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Applications · Neuroscience, Cognitive Science

Xu Zhang, Ruijie Quan, Wenguan Wang, Yi Yang

Reconstructing visual stimuli from fMRI signals is a central challenge bridging machine learning and neuroscience. Recent diffusion-based methods typically map fMRI activity to a single neural embedding, using it as static guidance throughout the entire generation process. However, this fixed guidance collapses hierarchical neural information and is misaligned with the stage-dependent demands of image reconstruction. In response, we propose MindHier, a coarse-to-fine fMRI-to-image reconstruction framework built on scale-wise autoregressive modeling. MindHier introduces three components: a Hierarchical fMRI Encoder to extract multi-level neural embeddings, a Hierarchy-to-Hierarchy Alignment scheme to enforce layer-wise correspondence with CLIP features, and a Scale-Aware Coarse-to-Fine Neural Guidance strategy to inject these embeddings into autoregression at matching scales. These designs make MindHier an efficient and cognitively aligned alternative to diffusion-based methods by enabling a hierarchical reconstruction process that synthesizes global semantics before refining local details, akin to human visual perception. Extensive experiments on the NSD dataset show that MindHier achieves superior semantic fidelity, 4.67$\times$ faster inference, and more deterministic results than the diffusion-based baselines.

Applications · Neuroscience, Cognitive Science

Zhining Zhang, Wentao Zhu, Chi Han, Yizhou Wang, Heng Ji

Neuroscience has uncovered a fundamental mechanism of our social nature: human brain activity becomes synchronized with others in many social contexts involving interaction. Traditionally, social minds have been regarded as an exclusive property of living beings. Although large language models (LLMs) are widely accepted as powerful approximations of human behavior, with multi-LLM system being extensively explored to enhance their capabilities, it remains controversial whether they can be meaningfully compared to human social minds. In this work, we explore neural synchrony between socially interacting LLMs as an empirical evidence for this debate. Specifically, we introduce neural synchrony during social simulations as a novel proxy for analyzing the sociality of LLMs at the representational level. Through carefully designed experiments, we demonstrate that it reliably reflects both social engagement and temporal alignment in their interactions. Our findings indicate that neural synchrony between LLMs is strongly correlated with their social performance, highlighting an important link between neural synchrony and the social behaviors of LLMs. Our work offers a new perspective to examine the "social minds" of LLMs, highlighting surprising parallels in the internal dynamics that underlie human and LLM social interaction.

Applications · Neuroscience, Cognitive Science

Mohadeseh Shafiei Kafraj, Dmitry Krotov, Peter Latham

Krotov and Hopfield (2021) proposed a biologically plausible two-layer associative memory network with memory storage capacity exponential in the number of visible neurons. However, the capacity was only linear in the number of hidden neurons. This limitation arose from the choice of nonlinearity between the visible and hidden units, which enforced winner-take-all dynamics in the hidden layer, thereby restricting each hidden unit to encode only a single memory. We overcome this limitation by introducing a novel associative memory network with a threshold nonlinearity that enables distributed representations. In contrast to winner-take-all dynamics, where each hidden neuron is tied to an entire memory, our network allows hidden neurons to encode basic components shared across many memories. Consequently, complex patterns are represented through combinations of hidden neurons. These representations reduce redundancy and allow many correlated memories to be stored compositionally. Thus, we achieve much higher capacity: exponential in the number of hidden units, provided the number of visible units is sufficiently large relative to the number of hidden units. Exponential capacity arises because all binary states of the hidden units can become stable memory patterns. Moreover, the distributed hidden representation, which has much lower dimensionality than the visible layer, preserves class-discriminative structure, supporting efficient nonlinear decoding. These results establish a new regime for associative memory, enabling high-capacity, robust, and scalable architectures consistent with biological constraints.

Applications · Neuroscience, Cognitive Science

Yule Wang, Joseph Yu, Chengrui Li, Weihan Li, Anqi Wu

Understanding how neural populations in higher visual areas encode object-centered visual information remains a key challenge in computational neuroscience. Prior work has examined representational alignment between artificial neural networks and the visual cortex, but these findings are indirect and provide limited insight into the structure of neural population coding. Decoding-based methods can recover semantic features from neural activity, yet they do not reveal how these features are organized. This leaves an open question: how feature-specific visual information is distributed across neural populations, and whether it forms structured, semantically meaningful subspaces. To address this, we introduce MIG-Vis, a method that leverages diffusion models to visualize and validate visual-semantic attributes encoded in neural latent subspaces. MIG-Vis first learns a group-wise disentangled neural latent representation using a variational autoencoder, and then applies mutual information (MI)-guided diffusion synthesis to visualize the visual-semantic features encoded in each latent group. We validate MIG-Vis on multi-session neural spiking datasets from the inferior temporal (IT) cortex of two macaques. The synthesized results show that MIG-Vis identifies neural latent groups with clear semantic selectivity to diverse visual features, including object pose, inter-category variation, and intra-category content. These findings provide direct and interpretable evidence of structured semantic representation in higher visual cortex.

Applications · Neuroscience, Cognitive Science

Gaspard Oliviers, Mufeng Tang, Rafal Bogacz

Predictive coding (PC) is an influential computational model of visual learning and inference in the brain. Classical PC was proposed as a top-down generative model, where the brain actively predicts upcoming visual inputs, and inference minimises the prediction errors. Recent studies have also shown that PC can be formulated as a discriminative model, where sensory inputs predict neural activities in a feedforward manner. However, experimental evidence suggests that the brain employs both generative and discriminative inference, while unidirectional PC models show degraded performance in tasks requiring bidirectional processing. In this work, we propose bidirectional PC (bPC), a PC model that incorporates both generative and discriminative inference while maintaining a biologically plausible circuit implementation. We show that bPC matches or outperforms unidirectional models in their specialised generative or discriminative tasks, by developing an energy landscape that simultaneously suits both tasks. We also demonstrate bPC's superior performance in two biologically relevant tasks including multimodal learning and inference with missing information, suggesting that bPC resembles biological visual inference more closely.

Applications · Neuroscience, Cognitive Science

Grant McConachie, Emily Duniec, Florence Guerina, Meg Younger, Brian DePasquale

Featurizing odorants to enable robust prediction of their properties is difficult due to the complex activation patterns that odorants evoke in the olfactory system. Structurally similar odorants can elicit distinct activation patterns in both the sensory periphery (i.e., at the receptor level) and downstream brain circuits (i.e., at a perceptual level). Despite efforts to design odorant features to better predict how they interact with the olfactory system, there is still no universally accepted approach to this problem. We demonstrate that feature-based approaches that rely on pre-trained foundation models to generate odorant representations $\textit{do not}$ significantly outperform classical hand-designed features on odorant-receptor binding tasks. Instead, we show that it is necessary to fine-tune these features to increase predictive performance. To show this, we introduce a new model that creates olfaction-specific representations: $\textbf{L}$oRA-based $\textbf{O}$dorant-$\textbf{R}$eceptor $\textbf{A}$ffinity prediction with $\textbf{CROSS}$-attention ($\textbf{LORAX}$). We compare existing chemical foundation model representations to hand-designed physicochemical descriptors using feature-based methods and identify large information overlap between these representations, highlighting the necessity of fine-tuning to generate novel and superior odorant representations. We show that LORAX produces a feature space more closely aligned with olfactory neural representation, enabling it to outperform existing models on predictive tasks.

Applications · Neuroscience, Cognitive Science

Ritik Raina, Abe Leite, Alexandros Graikos, Seoyoung Ahn, Dimitris Samaras, Gregory Zelinsky

Human vision combines low-resolution “gist” information from the visual periphery with sparse but high-resolution information from fixated locations to construct a coherent understanding of a visual scene. In this paper, we introduce MetamerGen, a tool for generating scenes that are aligned with latent human scene representations. MetamerGen is a latent diffusion model that combines peripherally obtained scene gist information with information obtained from scene-viewing fixations to generate image metamers for what humans understand after viewing a scene. Generating images from both high and low resolution (i.e. “foveated”) inputs constitutes a novel image-to-image synthesis problem, which we tackle by introducing a dual-stream representation of the foveated scenes consisting of DINOv2 tokens that fuse detailed features from fixated areas with peripherally degraded features capturing scene context. To evaluate the perceptual alignment of MetamerGen generated images to latent human scene representations, we conducted a same-different behavioral experiment where participants were asked for a “same” or “different” response between the generated and the original image. With that, we identify scene generations that are indeed metamers for the latent scene representations formed by the viewers. MetamerGen is a powerful tool for understanding scene understanding. Our proof-of-concept analyses uncovered specific features at multiple levels of visual processing that contributed to human judgments. While it can generate metamers even conditioned on random fixations, we find that high-level semantic alignment most strongly predicts metamerism when the generated scenes are conditioned on viewers’ own fixated regions.

Applications · Neuroscience, Cognitive Science

Dongyang Li, Kunpeng Xie, Mingyang Wu, Yiwei Kong, Jiahua Tang, Haoyang Qin, Chen Wei, Quanying Liu

Whereas most brain–computer interface research has focused on decoding neural signals into behavior or intent, the reverse challenge—using controlled stimuli to steer brain activity—remains far less understood, particularly in the visual domain. However, designing images that consistently elicit desired neural responses is difficult: subjective states lack clear quantitative measures, and EEG feedback is both noisy and non-differentiable. We introduce MindPilot, the first closed-loop framework that uses EEG signals as optimization feedback to guide naturalistic image generation. Unlike prior work limited to invasive settings or low-level flicker stimuli, MindPilot leverages non-invasive EEG with natural images, treating the brain as a black-box function and employing a pseudo-model guidance mechanism to iteratively refine images without requiring explicit rewards or gradients. We validate MindPilot in both simulation and human experiments, demonstrating (i) efficient retrieval of semantic targets, (ii) closed-loop optimization of EEG features, and (iii) human-subject validations in mental matching and emotion regulation tasks. Our results establish the feasibility of EEG-guided image synthesis and open new avenues for non-invasive closed-loop brain modulation, bidirectional brain–computer interfaces, and neural signal–guided generative modeling.

Applications · Neuroscience, Cognitive Science

Marco Nurisso, Jesseba Fernando, Raj Deshpande, Alan Perotti, Raja Marjieh, Steven Frankland, Richard Lewis, Taylor Webb, Declan Campbell, Francesco Vaccarino 等

Intelligent systems must form internal representations that support both broad generalization and precise identification. Here, we show that these two goals are fundamentally in tension with one another. We derive closed-form expressions proving that any model whose representations have a finite semantic resolution, impairing long-range similarity computations, must lie on a universal Pareto front linking its probability of correct generalization $p_S$ and identification $p_I$. We extend this analysis to general input spaces and to parallel processing scenarios, predicting a sharp $1/n$ collapse in the capacity of processing multiple inputs at the same time. A minimal ReLU network reproduces these laws: a resolution boundary emerges during learning, and empirical $(p_S,p_I)$ trajectories closely match the theory for linearly decaying similarity. Finally, we show that the same limits appear in far more complex systems, including a convolutional neural network and state-of-the-art vision–language models, indicating that learned finite-resolution similarity are broad and foundational informational constraints rather than toy-model artifacts. Together, these results provide a precise theory of the generalization–identification tradeoff and clarify how semantic resolution shapes the representational capacity of deep networks and brains alike.

Applications · Neuroscience, Cognitive Science

Melika Honarmand, Ayati Sharma, Badr AlKhamissi, Johannes Mehrer, Martin Schrimpf

Dyslexia, a neurodevelopmental disorder characterized by persistent reading difficulties, is often linked to reduced activity of the visual word form area (VWFA) in the ventral occipito-temporal cortex. Traditional approaches to studying dyslexia, such as behavioral and neuroimaging methods, have provided valuable insights but remain limited in their ability to test causal hypotheses about the underlying mechanisms of reading impairments. In this study, we use large-scale vision-language models (VLMs) to simulate dyslexia by functionally identifying and perturbing artificial analogues of word processing. Using stimuli from cognitive neuroscience, we identify visual-word-form-selective units within VLMs and demonstrate that they predict human VWFA neural responses. Ablating model VWF units leads to selective impairments in reading tasks while general visual and language comprehension abilities remain intact. In particular, the resulting model matches dyslexic humans' phonological deficits without a significant change in orthographic processing, and mirrors dyslexic behavior in font sensitivity. Taken together, our modeling results replicate key characteristics of dyslexia and establish a computational framework for investigating brain disorders.

Applications · Neuroscience, Cognitive Science

Joséphine Raugel, Marc Szafraniec, Huy Vo, camille couprie, Jérémy Rapin, Stéphane d'Ascoli, Patrick Labatut, Piotr Bojanowski, Valentin Wyart, Jean-Remi King

Many AI models trained on natural images develop representations that resemble those of the human brain. However, the factors driving this brain-model similarity remain poorly understood. To disentangle how the model, training and data independently lead a neural network to develop brain-like representations, we train a family of self-supervised vision transformers (DINOv3) that systematically vary these factors. We compare their representations of images to those of the human brain recorded through fMRI and MEG, providing high resolution in both spatial and temporal analyses. We assess the brain-model similarity with three complementary metrics focusing on representational similarity, topographical organization, and temporal dynamics. We show that all three factors - model size, training amount, and image type - independently and interactively impact each of these brain similarity metrics. In particular, the largest DINOv3 models trained with the most human-centric images reach the highest brain-similarity. These findings generalize across seven additional models. This emergence of brain-like representations in AI models follows a specific chronology during training: models first align with the early representations of the sensory cortices, and only align with the late and prefrontal representations of the brain with considerably more training. Finally, this developmental trajectory is indexed by structural and functional properties of the human cortex: representations acquired last by the models specifically align with cortical areas with the largest developmental expansion, thickness, least myelination and slowest timescales. Overall, these findings disentangle the interplay between architecture and experience in shaping how artificial neural networks come to see the world as humans do, thus offering a promising framework to understand how the human brain comes to represent its visual world.

Applications · Neuroscience, Cognitive Science

Stéphane d'Ascoli, Jérémy Rapin, Yohann Benchetrit, Hubert Banville, Jean-Remi King

Historically, neuroscience has progressed by fragmenting into specialized domains, each focusing on isolated modalities, tasks, or brain regions. While fruitful, this approach hinders the development of a unified model of cognition. Here, we introduce TRIBE, the first deep neural network trained to predict brain responses to stimuli across multiple modalities, cortical areas and individuals. By combining the pretrained representations of text, audio and video foundational models and handling their time-evolving nature with a transformer, our model can precisely model the spatial and temporal fMRI responses to videos, achieving the first place in the Algonauts 2025 brain encoding competition with a significant margin over competitors. Ablations show that while unimodal models can reliably predict their corresponding cortical networks (e.g. visual or auditory networks), they are systematically outperformed by our multimodal model in high-level associative cortices. Currently applied to perception and comprehension, our approach paves the way towards building an integrative model of representations in the human brain. Our code is available at \url{https://anonymous.4open.science/r/algonauts-2025-C63E}.

Applications · Neuroscience, Cognitive Science

Ann Huang, Mitchell Ostrow, Satpreet H Singh, Leo Kozachkov, Ila Fiete, Kanaka Rajan

In control problems and basic scientific modeling, it is important to compare observations with dynamical simulations. For example, comparing two neural systems can shed light on the nature of emergent computations in the brain and deep neural networks. Recently, Ostrow et al. (2023) introduced Dynamical Similarity Analysis (DSA), a method to measure the similarity of two systems based on their recurrent dynamics rather than geometry or topology. However, DSA does not consider how inputs affect the dynamics, meaning that two similar systems, if driven differently, may be classified as different. Because real-world dynamical systems are rarely autonomous, it is important to account for the effects of input drive. To this end, we introduce a novel metric for comparing both intrinsic (recurrent) and input-driven dynamics, called InputDSA (iDSA). InputDSA extends the DSA framework by estimating and comparing both input and intrinsic dynamic operators using a variant of Dynamic Mode Decomposition with control (DMDc) based on subspace identification. We demonstrate that InputDSA can successfully compare partially observed, input-driven systems from noisy data. We show that when the true inputs are unknown, surrogate inputs can be substituted without a major deterioration in similarity estimates. We apply InputDSA on Recurrent Neural Networks (RNNs) trained with Deep Reinforcement Learning, identifying that high-performing networks are dynamically similar to one another, while low-performing networks are more diverse. Lastly, we apply InputDSA to neural data recorded from rats performing a cognitive task, demonstrating that it identifies a transition from input-driven evidence accumulation to intrinsically-driven decision-making. Our work demonstrates that InputDSA is a robust and efficient method for comparing intrinsic dynamics and the effect of external input on dynamical systems.

Applications · Neuroscience, Cognitive Science

Mingqing Xiao, Qingyan Meng, Zongpeng Zhang, Di He, Dongsheng Li, Zhouchen Lin

Brain-inspired neuromorphic computing with spiking neural networks (SNNs) is a promising energy-efficient computational approach. However, successfully training deep SNNs in a more biologically plausible and neuromorphic-hardware-friendly way is still challenging. Most recent methods leverage spatial and temporal backpropagation (BP), not adhering to neuromorphic properties. Despite the efforts of some online training methods, tackling spatial credit assignments by alternatives with competitive performance as spatial BP remains a significant problem. In this work, we propose a novel method, online pseudo-zeroth-order (OPZO) training. Our method only requires a single forward propagation with noise injection and direct top-down signals for spatial credit assignment, avoiding spatial BP's problem of symmetric weights and separate phases for layer-by-layer forward-backward propagation. OPZO solves the large variance problem of zeroth-order methods by the pseudo-zeroth-order formulation and momentum feedback connections, while having more guarantees than random feedback. Combining online training, OPZO can pave paths to on-chip SNN training. Experiments on neuromorphic and static datasets with both fully connected and convolutional networks demonstrate the effectiveness of OPZO with competitive performance compared with spatial BP, as well as estimated low training costs.

Applications · Neuroscience, Cognitive Science

Puria Radmard, Paul Bays, Máté Lengyel

Discovering the neural mechanisms underpinning cognition is one of the grand challenges of neuroscience. However, previous approaches for building models of recurrent neural network (RNN) dynamics that explain behaviour required iterative refinement of architectures and/or optimisation objectives, resulting in a piecemeal, and mostly heuristic, human-in-the-loop process. Here, we offer an alternative approach that automates the discovery of viable RNN mechanisms by explicitly training RNNs to reproduce behaviour, including the same characteristic errors and suboptimalities, that humans and animals produce in a cognitive task. Achieving this required two main innovations. First, as the amount of behavioural data that can be collected in experiments is often too limited to train RNNs, we use a non-parametric generative model of behavioural responses to produce surrogate data for training RNNs. Second, to capture all relevant statistical aspects of the data, rather than a limited number of hand-picked low-order moments as in previous moment-matching-based approaches, we developed a novel diffusion model-based approach for training RNNs. To showcase the potential of our approach, we chose a visual working memory task as our test-bed, as behaviour in this task is well known to produce response distributions that are patently multimodal (due to so-called swap errors). The resulting network dynamics correctly predicted previously reported qualitative features of neural data recorded in macaques. Importantly, these results were not possible to obtain with more traditional approaches, i.e., when only a limited set of behavioural signatures (rather than the full richness of behavioural response distributions) were fitted, or when RNNs were trained for task optimality (instead of reproducing behaviour). Our approach also yields novel predictions about the mechanism of swap errors, which can be readily tested in experiments. These results suggest that fitting RNNs to rich patterns of behaviour provides a powerful way to automatically discover the neural network dynamics supporting important cognitive functions.

Applications · Neuroscience, Cognitive Science

Lixing Niu, Jiapeng Li, Xingping Yu, Xinyi Dong, Shu Wang, Ruining Feng, Bo Wu, Ping Wei, Yisen Wang, Lifeng Fan

"Read the room", or the ability to infer others' mental states from subtle social cues, is a hallmark of human social intelligence, but remains a major challenge for current AI systems. Existing social reasoning datasets are limited in complexity, scale, and coverage of mental states, falling short of the rich causal dynamics found in real-life interactions. In this work, we introduce R$^3$-Bench, an evaluation benchmark with fine-grained annotations of belief, intent, desire, emotion, and their causal chains in complex scenarios. Furthermore, we introduce R$^3$-FDT, a large-scale training set generated through a novel automated pipeline with the same chain structure. We conduct a comprehensive evaluation of state-of-the-art (SOTA) large vision-language models (LVLMs) on R$^3$-Bench, revealing substantial deficiencies in consistent multi-step social reasoning. We also fine-tune a 7B model on R$^3$-FDT, achieving notable improvements across multiple relevant benchmarks. Our contributions are three-fold: (i) a novel benchmark with richly annotated, multi-step causal reasoning data; (ii) systematic evidence that SOTA LVLMs fall far short of human-level reasoning; (iii) a scalable training dataset that significantly enhances social reasoning performance. The datasets and code are available at: .

Applications · Neuroscience, Cognitive Science

Pembe Gizem Özdil, Chuanfang Ning, Jasper Phelps, Sibo Wang-Chen, Guy Elisha, Auke Ijspeert, Pavan Ramdya

Computational models are critical for advancing our understanding of how neural, biomechanical, and physical systems interact to orchestrate animal behavior. Despite the availability of near-complete reconstructions of the Drosophila melanogaster central nervous system, musculature, and exoskeleton, anatomically and physically grounded models of fly leg muscles are still missing. Such models provide an indispensable bridge between motor neuron activity and joint movements. Here, we introduce the first 3D, data-driven musculoskeletal model of Drosophila legs, implemented in both OpenSim and MuJoCo simulation environments. Our model incorporates a Hill-type muscle representation based on high-resolution X-ray scans from multiple fixed specimens. We present a pipeline for constructing muscle models from morphological imaging data and for optimizing unknown muscle parameters specific to the fly. We then combine our musculoskeletal models with detailed 3D pose estimation data from behaving flies to achieve muscle-actuated behavioral replay in OpenSim. Simulations of muscle activity across diverse walking and grooming behaviors predict coordinated muscle synergies that can be tested experimentally. Furthermore, by training imitation learning policies in MuJoCo, we examine the effect of different passive joint properties on learning speed and find that damping and stiffness facilitate learning. Overall, our model enables the investigation of motor control in an experimentally tractable model organism, providing insight into how biomechanics contributes to the generation of complex limb movements. Moreover, it can be used to control embodied artificial agents to generate naturalistic and compliant locomotion in simulated environments.

Applications · Neuroscience, Cognitive Science

Hadar, Omer Shubi, Yoav Meiri, Amit Heshes, Yevgeni Berzak

When reading, we often have specific information that interests us in a text. For example, you might be reading this paper because you are curious about LLMs for eye movements in reading, the experimental design, or perhaps you wonder ``This sounds like science fiction. Does it actually work?''. More broadly, in daily life, people approach texts with any number of text-specific goals that guide their reading behavior. In this work, we ask whether open-ended reading goals can be automatically decoded solely from eye movements in reading. To address this question, we introduce goal decoding tasks and evaluation frameworks using large-scale eye tracking for reading data in English with hundreds of text-specific information seeking tasks and auxiliary annotations of task-critical information. We develop and compare several discriminative and generative multimodal text and eye movements LLMs for these tasks. Our experiments show considerable success on selecting the correct goal among several options, and even progress towards free-form textual reconstruction of the precise goal formulation. We further tie model performance to cognitively interpretable aspects of human gaze behavior. These results open the door for further scientific investigation of goal driven reading, as well as the development of educational and assistive technologies that will rely on real-time decoding of reader goals from their eye movements.

Applications · Neuroscience, Cognitive Science

Lorenzo Tausani, Paolo Muratore, Morgan B Talbot, Giacomo Amerio, Gabriel Kreiman, Davide Zoccolan

Uncovering which feature combinations are encoded by visual units is critical to understanding how images are transformed into representations that support recognition. While existing feature visualization approaches typically infer a unit's most exciting images, this is insufficient to reveal the manifold of transformations under which responses remain invariant, which is critical to generalization in vision. Here we introduce Stretch-and-Squeeze (SnS), an unbiased, model-agnostic, and gradient-free framework to systematically characterize a unit’s maximally invariant stimuli, and its vulnerability to adversarial perturbations, in both biological and artificial visual systems. SnS frames these transformations as bi-objective optimization problems. To probe invariance, SnS seeks image perturbations that maximally alter (stretch) the representation of a reference stimulus in a given processing stage while preserving unit activation downstream (squeeze). To probe adversarial sensitivity, stretching and squeezing are reversed to maximally perturb unit activation while minimizing changes to the upstream representation. Applied to CNNs, SnS revealed invariant transformations that were farther from a reference image in pixel-space than those produced by affine transformations, while more strongly preserving the target unit's response. The discovered invariant images differed depending on the stage of the image representation used for optimization: pixel-level changes primarily affected luminance and contrast, while stretching mid- and late-layer representations mainly altered texture and pose. By measuring how well the hierarchical invariant images obtained for $L_2$-robust (i.e., adversarially trained) networks were classified by humans and other observer networks, we discovered a substantial drop in their interpretability when the representation was stretched in deep layers, while the opposite trend was found for standard (i.e., not robustified) models. This indicates that $L_2$ adversarial training fails to increase the interpretability of high-level invariances, despite good perceptual alignment between humans and robustified models at the pixel level. This demonstrates how SnS can be used as a powerful new tool to measure the alignment between artificial and biological vision.

Applications · Neuroscience, Cognitive Science

Lulu Gong, Shreya Saxena

Linear dynamical systems (LDSs) have been powerful tools for modeling high-dimensional time-series data across many domains, including neuroscience. However, a single LDS often struggles to capture the heterogeneity of neural data, where trajectories recorded under different conditions can have variations in their dynamics. Mixtures of linear dynamical systems (MoLDS) provide a path to model these variations in temporal dynamics for different observed trajectories. However, MoLDS remains difficult to apply in complex and noisy settings, limiting its practical use in neural data analysis. Tensor-based moment methods can provide global identifiability guarantees for MoLDS, but their practical performance degrades in high-noise or complex scenarios. Commonly used expectation-maximization (EM) methods offer flexibility in fitting latent models but are highly sensitive to initialization and prone to poor local minima. Here, we propose a tensor-based moment method that provides identifiability guarantees for learning MoLDS, which can be followed by EM updates to combine the strengths of both approaches. The novelty in our approach lies in the construction of moment tensors using the input-output data, on which we then apply Simultaneous Matrix Diagonalization (SMD) to recover globally consistent estimates of mixture weights and system parameters. These estimates can then be refined through a full Kalman EM algorithm, with closed-form updates for all LDS parameters. We validate our framework on synthetic benchmarks and real-world datasets. On synthetic data, the proposed Tensor-EM method achieves more reliable recovery and improved robustness compared to either pure tensor or randomly initialized EM methods. We then apply this method to two neural datasets from non-human primates doing reaching tasks. For both datasets, our method successfully models and clusters different conditions as separate subsystems. These results demonstrate that MoLDS provides an effective framework for modeling complex neural data in different brain regions, and that Tensor-EM is a principled and reliable approach to MoLDS learning for these applications.