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Applications · Health / Medicine

Alessandro Palma, Sergei Rybakov, Leon Hetzel, Stephan Günnemann, Fabian Theis

Latent space interpolations are a powerful tool for navigating deep generative models in applied settings. An example is single-cell RNA sequencing, where existing methods model cellular state transitions as latent space interpolations with variational autoencoders, often assuming linear shifts and Euclidean geometry. However, unless explicitly enforced, linear interpolations in the latent space may not correspond to geodesic paths on the data manifold, limiting methods that assume Euclidean geometry in the data representations. We introduce FlatVI, a novel training framework that regularises the latent manifold of discrete-likelihood variational autoencoders towards Euclidean geometry, specifically tailored for modelling single-cell count data. By encouraging straight lines in the latent space to approximate geodesic interpolations on the decoded single-cell manifold, FlatVI enhances compatibility with downstream approaches that assume Euclidean latent geometry. Experiments on synthetic data support the theoretical soundness of our approach, while applications to time-resolved single-cell RNA sequencing data demonstrate improved trajectory reconstruction and manifold interpolation.

General Machine Learning · Clustering

Steinar Laenen, Peter Macgregor, He Sun

In the kernel density estimation (KDE) problem, we are given a set $X$ of data points in $\mathbb{R}^d$, a kernel function $k: \mathbb{R}^d \times \mathbb{R}^d \rightarrow \mathbb{R}$, and a query point $\mathbf{q} \in \mathbb{R}^d$, and the objective is to quickly output an estimate of $\sum_{\mathbf{x} \in X} k(\mathbf{q}, \mathbf{x})$.In this paper, we consider $\textsf{KDE}$ in the dynamic setting, and introduce a data structure that efficiently maintains the _estimates_ for a set of query points as data points are added to $X$ over time.Based on this, we design a dynamic data structure that maintains a sparse approximation of the fully connected similarity graph on $X$, and develop a fast dynamic spectral clustering algorithm.We further evaluate the effectiveness of our algorithms on both synthetic and real-world datasets.

Applications

Yaoyang Liu, Junlin Li, Yinjun Wu, Zhen Chen

Although Multi-Vector Retrieval (MVR) has achieved the state of the art on many information retrieval (IR) tasks, its performance highly depends on how to decompose queries into smaller pieces, say phrases or tokens. However, optimizing query decomposition for MVR performance is not end-to-end differentiable. Even worse, jointly solving this problem and training the downstream retrieval-based systems, say RAG systems could be highly inefficient. To overcome these challenges, we propose Performance-Oriented Query Decomposer (POQD), a novel query decomposition framework for MVR. POQD leverages one LLM for query decomposition and searches the optimal prompt with an LLM-based optimizer. We further propose an end-to-end training algorithm to alternatively optimize the prompt for query decomposition and the downstream models. This algorithm can achieve superior MVR performance at a reasonable training cost as our theoretical analysis suggests. POQD can be integrated seamlessly into arbitrary retrieval-based systems such as Retrieval-Augmented Generation (RAG) systems. Extensive empirical studies on representative RAG-based QA tasks show that POQD outperforms existing query decomposition strategies in both retrieval performance and end-to-end QA accuracy. POQD is available at https://github.com/PKU-SDS-lab/POQD-ICML25.

Applications · Language, Speech and Dialog

Yinghao Li, Rithesh Kumar, Zeyu Jin

Diffusion models have demonstrated significant potential in speech synthesis tasks, including text-to-speech (TTS) and voice cloning. However, their iterative denoising processes are computationally intensive, and previous distillation attempts have shown consistent quality degradation. Moreover, existing TTS approaches are limited by non-differentiable components or iterative sampling that prevent true end-to-end optimization with perceptual metrics. We introduce DMOSpeech, a distilled diffusion-based TTS model that uniquely achieves both faster inference and superior performance compared to its teacher model. By enabling direct gradient pathways to all model components, we demonstrate the first successful end-to-end optimization of differentiable metrics in TTS, incorporating Connectionist Temporal Classification (CTC) loss and Speaker Verification (SV) loss. Our comprehensive experiments, validated through extensive human evaluation, show significant improvements in naturalness, intelligibility, and speaker similarity while reducing inference time by orders of magnitude. This work establishes a new framework for aligning speech synthesis with human auditory preferences through direct metric optimization. The audio samples are available at https://dmospeech.github.io/demo

Optimization

Youran Dong, Junfeng Yang, Wei Yao, Jin Zhang

Bilevel optimization is a powerful tool for many machine learning problems, such as hyperparameter optimization and meta-learning. Estimating hypergradients (also known as implicit gradients) is crucial for developing gradient-based methods for bilevel optimization. In this work, we propose a computationally efficient technique for incorporating curvature information into the approximation of hypergradients and present a novel algorithmic framework based on the resulting enhanced hypergradient computation. We provide convergence rate guarantees for the proposed framework in both deterministic and stochastic scenarios, particularly showing improved computational complexity over popular gradient-based methods in the deterministic setting. This improvement in complexity arises from a careful exploitation of the hypergradient structure and the inexact Newton method. In addition to the theoretical speedup, numerical experiments demonstrate the significant practical performance benefits of incorporating curvature information.

Applications · Computer Vision

Dong Xiao, Guangyao Chen, Peixi Peng, Yangru Huang, Yifan Zhao, Yongxing Dai, Yonghong Tian

Anomaly detection is essential for the safety and reliability of autonomous driving systems. Current methods often focus on detection accuracy but neglect response time, which is critical in time-sensitive driving scenarios. In this paper, we introduce real-time anomaly detection for autonomous driving, prioritizing both minimal response time and high accuracy. We propose a novel multimodal asynchronous hybrid network that combines event streams from event cameras with image data from RGB cameras. Our network utilizes the high temporal resolution of event cameras through an asynchronous Graph Neural Network and integrates it with spatial features extracted by a CNN from RGB images. This combination effectively captures both the temporal dynamics and spatial details of the driving environment, enabling swift and precise anomaly detection. Extensive experiments on benchmark datasets show that our approach outperforms existing methods in both accuracy and response time, achieving millisecond-level real-time performance.

Probabilistic Methods · Bayesian Models and Methods

Jacopo Talpini, Marco Savi, Giovanni Neglia

One-Shot Federated Learning (FL) is a recent paradigm that enables multiple clients to cooperatively learn a global model in a single round of communication with a central server. In this paper, we analyze the One-Shot FL problem through the lens of Bayesian inference and propose FedBEns, an algorithm that leverages the inherent multimodality of local loss functions to find better global models.Our algorithm leverages a mixture of Laplace approximations for the clients' local posteriors, which the server then aggregates to infer the global model. We conduct extensive experiments on various datasets, demonstrating that the proposed method outperforms competing baselines that typically rely on unimodal approximations of the local losses.

Reinforcement Learning

David Pfau, Ian Davies, Diana Borsa, João Madeira Araujo, Brendan Tracey, Hado van Hasselt

We introduce Wasserstein Policy Optimization (WPO), an actor-critic algorithm for reinforcement learning in continuous action spaces. WPO can be derived as an approximation to Wasserstein gradient flow over the space of all policies projected into a finite-dimensional parameter space (e.g., the weights of a neural network), leading to a simple and completely general closed-form update. The resulting algorithm combines many properties of deterministic and classic policy gradient methods. Like deterministic policy gradients, it exploits knowledge of the *gradient* of the action-value function with respect to the action. Like classic policy gradients, it can be applied to stochastic policies with arbitrary distributions over actions -- without using the reparameterization trick. We show results on the DeepMind Control Suite and a magnetic confinement fusion task which compare favorably with state-of-the-art continuous control methods.

Reinforcement Learning · Deep RL

Bryan L. M. de Oliveira, Luana G. B. Martins, Bruno Brandão, Murilo L. da Luz, Telma Woerle de Lima Soares, Luckeciano C. Melo

Effective visual representation learning is crucial for reinforcement learning (RL) agents to extract task-relevant information from raw sensory inputs and generalize across diverse environments. However, existing RL benchmarks lack the ability to systematically evaluate representation learning capabilities in isolation from other learning challenges. To address this gap, we introduce the Sliding Puzzles Gym (SPGym), a novel benchmark that transforms the classic 8-tile puzzle into a visual RL task with images drawn from arbitrarily large datasets. SPGym's key innovation lies in its ability to precisely control representation learning complexity through adjustable grid sizes and image pools, while maintaining fixed environment dynamics, observation, and action spaces. This design enables researchers to isolate and scale the visual representation challenge independently of other learning components. Through extensive experiments with model-free and model-based RL algorithms, we uncover fundamental limitations in current methods' ability to handle visual diversity. As we increase the pool of possible images, all algorithms exhibit in- and out-of-distribution performance degradation, with sophisticated representation learning techniques often underperforming simpler approaches like data augmentation. These findings highlight critical gaps in visual representation learning for RL and establish SPGym as a valuable tool for driving progress in robust, generalizable decision-making systems.

Applications · Chemistry, Physics, and Earth Sciences

David K Park, Xihaier Luo, Guang Zhao, Seungjun Lee, Miruna Oprescu, Shinjae Yoo

Spatiotemporal learning is challenging due to the intricate interplay between spatial and temporal dependencies, the high dimensionality of the data, and scalability constraints. These challenges are further amplified in scientific domains, where data is often irregularly distributed (e.g., missing values from sensor failures) and high-volume (e.g., high-fidelity simulations), posing additional computational and modeling difficulties. In this paper, we present SCENT, a novel framework for scalable and continuity-informed spatiotemporal representation learning. SCENT unifies interpolation, reconstruction, and forecasting within a single architecture. Built on a transformer-based encoder-processor-decoder backbone, SCENT introduces learnable queries to enhance generalization and a query-wise cross-attention mechanism to effectively capture multi-scale dependencies. To ensure scalability in both data size and model complexity, we incorporate a sparse attention mechanism, enabling flexible output representations and efficient evaluation at arbitrary resolutions. We validate SCENT through extensive simulations and real-world experiments, demonstrating state-of-the-art performance across multiple challenging tasks while achieving superior scalability.

General Machine Learning · Transfer, Multitask and Meta-learning

Wenju Sun, Qingyong Li, Yangliao Geng, Boyang Li

Multi-task model merging offers a promising paradigm for integrating multiple expert models into a unified system without additional training. Existing state-of-the-art techniques, such as Task Arithmetic and its variants, merge models by accumulating task vectors—defined as the parameter differences between pre-trained and fine-tuned models. However, task vector accumulation is often hindered by knowledge conflicts, where conflicting components across different task vectors can lead to performance degradation during the merging process. To address this challenge, we propose **Conflict-Aware Task Merging (CAT Merging)**, a novel training-free framework that selectively trims conflict-prone components from the task vectors. CAT Merging introduces several parameter-specific strategies, including projection for linear weights and masking for scaling and shifting parameters in normalization layers. Extensive experiments on vision and vision-language tasks demonstrate that CAT Merging effectively suppresses knowledge conflicts, achieving average accuracy improvements of up to 4.7% (ViT-B/32) and 2.0% (ViT-L/14) over state-of-the-art methods.

General Machine Learning · Representation Learning

Suchith Chidananda Prabhu, Bhavyajeet Singh, Anshul Mittal, Siddarth Asokan, Shikhar Mohan, Deepak Saini, Yashoteja Prabhu, Lakshya Kumar, Jian Jiao, Amit Singh 等

Retrieval-augmented classification and generation models benefit from *early-stage fusion* of high-quality text-based metadata, often called memory, but face high latency and noise sensitivity. In extreme classification (XC), where low latency is crucial, existing methods use *late-stage fusion* for efficiency and robustness. To enhance accuracy while maintaining low latency, we propose MOGIC, a novel approach to metadata-infused oracle guidance for XC. We train an early-fusion oracle classifier with access to both query-side and label-side ground-truth metadata in textual form and subsequently use it to guide existing memory-based XC disciple models via regularization. The MOGIC algorithm improves precision@1 and propensity-scored precision@1 of XC disciple models by 1-2% on six standard datasets, at no additional inference-time cost. We show that MOGIC can be used in a plug-and-play manner to enhance memory-free XC models such as NGAME or DEXA. Lastly, we demonstrate the robustness of the MOGIC algorithm to missing and noisy metadata. The code is publicly available at [https://github.com/suchith720/mogic](https://github.com/suchith720/mogic).

Position · Understanding

David A. Danhofer, Davide DAscenzo, Rafael Dubach, Tomaso A Poggio

Overparametrized Deep Neural Networks (DNNs) have demonstrated remarkable success in a wide variety of domains too high-dimensional for classical shallow networks subject to the curse of dimensionality. However, open questions about fundamental principles, that govern the learning dynamics of DNNs, remain. In this position paper we argue that it is the ability of DNNs to exploit the compositionally sparse structure of the target function driving their success. As such, DNNs can leverage the property that most practically relevant functions can be composed from a small set of constituent functions, each of which relies only on a low-dimensional subset of all inputs. We show that this property is shared by all efficiently Turing-computable functions and is therefore highly likely present in all current learning problems. While some promising theoretical insights on questions concerned with approximation and generalization exist in the setting of compositionally sparse functions, several important questions on the learnability and optimization of DNNs remain. Completing the picture of the role of compositional sparsity in deep learning is essential to a comprehensive theory of artificial—and even general—intelligence.

Optimization · Large Scale, Parallel and Distributed

Anh Duc Nguyen, Ilia Markov, Zhengqing Wu, Ali Ramezani-Kebrya, Kimon Antonakopoulos, Dan Alistarh, Volkan Cevher

Modern deep neural networks exhibit heterogeneity across numerous layers of various types such as residuals, multi-head attention, etc., due to varying structures (dimensions, activation functions, etc.), distinct representation characteristics, which impact predictions. We develop a general layer-wise quantization framework with tight variance and code-length bounds, adapting to the heterogeneities over the course of training. We then apply a new layer-wise quantization technique within distributed variational inequalities (VIs), proposing a novel Quantized Optimistic Dual Averaging (QODA) algorithm with adaptive learning rates, which achieves competitive convergence rates for monotone VIs. We empirically show that QODA achieves up to a $150$% speedup over the baselines in end-to-end training time for training Wasserstein GAN on $12+$ GPUs.

Deep Learning · Algorithms

Thomas Pethick, Wanyun Xie, Kimon Antonakopoulos, Zhenyu Zhu, Antonio Silveti-Falls, Volkan Cevher

In this work, we study optimization methods that leverage the linear minimization oracle (LMO) over a norm-ball. We propose a new stochastic family of algorithms that uses the LMO to adapt to the geometry of the problem and, perhaps surprisingly, show that they can be applied to unconstrained problems. The resulting update rule unifies several existing optimization methods under a single framework. Furthermore, we propose an explicit choice of norm for deep architectures, which, as a side benefit, leads to the transferability of hyperparameters across model sizes. Experimentally, we demonstrate significant speedups on nanoGPT training without any reliance on Adam. The proposed method is memory-efficient, requiring only one set of model weights and one set of gradients, which can be stored in half-precision.

Deep Learning · Large Language Models

Aniket Vashishtha, Abhinav Kumar, Atharva Pandey, Abbavaram Gowtham Reddy, Kabir Ahuja, Vineeth N Balasubramanian, Amit Sharma

For text-based AI systems to interact in the real world, causal reasoning is an essential skill. Since interventional data is costly to generate, we study to what extent an agent can learn causal reasoning from passive data. Specifically, we consider an axiomatic training setup where an agent learns from multiple demonstrations of a causal axiom (or rule), rather than incorporating the axiom as an inductive bias or inferring it from data values. A key question is whether the agent would learn to generalize from the axiom demonstrations to new scenarios. For example, if a transformer model is trained on demonstrations of the causal transitivity axiom over small graphs, would it generalize to applying the transitivity axiom over large graphs? Our results, based on a novel axiomatic training scheme, indicate that such generalization is possible. We consider the task of inferring whether a variable causes another variable, given a causal graph structure. We find that a 67 million parameter transformer model, when trained on linear causal chains (along with some noisy variations) can generalize well to new kinds of graphs, including longer causal chains, causal chains with reversed order, and graphs with branching; even when it is not explicitly trained for such settings. Our model performs at par (or even better) than many larger language models such as GPT-4, Gemini Pro, and Phi-3. Overall, our axiomatic training framework provides a new paradigm of learning causal reasoning from passive data that can be used to learn arbitrary axioms, as long as sufficient demonstrations can be generated.

Theory · Deep Learning

Leyan Pan, Vijay Ganesh, Jacob Abernethy, Chris Esposo, Wenke Lee

We formally study the logical reasoning capabilities of decoder-only Transformers in the context of the boolean satisfiability (SAT) problem. First, we prove by construction that decoder-only Transformers can decide 3-SAT, in a non-uniform model of computation, using backtracking and deduction via Chain-of-Thought (CoT).Second, we implement our construction as a PyTorch model with a tool (PARAT) that we designed to empirically demonstrate its correctness and investigate its properties.Third, rather than \textit{programming} a transformer to reason, we evaluate empirically whether it can be \textit{trained} to do so by learning directly from algorithmic traces (``reasoning paths'') from our theoretical construction. The trained models demonstrate strong out-of-distribution generalization on problem sizes seen during training but has limited length generalization, which is consistent with the implications of our theoretical result.

Deep Learning · Sequential Models, Time series

Vincent Herrmann, Róbert Csordás, Jürgen Schmidhuber

Detecting when a neural sequence model does "interesting" computation is an open problem. The next token prediction loss is a poor indicator: Low loss can stem from trivially predictable sequences that are uninteresting, while high loss may reflect unpredictable but also irrelevant information that can be ignored by the model. We propose a better metric: measuring the model's ability to predict its own future hidden states. We show empirically that this metric–in contrast to the next token prediction loss–correlates with the intuitive interestingness of the task. To measure predictability, we introduce the architecture-agnostic "prediction of hidden states" (PHi) layer that serves as an information bottleneck on the main pathway of the network (e.g., the residual stream in Transformers). We propose a novel learned predictive prior that enables us to measure the novel information gained in each computation step, which serves as our metric. We show empirically that our metric predicts the description length of formal languages learned in-context, the complexity of mathematical reasoning problems, and the correctness of self-generated reasoning chains.

Deep Learning · Theory

Mason Kamb, Surya Ganguli

We obtain an analytic, interpretable and predictive theory of creativity in convolutional diffusion models. Indeed, score-matching diffusion models can generate highly original images that lie far from their training data. However, optimal score-matching theory suggests that these models should only be able to produce memorized training examples. To reconcile this theory-experiment gap, we identify two simple inductive biases, locality and equivariance, that: (1) induce a form of combinatorial creativity by preventing optimal score-matching; (2) result in fully analytic, completely mechanistically interpretable, local score (LS) and equivariant local score (ELS) machines that, (3) after calibrating a single time-dependent hyperparameter can quantitatively predict the outputs of trained convolution only diffusion models (like ResNets and UNets) with high accuracy (median $r^2$ of $0.95, 0.94, 0.94, 0.96$ for our top model on CIFAR10, FashionMNIST, MNIST, and CelebA). Our model reveals a {\it locally consistent patch mosaic} mechanism of creativity, in which diffusion models create exponentially many novel images by mixing and matching different local training set patches at different scales and image locations. Our theory also partially predicts the outputs of pre-trained self-attention enabled UNets (median $r^2 \sim 0.77$ on CIFAR10), revealing an intriguing role for attention in carving out semantic coherence from local patch mosaics.

Deep Learning · Large Language Models

Dang Nguyen, Zeman Li, MohammadHossein Bateni, Vahab Mirrokni, Meisam Razaviyayn, Baharan Mirzasoleiman

Synthetic data has the potential to improve the performance, training efficiency, and privacy of real training examples. Nevertheless, existing approaches for synthetic text generation are mostly heuristics and cannot generate human-readable text without compromising the privacy of real data, or provide performance guarantees for training Large Language Models (LLMs). In this work, we propose the first theoretically rigorous approach for generating synthetic human-readable text that provides convergence, performance, and privacy guarantees for fine-tuning LLMs on a target task. To do so, we leverage Alternating Direction Method of Multipliers (ADMM) that iteratively optimizes the embeddings of synthetic examples to match the noisy gradient of the target training or validation data, and maps them to a sequence of text tokens with low perplexity. In doing so, the generated synthetic text guarantees convergence of the model to a close neighborhood of the solution obtained by fine-tuning on real data and preserves their privacy. Experiments on various classification tasks confirm the effectiveness of our proposed approach. Our code is available at [https://github.com/BigML-CS-UCLA/GRADMM](https://github.com/BigML-CS-UCLA/GRADMM).