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Applications/Neuroscience, Cognitive Science

Ilia Sucholutsky, Tom Griffiths

Should we care whether AI systems have representations of the world that are similar to those of humans? We provide an information-theoretic analysis that suggests that there should be a U-shaped relationship between the degree of representational alignment with humans and performance on few-shot learning tasks. We confirm this prediction empirically, finding such a relationship in an analysis of the performance of 491 computer vision models. We also show that highly-aligned models are more robust to both natural adversarial attacks and domain shifts. Our results suggest that human-alignment is often a sufficient, but not necessary, condition for models to make effective use of limited data, be robust, and generalize well.

Applications/Neuroscience, Cognitive Science

Arthur Pellegrino, N Alex Cayco Gajic, Angus Chadwick

Learning relies on coordinated synaptic changes in recurrently connected populations of neurons. Therefore, understanding the collective evolution of synaptic connectivity over learning is a key challenge in neuroscience and machine learning. In particular, recent work has shown that the weight matrices of task-trained RNNs are typically low rank, but how this low rank structure unfolds over learning is unknown. To address this, we investigate the rank of the 3-tensor formed by the weight matrices throughout learning. By fitting RNNs of varying rank to large-scale neural recordings during a motor learning task, we find that the inferred weights are low-tensor-rank and therefore evolve over a fixed low-dimensional subspace throughout the entire course of learning. We next validate the observation of low-tensor-rank learning on an RNN trained to solve the same task. Finally, we present a set of mathematical results bounding the matrix and tensor ranks of gradient descent learning dynamics which show that low-tensor-rank weights emerge naturally in RNNs trained to solve low-dimensional tasks. Taken together, our findings provide insight on the evolution of population connectivity over learning in both biological and artificial neural networks, and enable reverse engineering of learning-induced changes in recurrent dynamics from large-scale neural recordings.

Applications/Neuroscience, Cognitive Science

Lyndon Duong, Eero Simoncelli, Dmitri Chklovskii, David Lipshutz

Neurons in early sensory areas rapidly adapt to changing sensory statistics, both by normalizing the variance of their individual responses and by reducing correlations between their responses. Together, these transformations may be viewed as an adaptive form of statistical whitening. Existing mechanistic models of adaptive whitening exclusively use either synaptic plasticity or gain modulation as the biological substrate for adaptation; however, on their own, each of these models has significant limitations. In this work, we unify these approaches in a normative multi-timescale mechanistic model that adaptively whitens its responses with complementary computational roles for synaptic plasticity and gain modulation. Gains are modified on a fast timescale to adapt to the current statistical context, whereas synapses are modified on a slow timescale to match structural properties of the input statistics that are invariant across contexts. Our model is derived from a novel multi-timescale whitening objective that factorizes the inverse whitening matrix into basis vectors, which correspond to synaptic weights, and a diagonal matrix, which corresponds to neuronal gains. We test our model on synthetic and natural datasets and find that the synapses learn optimal configurations over long timescales that enable adaptive whitening on short timescales using gain modulation.

Applications/Neuroscience, Cognitive Science

Liangyu Chen, Bo Li, Sheng Shen, Jingkang Yang, Chunyuan Li, Kurt Keutzer, Trevor Darrell, Ziwei Liu

Visual reasoning requires multimodal perception and commonsense cognition of the world. Recently, multiple vision-language models (VLMs) have been proposed with excellent commonsense reasoning ability in various domains. However, how to harness the collective power of these complementary VLMs is rarely explored. Existing methods like ensemble still struggle to aggregate these models with the desired higher-order communications. In this work, we propose Cola, a novel paradigm that coordinates multiple VLMs for visual reasoning. Our key insight is that a large language model (LLM) can efficiently coordinate multiple VLMs by facilitating natural language communication that leverages their distinct and complementary capabilities. Extensive experiments demonstrate that our instruction tuning variant, Cola-FT, achieves state-of-the-art performance on visual question answering (VQA), outside knowledge VQA, visual entailment, and visual spatial reasoning tasks. Moreover, we show that our in-context learning variant, Cola-Zero, exhibits competitive performance in zero and few-shot settings, without finetuning. Through systematic ablation studies and visualizations, we validate that a coordinator LLM indeed comprehends the instruction prompts as well as the separate functionalities of VLMs; it then coordinates them to enable impressive visual reasoning capabilities.

Applications/Neuroscience, Cognitive Science

Praveen Venkatesh, Corbett Bennett, Sam Gale, Tamina Ramirez, Greggory Heller, Severine Durand, Shawn Olsen, Stefan Mihalas

Recent advances in neuroscientific experimental techniques have enabled us to simultaneously record the activity of thousands of neurons across multiple brain regions. This has led to a growing need for computational tools capable of analyzing how task-relevant information is represented and communicated between several brain regions. Partial information decompositions (PIDs) have emerged as one such tool, quantifying how much unique, redundant and synergistic information two or more brain regions carry about a task-relevant message. However, computing PIDs is computationally challenging in practice, and statistical issues such as the bias and variance of estimates remain largely unexplored. In this paper, we propose a new method for efficiently computing and estimating a PID definition on multivariate Gaussian distributions. We show empirically that our method satisfies an intuitive additivity property, and recovers the ground truth in a battery of canonical examples, even at high dimensionality. We also propose and evaluate, for the first time, a method to correct the bias in PID estimates at finite sample sizes. Finally, we demonstrate that our Gaussian PID effectively characterizes inter-areal interactions in the mouse brain, revealing higher redundancy between visual areas when a stimulus is behaviorally relevant.

Applications/Neuroscience, Cognitive Science

Wei Fang, Zhaofei Yu, Zhaokun Zhou, Ding Chen, Yanqi Chen, Zhengyu Ma, Timothée Masquelier, Yonghong Tian

Vanilla spiking neurons in Spiking Neural Networks (SNNs) use charge-fire-reset neuronal dynamics, which can only be simulated serially and can hardly learn long-time dependencies. We find that when removing reset, the neuronal dynamics can be reformulated in a non-iterative form and parallelized. By rewriting neuronal dynamics without reset to a general formulation, we propose the Parallel Spiking Neuron (PSN), which generates hidden states that are independent of their predecessors, resulting in parallelizable neuronal dynamics and extremely high simulation speed. The weights of inputs in the PSN are fully connected, which maximizes the utilization of temporal information. To avoid the use of future inputs for step-by-step inference, the weights of the PSN can be masked, resulting in the masked PSN. By sharing weights across time-steps based on the masked PSN, the sliding PSN is proposed to handle sequences of varying lengths. We evaluate the PSN family on simulation speed and temporal/static data classification, and the results show the overwhelming advantage of the PSN family in efficiency and accuracy. To the best of our knowledge, this is the first study about parallelizing spiking neurons and can be a cornerstone for the spiking deep learning research. Our codes are available at https://github.com/fangwei123456/Parallel-Spiking-Neuron.

Applications/Neuroscience, Cognitive Science

Xiaohan Lin, Liyuan Li, Boxin Shi, Tiejun Huang, Yuanyuan Mi, Si Wu

Attractor networks require neuronal connections to be highly structured in order to maintain attractor states that represent information, while excitation and inhibition balanced networks (E-INNs) require neuronal connections to be random and sparse to generate irregular neuronal firings. Despite being regarded as canonical models of neural circuits, both types of networks are usually studied in isolation, and it remains unclear how they coexist in the brain, given their very different structural demands. In this study, we investigate the compatibility of continuous attractor neural networks (CANNs) and E-INNs. In line with recent experimental data, we find that a neural circuit can exhibit both the traits of CANNs and E-INNs if the neuronal synapses consist of two sets: one set is strong and fast for irregular firing, and the other set is weak and slow for attractor dynamics. Our results from simulations and theoretical analysis reveal that the network also exhibits enhanced performance compared to the case of using only one set of synapses, with accelerated convergence of attractor states and retained E-I balanced condition for localized input. We also apply the network model to solve a real-world tracking problem and demonstrate that it can track fast-moving objects well. We hope that this study provides insight into how structured neural computations are realized by irregular firings of neurons.

Applications/Neuroscience, Cognitive Science

Christos Sourmpis, Carl Petersen, Wulfram Gerstner, Guillaume Bellec

Simultaneous behavioral and electrophysiological recordings call for new methods to reveal the interactions between neural activity and behavior. A milestone would be an interpretable model of the co-variability of spiking activity and behavior across trials. Here, we model a mouse cortical sensory-motor pathway in a tactile detection task reported by licking with a large recurrent spiking neural network (RSNN), fitted to the recordings via gradient-based optimization. We focus specifically on the difficulty to match the trial-to-trial variability in the data. Our solution relies on optimal transport to define a distance between the distributions of generated and recorded trials. The technique is applied to artificial data and neural recordings covering six cortical areas. We find that the resulting RSNN can generate realistic cortical activity and predict jaw movements across the main modes of trial-to-trial variability. Our analysis also identifies an unexpected mode of variability in the data corresponding to task-irrelevant movements of the mouse.

Applications/Neuroscience, Cognitive Science

Amin Nejatbakhsh, Isabel Garon, Alex Williams

The signaling capacity of a neural population depends on the scale and orientation of its covariance across trials. Estimating this "noise" covariance is challenging and is thought to require a large number of stereotyped trials. New approaches are therefore needed to interrogate the structure of neural noise across rich, naturalistic behaviors and sensory experiences, with few trials per condition. Here, we exploit the fact that conditions are smoothly parameterized in many experiments and leverage Wishart process models to pool statistical power from trials in neighboring conditions. We demonstrate that these models perform favorably on experimental data from the mouse visual cortex and monkey motor cortex relative to standard covariance estimators. Moreover, they produce smooth estimates of covariance as a function of stimulus parameters, enabling estimates of noise correlations in entirely unseen conditions as well as continuous estimates of Fisher information—a commonly used measure of signal fidelity. Together, our results suggest that Wishart processes are broadly applicable tools for quantification and uncertainty estimation of noise correlations in trial-limited regimes, paving the way toward understanding the role of noise in complex neural computations and behavior.

Applications/Neuroscience, Cognitive Science

Jingyuan Li, Leo Scholl, Trung Le, Pavithra Rajeswaran, Amy Orsborn, Eli Shlizerman

Latent Variable Models (LVMs) propose to model the dynamics of neural populations by capturing low-dimensional structures that represent features involved in neural activity. Recent LVMs are based on deep learning methodology where a deep neural network is trained to reconstruct the same neural activity given as input and as a result to build the latent representation. Without taking past or future activity into account such a task is non-causal. In contrast, the task of forecasting neural activity based on given input extends the reconstruction task. LVMs that are trained on such a task could potentially capture temporal causality constraints within its latent representation. Forecasting has received less attention than reconstruction due to recording challenges such as limited neural measurements and trials. In this work, we address modeling neural population dynamics via the forecasting task and improve forecasting performance by including a prior, which consists of pairwise neural unit interaction as a multivariate dynamic system. Our proposed model---Additive, Multiplicative, and Adaptive Graph Neural Network (AMAG)---leverages additive and multiplicative message-passing operations analogous to the interactions in neuronal systems and adaptively learns the interaction among neural units to forecast their future activity. We demonstrate the advantage of AMAG compared to non-GNN based methods on synthetic data and multiple modalities of neural recordings (field potentials from penetrating electrodes or surface-level micro-electrocorticography) from four rhesus macaques. Our results show the ability of AMAG to recover ground truth spatial interactions and yield estimation for future dynamics of the neural population.

Applications/Neuroscience, Cognitive Science

Dominik Straub, Matthias Schultheis, Heinz Koeppl, Constantin Rothkopf

Inverse optimal control can be used to characterize behavior in sequential decision-making tasks. Most existing work, however, is limited to fully observable or linear systems, or requires the action signals to be known. Here, we introduce a probabilistic approach to inverse optimal control for partially observable stochastic non-linear systems with unobserved action signals, which unifies previous approaches to inverse optimal control with maximum causal entropy formulations. Using an explicit model of the noise characteristics of the sensory and motor systems of the agent in conjunction with local linearization techniques, we derive an approximate likelihood function for the model parameters, which can be computed within a single forward pass. We present quantitative evaluations on stochastic and partially observable versions of two classic control tasks and two human behavioral tasks. Importantly, we show that our method can disentangle perceptual factors and behavioral costs despite the fact that epistemic and pragmatic actions are intertwined in sequential decision-making under uncertainty, such as in active sensing and active learning. The proposed method has broad applicability, ranging from imitation learning to sensorimotor neuroscience.

Applications/Neuroscience, Cognitive Science

Guy Gaziv, Michael Lee, James J DiCarlo

The visual object category reports of artificial neural networks (ANNs) are notoriously sensitive to tiny, adversarial image perturbations. Because human category reports (aka human percepts) are thought to be insensitive to those same small-norm perturbations -- and locally stable in general -- this argues that ANNs are incomplete scientific models of human visual perception. Consistent with this, we show that when small-norm image perturbations are generated by standard ANN models, human object category percepts are indeed highly stable. However, in this very same "human-presumed-stable" regime, we find that robustified ANNs reliably discover low-norm image perturbations that strongly disrupt human percepts. These previously undetectable human perceptual disruptions are massive in amplitude, approaching the same level of sensitivity seen in robustified ANNs. Further, we show that robustified ANNs support precise perceptual state interventions: they guide the construction of low-norm image perturbations that strongly alter human category percepts toward specific prescribed percepts. In sum, these contemporary models of biological visual processing are now accurate enough to guide strong and precise interventions on human perception.

Applications/Neuroscience, Cognitive Science

Peter Kim, Junbeom Kwon, Sunghwan Joo, Sangyoon Bae, Donggyu Lee, Yoonho Jung, Shinjae Yoo, Jiook Cha, Taesup Moon

Modeling spatiotemporal brain dynamics from high-dimensional data, such as functional Magnetic Resonance Imaging (fMRI), is a formidable task in neuroscience. Existing approaches for fMRI analysis utilize hand-crafted features, but the process of feature extraction risks losing essential information in fMRI scans. To address this challenge, we present SwiFT (Swin 4D fMRI Transformer), a Swin Transformer architecture that can learn brain dynamics directly from fMRI volumes in a memory and computation-efficient manner. SwiFT achieves this by implementing a 4D window multi-head self-attention mechanism and absolute positional embeddings. We evaluate SwiFT using multiple large-scale resting-state fMRI datasets, including the Human Connectome Project (HCP), Adolescent Brain Cognitive Development (ABCD), and UK Biobank (UKB) datasets, to predict sex, age, and cognitive intelligence. Our experimental outcomes reveal that SwiFT consistently outperforms recent state-of-the-art models. Furthermore, by leveraging its end-to-end learning capability, we show that contrastive loss-based self-supervised pre-training of SwiFT can enhance performance on downstream tasks. Additionally, we employ an explainable AI method to identify the brain regions associated with sex classification. To our knowledge, SwiFT is the first Swin Transformer architecture to process dimensional spatiotemporal brain functional data in an end-to-end fashion. Our work holds substantial potential in facilitating scalable learning of functional brain imaging in neuroscience research by reducing the hurdles associated with applying Transformer models to high-dimensional fMRI.

Applications/Neuroscience, Cognitive Science

Zijiao Chen, Jiaxin Qing, Juan Helen Zhou

Reconstructing human vision from brain activities has been an appealing task that helps to understand our cognitive process. Even though recent research has seen great success in reconstructing static images from non-invasive brain recordings, work on recovering continuous visual experiences in the form of videos is limited. In this work, we propose Mind-Video that learns spatiotemporal information from continuous fMRI data of the cerebral cortex progressively through masked brain modeling, multimodal contrastive learning with spatiotemporal attention, and co-training with an augmented Stable Diffusion model that incorporates network temporal inflation. We show that high-quality videos of arbitrary frame rates can be reconstructed with Mind-Video using adversarial guidance. The recovered videos were evaluated with various semantic and pixel-level metrics. We achieved an average accuracy of 85% in semantic classification tasks and 0.19 in structural similarity index (SSIM), outperforming the previous state-of-the-art by 45%. We also show that our model is biologically plausible and interpretable, reflecting established physiological processes.

Applications/Neuroscience, Cognitive Science

Andrew Luo, Maggie Henderson, Leila Wehbe, Michael Tarr

A long standing goal in neuroscience has been to elucidate the functional organization of the brain. Within higher visual cortex, functional accounts have remained relatively coarse, focusing on regions of interest (ROIs) and taking the form of selectivity for broad categories such as faces, places, bodies, food, or words. Because the identification of such ROIs has typically relied on manually assembled stimulus sets consisting of isolated objects in non-ecological contexts, exploring functional organization without robust a priori hypotheses has been challenging. To overcome these limitations, we introduce a data-driven approach in which we synthesize images predicted to activate a given brain region using paired natural images and fMRI recordings, bypassing the need for category-specific stimuli. Our approach -- Brain Diffusion for Visual Exploration ("BrainDiVE") -- builds on recent generative methods by combining large-scale diffusion models with brain-guided image synthesis. Validating our method, we demonstrate the ability to synthesize preferred images with appropriate semantic specificity for well-characterized category-selective ROIs. We then show that BrainDiVE can characterize differences between ROIs selective for the same high-level category. Finally we identify novel functional subdivisions within these ROIs, validated with behavioral data. These results advance our understanding of the fine-grained functional organization of human visual cortex, and provide well-specified constraints for further examination of cortical organization using hypothesis-driven methods.

Applications/Neuroscience, Cognitive Science

Tianqin Li, Ziqi Wen, Yangfan Li, Tai Sing Lee

Current deep-learning models for object recognition are known to be heavily biased toward texture. In contrast, human visual systems are known to be biased toward shape and structure. What could be the design principles in human visual systems that led to this difference? How could we introduce more shape bias into the deep learning models? In this paper, we report that sparse coding, a ubiquitous principle in the brain, can in itself introduce shape bias into the network. We found that enforcing the sparse coding constraint using a non-differential Top-K operation can lead to the emergence of structural encoding in neurons in convolutional neural networks, resulting in a smooth decomposition of objects into parts and subparts and endowing the networks with shape bias. We demonstrated this emergence of shape bias and its functional benefits for different network structures with various datasets. For object recognition convolutional neural networks, the shape bias leads to greater robustness against style and pattern change distraction. For the image synthesis generative adversary networks, the emerged shape bias leads to more coherent and decomposable structures in the synthesized images. Ablation studies suggest that sparse codes tend to encode structures, whereas the more distributed codes tend to favor texture. Our code is host at the github repository: https://topk-shape-bias.github.io/

Applications/Neuroscience, Cognitive Science

Tianqin Li, Ziqi Wen, Yangfan Li, Tai Sing Lee

Current deep-learning models for object recognition are known to be heavily biased toward texture. In contrast, human visual systems are known to be biased toward shape and structure. What could be the design principles in human visual systems that led to this difference? How could we introduce more shape bias into the deep learning models? In this paper, we report that sparse coding, a ubiquitous principle in the brain, can in itself introduce shape bias into the network. We found that enforcing the sparse coding constraint using a non-differential Top-K operation can lead to the emergence of structural encoding in neurons in convolutional neural networks, resulting in a smooth decomposition of objects into parts and subparts and endowing the networks with shape bias. We demonstrated this emergence of shape bias and its functional benefits for different network structures with various datasets. For object recognition convolutional neural networks, the shape bias leads to greater robustness against style and pattern change distraction. For the image synthesis generative adversary networks, the emerged shape bias leads to more coherent and decomposable structures in the synthesized images. Ablation studies suggest that sparse codes tend to encode structures, whereas the more distributed codes tend to favor texture. Our code is host at the github repository: https://topk-shape-bias.github.io/

Applications/Neuroscience, Cognitive Science

Dayong Ren, Zhe Ma, Yuanpei Chen, Weihang Peng, Xiaode Liu, Yuhan Zhang, Yufei Guo

Recently, Spiking Neural Networks (SNNs), enjoying extreme energy efficiency, have drawn much research attention on 2D visual recognition and shown gradually increasing application potential. However, it still remains underexplored whether SNNs can be generalized to 3D recognition. To this end, we present Spiking PointNet in the paper, the first spiking neural model for efficient deep learning on point clouds. We discover that the two huge obstacles limiting the application of SNNs in point clouds are: the intrinsic optimization obstacle of SNNs that impedes the training of a big spiking model with large time steps, and the expensive memory and computation cost of PointNet that makes training a big spiking point model unrealistic. To solve the problems simultaneously, we present a trained-less but learning-more paradigm for Spiking PointNet with theoretical justifications and in-depth experimental analysis. In specific, our Spiking PointNet is trained with only a single time step but can obtain better performance with multiple time steps inference, compared to the one trained directly with multiple time steps. We conduct various experiments on ModelNet10, ModelNet40 to demonstrate the effectiveness of Sipiking PointNet. Notably, our Spiking PointNet even can outperform its ANN counterpart, which is rare in the SNN field thus providing a potential research direction for the following work. Moreover, Spiking PointNet shows impressive speedup and storage saving in the training phase. Our code is open-sourced at https://github.com/DayongRen/Spiking-PointNet.

Applications/Neuroscience, Cognitive Science

Man Yao, JiaKui Hu, Zhaokun Zhou, Li Yuan, Yonghong Tian, Bo Xu, Guoqi Li

Spiking Neural Networks (SNNs) provide an energy-efficient deep learning option due to their unique spike-based event-driven (i.e., spike-driven) paradigm. In this paper, we incorporate the spike-driven paradigm into Transformer by the proposed Spike-driven Transformer with four unique properties: (1) Event-driven, no calculation is triggered when the input of Transformer is zero; (2) Binary spike communication, all matrix multiplications associated with the spike matrix can be transformed into sparse additions; (3) Self-attention with linear complexity at both token and channel dimensions; (4) The operations between spike-form Query, Key, and Value are mask and addition. Together, there are only sparse addition operations in the Spike-driven Transformer. To this end, we design a novel Spike-Driven Self-Attention (SDSA), which exploits only mask and addition operations without any multiplication, and thus having up to $87.2\times$ lower computation energy than vanilla self-attention. Especially in SDSA, the matrix multiplication between Query, Key, and Value is designed as the mask operation. In addition, we rearrange all residual connections in the vanilla Transformer before the activation functions to ensure that all neurons transmit binary spike signals. It is shown that the Spike-driven Transformer can achieve 77.1\% top-1 accuracy on ImageNet-1K, which is the state-of-the-art result in the SNN field.

Applications/Neuroscience, Cognitive Science

Kanishk Gandhi, Jan-Philipp Fraenken, Tobias Gerstenberg, Noah Goodman

As Large Language Models (LLMs) become increasingly integrated into our everyday lives, understanding their ability to comprehend human mental states becomes critical for ensuring effective interactions. However, despite the recent attempts to assess the Theory-of-Mind (ToM) reasoning capabilities of LLMs, the degree to which these models can align with human ToM remains a nuanced topic of exploration. This is primarily due to two distinct challenges: (1) the presence of inconsistent results from previous evaluations, and (2) concerns surrounding the validity of existing evaluation methodologies. To address these challenges, we present a novel framework for procedurally generating evaluations with LLMs by populating causal templates. Using our framework, we create a new social reasoning benchmark (BigToM) for LLMs which consists of 25 controls and 5,000 model-written evaluations. We find that human participants rate the quality of our benchmark higher than previous crowd-sourced evaluations and comparable to expert-written evaluations. Using BigToM, we evaluate the social reasoning capabilities of a variety of LLMs and compare model performances with human performance. Our results suggest that GPT4 has ToM capabilities that mirror human inference patterns, though less reliable, while other LLMs struggle.