The representation learning of time series has a wide range of downstream tasks and applications in many practical scenarios. However, due to the complexity, spatiotemporality, and continuity of sequential stream data, compared with the representation learning of structural data such as images/videos, the time series self-supervised representation learning is even more challenging. Besides, the direct application of existing contrastive learning and masked autoencoder based approaches to time series representation learning encounters inherent theoretical limitations, such as ineffective augmentation and masking strategies. To this end, we propose a Language Pre-training guided Masking Representation Learning (LPMRL) for times series classification. Specifically, we first propose a novel language pre-training guided masking encoder for adaptively sampling semantic spatiotemporal patches via natural language descriptions and improving the discriminability of latent representations. Furthermore, we present the dual-information contrastive learning mechanism to explore both local and global information by meticulously designing high-quality hard negative samples of time series data samples. As a result, we also design various experiments, such as visualization of masking position and distribution and reconstruction error to verify the reasonability of proposed language guided masking technique. Last, we evaluate the performance of proposed representation learning via classification task conducted on 106 time series datasets, which demonstrates the effectiveness of proposed method.
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Adversarial Contrastive Graph Masked AutoEncoder Against Graph Structure and Feature Dual Attacks
PDF ↗Graph Neural Networks (GNNs) have been shown vulnerable to graph adversarial attacks. Current robust graph representation learning methods mainly defend against graph structure attack, and improves performance of GNNs. However node feature in graph can been easily attacked in reality. The joint defense on graph structure and feature dual attacks remains challenging yet less studied. To fulfill this gap, we propose Adversarial Contrastive Graph Masked AutoEncoder (ACGMAE) to defend against graph structure and feature dual attacks. ACGMAE employs adversarial feature masking for reconstructing node feature to mitigate the influence of feature attack. ACGMAE employs contrastive learning on kNN graph and attacked graph, considers neighbor nodes as positive samples, and further calculates their probabilities being true positive to mitigate the effect of adversarial edges. Extensive experiments on node classification and clustering demonstrate the effectiveness of the proposed ACGMAE especially under graph structure and feature dual attacks.
An issue concerning the use of deep reinforcement learning (RL) agents is whether they can be trusted to perform reliably when deployed, as training environments may not reflect real-life environments. Anticipating instances outside their training scope, learning-enabled systems are often equipped with out-of-distribution (OOD) detectors that alert when a trained system encounters a state it does not recognize or in which it exhibits uncertainty. There exists limited work conducted on the problem of OOD detection within RL, with prior studies being unable to achieve a consensus on the definition of OOD execution within the context of RL. By framing our problem using a Markov Decision Process, we assume there is a transition distribution mapping each state-action pair to another state with some probability. Based on this, we consider the following definition of OOD execution within RL: A transition is OOD if its probability during real-life deployment differs from the transition distribution encountered during training. As such, we utilize conditional variational autoencoders (CVAE) to approximate the transition dynamics of the training environment and implement a conformity-based detector using reconstruction loss that is able to guarantee OOD detection with a pre-determined confidence level. We evaluate our detector by adapting existing benchmarks and compare it with existing OOD detection models for RL.
A Lottery Ticket Hypothesis Approach with Sparse Fine-tuning and MAE for Image Forgery Detection and Localization
PDF ↗The rise in sophisticated image forgery techniques, driven by advancements in image editing and generation, has posed new security challenges. Traditional methods, designed for specific tampering artifacts, struggle with out-of-distribution image forgery detection. In this paper, we propose a shift in paradigm, placing greater emphasis on the universal characteristics of authentic images, as opposed to solely focusing on specific forgery signals. We introduce an enhancement to the Masked Autoencoder (MAE), aptly termed the Forgery MAE (FMAE). This modification retains the inherent characteristics of natural images while integrating multi-source forgery information. Our implementation involves applying the lottery ticket hypothesis during pre-training to identify forgery-sensitive parameters, followed by their sparse fine-tuning to target the forgery detection and localization task. Concurrently, we develop a ``mixture of experts'' noise extractor to compile multi-source forgery data. Our FMAE effectively extracts forgery features and shows strong resilience against unseen forgeries. Extensive experiments across multiple datasets confirm our method's superior accuracy and generalization capability over existing techniques.
Robust Image Hashing Based on Contrastive Masked Autoencoder with Weak-Strong Augmentation Alignment
PDF ↗Recently, numerous robust image hashing schemes have been developed for content identification. However, many of these schemes face the challenges of maintaining discrimination while simultaneously resisting large-scale attacks. In this paper, we propose a robust image hashing scheme based on Contrastive Masked Autoencoder with weak-strong augmentation Alignment (CMAA). Leveraging contrastive learning, CMAA is designed to learn features that are robust to large-scale and hybrid attacks while maintaining the discrimination of those features. Specifically, it utilizes distribution divergence to align weak attack augmented features with strong attack augmented features, namely weak-strong augmentation alignment, to enhance the robustness to strong attacks. In addition, a masked vision transformer is incorporated to further enhance content identification performance. CMAA also includes a parameter-free quantization layer to mitigate the loss induced by binarization. Experimental results demonstrate that our method exhibits remarkable robustness against various attacks, including challenging ones such as rotation and hybrid attacks, and delivers excellent identification performance with a F1 score close to 1.0. Our code and supplementary materials are available on Github.
SSC-VAE: Structured Sparse Coding Based Variational Autoencoder for Detail Preserved Image Reconstruction
PDF ↗Discrete latent representation techniques, such as Vector Quantization (VQ) and Sparse Coding (SC), have demonstrated superior image reconstruction and generation quality compared to continuous representation methods in Variational Autoencoders (VAEs). However, existing approaches often treat the latent representations of an image independently in their discrete representation space, neglecting both the inherent structural information within each representation and the correlations among them. This oversight leads to coarse representations and suboptimal generated results. In this paper, we address these limitations by introducing correlations among and within the latent representations of individual images in the latent discrete space of VAEs using sparse coding. We impose two-dimensional structural information through adaptive thresholding, enhancing local structure in image representations while suppressing noise via parsimonious representation with a learned dictionary. Empirical studies on three real benchmark datasets, including a clinical Ultrasound dataset, BSDS500, and mini-Imagenet, demonstrate that our proposed model preserves fine-grained details in image reconstruction and significantly outperforms baseline models of SC-VAE and VQ-VAE across objective and subjective image quality metrics. Particularly noteworthy are the substantial performance improvements observed on the ultrasound dataset, where structure information is crucial. Specifically, we observe significant performance improvements of 7.68 % and 17.03 % in SSIM, 3.25 dB and 6.58 dB in PSNR, 0.15 and 0.24 in LPIPS, 45.38 and 84.05 in FID over SC-VAE and VQ-VAE, respectively, indicating the superiority of our method in terms of image reconstruction quality and fidelity.
RI-MAE: Rotation-Invariant Masked AutoEncoders for Self-Supervised Point Cloud Representation Learning
PDF ↗Masked point modeling methods have recently achieved great success in self-supervised learning for point cloud data. However, these methods are sensitive to rotations and often exhibit sharp performance drops when encountering rotational variations. In this paper, we propose a novel Rotation-Invariant Masked AutoEncoders (RI-MAE) to address two major challenges: 1) achieving rotation-invariant latent representations, and 2) facilitating self-supervised reconstruction in a rotation-invariant manner. For the first challenge, we introduce RI-Transformer, which features disentangled geometry content, rotation-invariant relative orientation and position embedding mechanisms for constructing rotation-invariant point cloud latent space. For the second challenge, a novel dual-branch student-teacher architecture is devised. It enables the self-supervised learning via the reconstruction of masked patches within the learned rotation-invariant latent space. Each branch is based on an RI-Transformer, and they are connected with an additional RI-Transformer predictor. The teacher encodes all point patches, while the student solely encodes unmasked ones. Finally, the predictor predicts the latent features of the masked patches using the output latent embeddings from the student, supervised by the outputs from the teacher. Extensive experiments demonstrate that our method is robust to rotations, achieving the state-of-the-art performance on various downstream tasks.
DreamUHD: Frequency Enhanced Variational Autoencoder for Ultra-High-Definition Image Restoration
PDF ↗Existing ultra-high-definition (UHD) image restoration methods often struggle with consistency due to downsampling. We aim to address these challenges by leveraging the powerful latent space representation and reconstruction capabilities of Variational Autoencoders (VAE). However, applying VAE to UHD image restoration presents challenges: 1) High-performing VAEs have large parameter sizes, leading to significant carbon footprints; 2) The self-reconstruction property of VAE hinders bridging the domain gap between clean and degraded images; 3) Latent encoding in VAE can lose high-frequency information, compromising image detail. To overcome these challenges, we propose a frequency enhanced VAE UHD image restoration framework by integrating frequency priors. First, we design the Fourier-based lightweight frequency learning within the VAE to improve parameter efficiency. Then, we introduce a wavelet-based adapter that extracts multi-scale image information and employs frequency-aware adaptive modulation to bridge the domain gap by integrating degraded image data into the pre-trained VAE. Additionally, the adapter injects high-frequency information into the VAE decoder, enhancing detail in the restored images. In this way, our method effectively combines the powerful latent space representation with frequency priors to enhance UHD image restoration. Extensive experiments on various UHD image restoration tasks show that our method surpasses state-of-the-art methods both qualitatively and quantitatively.
Deep Hierarchies and Invariant Disease-Indicative Feature Learning for Computer Aided Diagnosis of Multiple Fundus Diseases
PDF ↗With the advancement of computer vision, numerous models have been proposed for screening of fundus diseases. However, the recognition of multiple fundus diseases is often hampered by the simultaneous presence of multiple disease types and the confluence of lesion types in fundus images. This paper addresses these challenges by conceptualizing them as multi-level feature fusion and self-supervised disease-indicative feature learning problems. We decode fundus images at various levels of granularity to delineate scenarios wherein multiple diseases and lesions co-occur. To effectively integrate these features, we introduce a hierarchical vision transformer (HVT) that adeptly captures both inter-level and intra-level dependencies. A novel forward-attention module is proposed to enhance the integration of lower-level semantic information into higher semantic layers, thereby enriching the representation of complex features. Additionally, we introduce a novel self-supervised mask-consistent feature learner (MCFL). Unlike traditional mask-autoencoders that reconstruct original images using encoder-decoder structures, MCFL utilizes a teacher-student framework to reconstruct mask-consistent feature maps. In this setup, exponential moving averaging is employed to derive classification-guided features, serving as labels for reconstruction rather than merely reconstructing the original images. This innovative approach facilitates the extraction of disease-indicative features. Extensive experiments demonstrate that our method significantly outperforms existing state-of-the-art models.
Masked autoencoder (MAE) shows that severe augmentation during training produces robust representations for high-level tasks. This paper brings the MAE-like framework to nighttime image enhancement, demonstrating that severe augmentation during training produces strong network priors that are resilient to real-world night haze degradations. We propose a novel nighttime image dehazing method with self-prior learning. Our main novelty lies in the design of severe augmentation, which allows our model to learn robust priors. Unlike MAE that uses masking, we leverage two key challenging factors of nighttime images as augmentation: light effects and noise. During training, we intentionally degrade clear images by blending them with light effects as well as by adding noise, and subsequently restore the clear images. This enables our model to learn clear background priors. By increasing the noise values to approach as high as the pixel intensity values of the glow and light effect blended images, our augmentation becomes severe, resulting in stronger priors. While our self-prior learning is considerably effective in suppressing glow and revealing details of background scenes, in some cases, there are still some undesired artifacts that remain, particularly in the forms of over-suppression. To address these artifacts, we propose a self-refinement module based on the semi-supervised teacher-student framework. Our NightHaze, especially our MAE-like self-prior learning, shows that models trained with severe augmentation effectively improve the visibility of input haze images, approaching the clarity of clear nighttime images. Extensive experiments demonstrate that our NightHaze achieves state-of-the-art performance, outperforming existing nighttime image dehazing methods by a substantial margin of 15.5% for MUSIQ and 23.5% for ClipIQA.
3D semantic scene completion is critical for multiple downstream tasks in autonomous systems. It estimates missing geometric and semantic information in the acquired scene data. Due to the challenging real-world conditions, this task usually demands complex models that process multi-modal data to achieve acceptable performance. We propose a unique neural model, leveraging advances from the state space and diffusion generative modeling to achieve remarkable 3D semantic scene completion performance with monocular image input. Our technique processes the data in the conditioned latent space of a variational autoencoder where diffusion modeling is carried out with an innovative state space technique. A key component of our neural network is the proposed Skimba (Skip Mamba) denoiser, which is adept at efficiently processing long-sequence data. The Skimba diffusion model is integral to our 3D scene completion network, incorporating a triple Mamba structure, dimensional decomposition residuals and varying dilations along three directions. We also adopt a variant of this network for the subsequent semantic segmentation stage of our method. Extensive evaluation on the standard SemanticKITTI and SSCBench-KITTI360 datasets show that our approach not only outperforms other monocular techniques by a large margin, it also achieves competitive performance against stereo methods.
Most existing 3D visual speech animation methods synthesize lip movements synchronized with speech, which however neglect head poses and therefore degrade the animation realism. The animation of head poses presents two primary challenges: (1) the intricate mapping between speech and head poses remains poorly understood and (2) the absence of 4D face datasets featuring realistic head poses. Inspired by prosody decomposition in speech processing, we discern that head movements correlate with the fundamental frequency (F0) of speech prosody, while lip movements align with the language content. These observations motivate us to propose a novel framework, dubbed ProsodyTalker, that concurrently synthesizes lip and head movements, grounded in the principles of prosody decomposition. The core idea is first to adopt information perturbation to explicitly decompose the speech prosody into pose-related F0 and lip-related language content. Then, an autoregressive content-oriented fusion decoder is employed to enhance lip synchronization in the synthesized facial sequences. To synthesize head poses, we design a transformer-based variational autoencoder to learn a latent distribution of facial sequences and propose an F0-conditioned latent diffusion model to establish a probabilistic mapping from F0 to pose-related latent codes. Furthermore, we contribute a large-scale 4D face dataset containing bunches of variations in identities, head poses and facial motions. Extensive experiments show that our method achieves more realistic animation than state-of-the-art methods.
Subcellular structure segmentation is a fundamental task in biological imaging. Existing self-supervised representation learning combined with classical k-means clustering achieved unsupervised image segmentation, but it was constrained by time-consuming test-time pixel-wise feature extraction and clustering synchronization. This study introduces SCCS, a lightweight graph neural network-based spectral clustering framework for end-to-end subcellular structure segmentation upon superpixel graphs, greatly relieving the computational complexity in test-time numerical spectral clustering and inter-graph label inconsistency. Specifically, SCCS exploits the self-supervised masked autoencoder for representation learning and the construction of superpixel graphs (spG). Unlike per-graph scalar affinity-based spectral clustering, the proposed SCCS parameterizes the mapping from learned deep spG representations to coordinates in the spectral embedding space and the clustering assignments. The SCCS is optimized under unsupervised eigendecomposition and incremental clustering criteria, which synchronize the intra- and inter-graph spectral clustering. The proposed approach is evaluated on a publicly available volumetric electron microscopy dataset. Experiments demonstrate the effectiveness and performance gains of the proposed SCCS over the state-of-the-art in discovering a variety of subcellular structures.
Text-driven Human-Object Interaction (Text-to-HOI) generation is an emerging field with applications in animation, video games, virtual reality, and robotics. A key challenge in HOI generation is maintaining interaction consistency in long sequences. Existing Text-to-Motion-based approaches, such as discrete motion tokenization, cannot be directly applied to HOI generation due to limited data in this domain and the complexity of the modality. To address the problem of interaction consistency in long sequences, we propose an autoregressive diffusion model (ARDHOI) that predicts the next continuous token. Specifically, we introduce a Contrastive Variational Autoencoder (cVAE) to learn a physically plausible space of continuous HOI tokens, thereby ensuring that generated human-object motions are realistic and natural. For generating sequences autoregressively, we develop a Mamba-based context encoder to capture and maintain consistent sequential actions. Additionally, we implement an MLP-based denoiser to generate the subsequent token conditioned on the encoded context. Our model has been evaluated on the OMOMO and BEHAVE datasets, where it outperforms existing state-of-the-art methods in terms of both performance and inference speed. This makes ARDHOI a robust and efficient solution for text-driven HOI tasks.
Neural video compression has recently demonstrated significant potential to compete with conventional video codecs in terms of rate-quality performance. These learned video codecs are however associated with various issues related to decoding complexity (for autoencoder-based methods) and/or system delays (for implicit neural representation (INR) based models), which currently prevent them from being deployed in practical applications. In this paper, targeting a practical neural video codec, we propose a novel INR-based coding framework, PNVC, which innovatively combines autoencoder-based and overfitted solutions. Our approach benefits from several design innovations, including a new structural reparameterization-based architecture, hierarchical quality control, modulation-based entropy modeling, and scale-aware positional embedding. Supporting both low delay (LD) and random access (RA) configurations, PNVC outperforms existing INR-based codecs, achieving nearly 35%+ BD-rate savings against HEVC HM 18.0 (LD) - almost 10% more compared to one of the state-of-the-art INR-based codecs, HiNeRV and 5% more over VTM 20.0 (LD), while maintaining 20+ FPS decoding speeds for 1080p content. This represents an important step forward for INR-based video coding, moving it towards practical deployment.
Adaptive Siamese Masked Autoencoder with Global Optimization for Unsupervised Point Cloud Shape Correspondence
PDF ↗Unsupervised point cloud shape correspondence aims to establish point-wise correspondences between point clouds without annotated data. Ensuring efficiency and accuracy is crucial for practically implementing point cloud shape correspondence. Although the current methods have achieved desirable performance, the nature of encoding at dense points limits their application in actual scenarios. Moreover, independently computing per-point correspondences results in numerous multiple-to-one erroneous correspondences. To address these issues, we present an Adaptive siamese Masked autoencoder with Global Optimization (AMIGO), comprising a siamese masked autoencoder and a global optimization module. In the siamese masked autoencoder, we downsample the input point cloud and employ adaptive siamese mask operations to boost the coding capabilities of the encoder, thereby mitigating the information loss caused by downsampling. In the global optimization module, optimal transport is only utilized to generate pseudo-labels during the training phase, facilitating the efficient global planning of the correspondence results. Extensive experiments on four standard human and animal benchmarks demonstrate that AMIGO surpasses existing methods with remarkable margins, achieving new state-of-the-art results.
Elucidating the functional mechanisms of the primary visual cortex (V1) remains a fundamental challenge in systems neuroscience. Current computational models face two critical limitations, namely the challenge of cross-modal integration between partial neural recordings and complex visual stimuli, and the inherent variability in neural characteristics across individuals, including differences in neuron populations and firing patterns. To address these challenges, we present a multi-modal identifiable variational autoencoder (miVAE) that employs a two-level disentanglement strategy to map neural activity and visual stimuli into a unified latent space. This framework enables robust identification of cross-modal correlations through refined latent space modeling. We complement this with a novel score-based attribution analysis that traces latent variables back to their origins in the source data space. Evaluation on a large-scale mouse V1 dataset demonstrates that our method achieves state-of-the-art performance in cross-individual latent representation and alignment, without requiring subject-specific fine-tuning, and exhibits improved performance with increasing data size. Significantly, our attribution algorithm successfully identifies distinct neuronal subpopulations characterized by unique temporal patterns and stimulus discrimination properties, while simultaneously revealing stimulus regions that show specific sensitivity to edge features and luminance variations. This scalable framework offers promising applications not only for advancing V1 research but also for broader investigations in neuroscience.
Spatially Resolved Transcriptomics (SRT) has become an indispensable tool in various fields, including tumor microenvironment identification, neurobiology, and the study of complex tissue architecture. However, the accuracy of these insights is often compromised by noise in spatial transcriptomics data due to technical limitations. While recent advancements in denoising methods have shown some promise, they frequently fall short by neglecting spatial features, overlooking the variability in noise levels among genes, and relying heavily on external histological images for supplementary information. In our study, we propose DUSTED, a Dual-Attention Enhanced Spatial Transcriptomics Denoiser, designed to address these challenges. Built on a graph autoencoder framework, DUSTED utilizes gene channel attention and graph attention mechanisms to simultaneously consider spatial features and noise variability in gene expression data. Additionally, it integrates the negative binomial distribution with or without zero-inflation, ensuring a more accurate fit for gene expression distributions. Benchmark tests using simulated datasets demonstrate that DUSTED outperforms existing methods. Furthermore, in real-world applications with the HOCWTA and DLPFC datasets, DUSTED excels in enhancing the correlation between gene and protein expression, recovering spatial gene expression patterns, and improving clustering results. These improvements underscore its potential impact on advancing our understanding of tumor microenvironments, neural tissue organization, and other biologically significant areas.
Deep learning has been widely applied to various aspects of computer vision, but the emergence of adversarial attacks raises concerns about its reliability. Adversarial training (AT) is one of the most effective defense methods, which incorporates adversarial examples into the training data. However, AT is typically employed in a discriminative learning manner, i.e., learning the mapping (conditional probability) from samples to labels, it essentially reinforces this mapping without considering the underlying data distribution. It is notable that adversarial examples often deviate from the distribution of normal (clean) samples. Therefore, building upon existing adversarial defense schemes, we propose to further exploit the distribution of normal samples, partly from the generative learning perspective, resulting in a novel robustness enhancement paradigm. We train a simple autoencoder (AE) autoregressively on normal samples to learn their prior distribution, effectively serving as an image manifold. This AE is then used as a manifold projection operator to incorporate the distribution information of normal samples. Specifically, we organically integrate the pretrained AE into the training process of both AT and adversarial distillation (AD), a method aiming at improving the robustness of small models with low capacity. Since the AE captures the distribution of normal samples, it can adaptively pull adversarial examples closer to the normal sample manifold, weakening the attack strength of adversarial samples and easing the learning of mappings from adversarial samples to correct labels. From the Pearson correlation coefficient (PCC) between the statistics on normal and adversarial examples, it’s validated that the AE indeed pulls adversarial samples closer to normal samples. Extensive experiments illustrate that our proposed adversarial defense paradigm significantly improves the robustness compared with previous state-of-the-art AT and AD methods.
Advances in robotic control and sensing have propelled the rise of automated scientific laboratories capable of high-throughput experiments. However, automated scientific laboratories are currently limited by human intuition in their ability to efficiently design and interpret experiments in high-dimensional spaces, throttling scientific discovery. We present AutoSciLab, a machine learning framework for driving autonomous scientific experiments, forming a surrogate researcher purposed for scientific discovery in high-dimensional spaces. AutoSciLab autonomously follows the scientific method in four steps: (i) generating high-dimensional experiments (x) using a variational autoencoder (ii) selecting optimal experiments by forming hypotheses using active learning (iii) distilling the experimental results to discover relevant low-dimensional latent variables (z) with a ‘directional autoencoder’ and (iv) learning a human interpretable equation connecting the discovered latent variables with a quantity of interest (y = f (z)), using a neural network equation learner. We validate the generalizability of AutoSciLab by rediscovering a) the principles of projectile motion and b) the phase-transitions within the spin-states of the Ising model (NP-hard problem). Applying our framework to an open-ended nanophotonics problem, AutoSciLab discovers a new way to steer incoherent light emission beyond current state-of-the-art, defining a new structure(material)-property(light-emission) relationship governing the physical process using closed-loop noisy experimental feedback.