the distribution it models. While critical windows have been studied at length in diffusion models, existing theory heavily relies on strong distributional assumptions and the particulars of Gaussian diffusion. In contrast to existing work our theory (1) applies to autoregressive and diffusion models; (2) makes very few distributional assumptions; (3) quantitatively improves previous bounds even when specialized to diffusions; and (4) requires basic mathematical tools. Finally, we validate our predictions empirically for LLMs and find that critical windows often coincide with failures in problem solving for various math and reasoning benchmarks.

Applications · Chemistry, Physics, and Earth Sciences

Sanjeev Raja, Martin Šípka, Michael Psenka, Tobias Kreiman, Michal Pavelka, Aditi Krishnapriyan

Transition path sampling (TPS), which involves finding probable paths connecting two points on an energy landscape, remains a challenge due to the complexity of real-world atomistic systems. Current machine learning approaches rely on expensive training procedures and under-utilize growing quantities of atomistic data, limiting scalability and generalization. Generative models of atomistic conformational ensembles sample temporally independent states from energy landscapes, but their application to TPS remains mostly unexplored. In this work, we address TPS by interpreting candidate paths as trajectories sampled from stochastic dynamics induced by the learned score function of generative models, namely denoising diffusion and flow matching. Under these dynamics, finding high-likelihood transition paths becomes equivalent to minimizing the Onsager-Machlup (OM) action functional, enabling us to repurpose pre-trained generative models for TPS in a zero-shot fashion. We demonstrate our approach on a Müller-Brown potential and several fast-folding proteins, where we obtain diverse, physically realistic transition pathways, as well as tetrapeptides, where we demonstrate successful TPS on systems not seen by the generative model during training. Our method can be easily incorporated into new generative models, making it practically relevant as models continue to scale and improve.

Applications · Computer Vision

Zixuan Hu, Yichun Hu, Xiaotong Li, SHIXIANG TANG, LINGYU DUAN

Wild Test-Time Adaptation (WTTA) is proposed to adapt a source model to unseen domains under extreme data scarcity and multiple shifts. Previous approaches mainly focused on sample selection strategies, while overlooking the fundamental problem on underlying optimization. Initially, we critically analyze the widely-adopted entropy minimization framework in WTTA and uncover its significant limitations in noisy optimization dynamics that substantially hinder adaptation efficiency. Through our analysis, we identify region confidence as a superior alternative to traditional entropy, however, its direct optimization remains computationally prohibitive for real-time applications. In this paper, we introduce a novel region-integrated method **ReCAP** that bypasses the lengthy process. Specifically, we propose a probabilistic region modeling scheme that flexibly captures semantic changes in embedding space. Subsequently, we develop a finite-to-infinite asymptotic approximation that transforms the intractable region confidence into a tractable and upper-bounded proxy. These innovations significantly unlock the overlooked potential dynamics in local region in a concise solution. Our extensive experiments demonstrate the consistent superiority of ReCAP over existing methods across various datasets and wild scenarios. The source code will be available at https://github.com/hzcar/ReCAP.

General Machine Learning · Clustering

Yaowenhu, Wenxuan Tu, Yue Liu, Xinhang Wan, Junyi Yan, Taichun Zhou, Xinwang Liu

Deep graph clustering (DGC), which aims to unsupervisedly separate the nodes in an attribute graph into different clusters, has seen substantial potential in various industrial scenarios like community detection and recommendation. However, the real-world attribute graphs, e.g., social networks interactions, are usually large-scale and attribute-missing. To solve these two problems, we propose a novel DGC method termed **C**omplementary **M**ulti-**V**iew **N**eighborhood **D**ifferentiation ($\textit{CMV-ND}$), which preprocesses graph structural information into multiple views in a complete but non-redundant manner. First, to ensure completeness of the structural information, we propose a recursive neighborhood search that recursively explores the local structure of the graph by completely expanding node neighborhoods across different hop distances. Second, to eliminate the redundancy between neighborhoods at different hops, we introduce a neighborhood differential strategy that ensures no overlapping nodes between the differential hop representations. Then, we construct $K+1$ complementary views from the $K$ differential hop representations and the features of the target node. Last, we apply existing multi-view clustering or DGC methods to the views. Experimental results on six widely used graph datasets demonstrate that CMV-ND significantly improves the performance of various methods.

Social Aspects · Accountability, Transparency, and Interpretability

Yi Cai, Thibaud Ardoin, Gerhard Wunder

Feature attribution explains machine decisions by quantifying each feature's contribution.While numerous approaches rely on exact gradient measurements, recent work has adopted gradient estimation to derive explanatory information under query-level access, a restrictive yet more practical accessibility assumption known as the black-box setting.Following this direction, this paper introduces GEFA (Gradient-estimation-based Explanation For All), a general feature attribution framework leveraging proxy gradient estimation.Unlike the previous attempt that focused on explaining image classifiers, the proposed explainer derives feature attributions in a proxy space, making it generally applicable to arbitrary black-box models, regardless of input type.In addition to its close relationship with Integrated Gradients, our approach, a path method built upon estimated gradients, surprisingly produces unbiased estimates of Shapley Values.Compared to traditional sampling-based Shapley Value estimators, GEFA avoids potential information waste sourced from computing marginal contributions, thereby improving explanation quality, as demonstrated in quantitative evaluations across various settings.

Applications · Chemistry, Physics, and Earth Sciences

Xiang Fu, Brandon Wood, Luis Barroso-Luque, Daniel S. Levine, Meng Gao, Misko Dzamba, Larry Zitnick

Machine learning interatomic potentials (MLIPs) have become increasingly effective at approximating quantum mechanical calculations at a fraction of the computational cost. However, lower errors on held out test sets do not always translate to improved results on downstream physical property prediction tasks. In this paper, we propose testing MLIPs on their practical ability to conserve energy during molecular dynamic simulations. If passed, improved correlations are found between test errors and their performance on physical property prediction tasks. We identify choices which may lead to models failing this test, and use these observations to improve upon highly-expressive models. The resulting model, eSEN, provides state-of-the-art results on a range of physical property prediction tasks, including materials stability prediction, thermal conductivity prediction, and phonon calculations.

Social Aspects · Accountability, Transparency, and Interpretability

Lijie Hu, Chenyang Ren, Zhengyu Hu, Hongbin Lin, Chenglong Wang, Zhen Tan, Weimin Lyu, Jingfeng Zhang, Hui Xiong, Di Wang

Concept Bottleneck Models (CBMs) have garnered much attention for their ability to elucidate the prediction process through a human-understandable concept layer. However, most previous studies focused on cases where the data, including concepts, are clean. In many scenarios, we always need to remove/insert some training data or new concepts from trained CBMs due to different reasons, such as privacy concerns, data mislabelling, spurious concepts, and concept annotation errors. Thus, the challenge of deriving efficient editable CBMs without retraining from scratch persists, particularly in large-scale applications. To address these challenges, we propose Editable Concept Bottleneck Models (ECBMs). Specifically, ECBMs support three different levels of data removal: concept-label-level, concept-level, and data-level. ECBMs enjoy mathematically rigorous closed-form approximations derived from influence functions that obviate the need for re-training. Experimental results demonstrate the efficiency and effectiveness of our ECBMs, affirming their adaptability within the realm of CBMs.