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Optimization/Discrete and Combinatorial Optimization

Moses Charikar, Monika Henzinger, Lunjia Hu, Maximilian Vötsch, Erik Waingarten

Clustering is a fundamental problem in unsupervised machine learning with many applications in data analysis. Popular clustering algorithms such as Lloyd's algorithm and $k$-means++ can take $\Omega(ndk)$ time when clustering $n$ points in a $d$-dimensional space (represented by an $n\times d$ matrix $X$) into $k$ clusters. On massive datasets with moderate to large $k$, the multiplicative $k$ factor can become very expensive. We introduce a simple randomized clustering algorithm that provably runs in expected time $O(\mathsf{nnz}(X) + n\log n)$ for arbitrary $k$. Here $\mathsf{nnz}(X)$ is the total number of non-zero entries in the input dataset $X$, which is upper bounded by $nd$ and can be significantly smaller for sparse datasets. We prove that our algorithm achieves approximation ratio $\widetilde{O}(k^4)$ on any input dataset for the $k$-means objective, and our experiments show that the quality of the clusters found by our algorithm is usually much better than this worst-case bound. We use our algorithm for $k$-means clustering and for coreset construction; our experiments show that it gives a new tradeoff between running time and cluster quality compared to previous state-of-the-art methods for these tasks. Our theoretical analysis is based on novel results of independent interest. We show that the approximation ratio achieved after a random one-dimensional projection can be lifted to the original points and that $k$-means++ seeding can be implemented in expected time $O(n\log n)$ in one dimension.

Optimization/Discrete and Combinatorial Optimization

Kiarash Banihashem, Leyla Biabani, Samira Goudarzi, MohammadTaghi Hajiaghayi, Peyman Jabbarzade, Morteza Monemizadeh

Maximizing submodular functions has been increasingly used in many applications of machine learning, such as data summarization, recommendation systems, and feature selection. Moreover, there has been a growing interest in both submodular maximization and dynamic algorithms. In 2020, Monemizadeh and Lattanzi, Mitrovic, Norouzi-Fard, Tarnawski, and Zadimoghaddam initiated developing dynamic algorithms for the monotone submodular maximization problem under the cardinality constraint $k$. In 2022, Chen and Peng studied the complexity of this problem and raised an important open question: "\emph{Can we extend [fully dynamic] results (algorithm or hardness) to non-monotone submodular maximization?}". We affirmatively answer their question by demonstrating a reduction from maximizing a non-monotone submodular function under the cardinality constraint $k$ to maximizing a monotone submodular function under the same constraint. Through this reduction, we obtain the first dynamic algorithms to solve the non-monotone submodular maximization problem under the cardinality constraint $k$. Our algorithms maintain an $(8+\epsilon)$-approximate of the solution and use expected amortized $O(\epsilon^{-3}k^3\log^3(n)\log(k))$ or $O(\epsilon^{-1}k^2\log^3(k))$ oracle queries per update, respectively. Furthermore, we showcase the benefits of our dynamic algorithm for video summarization and max-cut problems on several real-world data sets.

Optimization/Discrete and Combinatorial Optimization

Nathaniel Lahn, Sharath Raghvendra, Kaiyi Zhang

Optimal Transport is a popular distance metric for measuring similarity between distributions. Exact and approximate combinatorial algorithms for computing the optimal transport distance are hard to parallelize. This has motivated the development of numerical solvers (e.g. Sinkhorn method) that can exploit GPU parallelism and produce approximate solutions. We introduce the first parallel combinatorial algorithm to find an additive $\varepsilon$-approximation of the OT distance. The parallel complexity of our algorithm is $O(\log(n)/ \varepsilon^2)$ where $n$ is the total support size for the input distributions. In Massive Parallel Computation (MPC) frameworks such as Hadoop and MapReduce, our algorithm computes an $\varepsilon$-approximate transport plan in $O(\log (\log (n/\varepsilon))/\varepsilon^2)$ rounds with $O(n/\varepsilon)$ space per machine; all prior algorithms in the MPC framework take $\Omega(\log n)$ rounds. We also provide a GPU-friendly matrix-based interpretation of our algorithm where each step of the algorithm is row or column manipulation of the matrix. Experiments suggest that our combinatorial algorithm is faster than the state-of-the-art approximate solvers in the GPU, especially for higher values of $n$.

Optimization/Discrete and Combinatorial Optimization

Taihei Oki, Shinsaku Sakaue

Recent years have seen a growing interest in accelerating optimization algorithms with machine-learned predictions. Sakaue and Oki (NeurIPS 2022) have developed a general framework that warm-starts the *L-convex function minimization* method with predictions, revealing the idea's usefulness for various discrete optimization problems. In this paper, we present a framework for using predictions to accelerate *M-convex function minimization*, thus complementing previous research and extending the range of discrete optimization algorithms that can benefit from predictions. Our framework is particularly effective for an important subclass called *laminar convex minimization*, which appears in many operations research applications. Our methods can improve time complexity bounds upon the best worst-case results by using predictions and even have potential to go beyond a lower-bound result.

Optimization/Discrete and Combinatorial Optimization

Yossi Azar, Debmalya Panigrahi, Noam Touitou

In recent years, there has been an increasing focus on designing online algorithms with (machine-learned) predictions. The ideal learning-augmented algorithm is comparable to the optimum when given perfect predictions (consistency), to the best online approximation for arbitrary predictions (robustness), and should interpolate between these extremes as a smooth function of the prediction error. In this paper, we quantify these guarantees in terms of a general property that we call discrete-smoothness, and achieve discrete-smooth algorithms for online covering, specifically the facility location and set cover problems. For set cover, our work improves the results of Bamas, Maggiori, and Svensson (2020) by augmenting consistency and robustness with smoothness guarantees. For facility location, our work improves on prior work by Almanza et al. (2021) by generalizing to nonuniform costs and also providing smoothness guarantees by augmenting consistency and robustness.

Optimization/Discrete and Combinatorial Optimization

Shiqiang Zhang, Juan Campos, Christian Feldmann, David Walz, Frederik Sandfort, Miriam Mathea, Calvin Tsay, Ruth Misener

Optimization over trained machine learning models has applications including: verification, minimizing neural acquisition functions, and integrating a trained surrogate into a larger decision-making problem. This paper formulates and solves optimization problems constrained by trained graph neural networks (GNNs). To circumvent the symmetry issue caused by graph isomorphism, we propose two types of symmetry-breaking constraints: one indexing a node 0 and one indexing the remaining nodes by lexicographically ordering their neighbor sets. To guarantee that adding these constraints will not remove all symmetric solutions, we construct a graph indexing algorithm and prove that the resulting graph indexing satisfies the proposed symmetry-breaking constraints. For the classical GNN architectures considered in this paper, optimizing over a GNN with a fixed graph is equivalent to optimizing over a dense neural network. Thus, we study the case where the input graph is not fixed, implying that each edge is a decision variable, and develop two mixed-integer optimization formulations. To test our symmetry-breaking strategies and optimization formulations, we consider an application in molecular design.

Optimization/Discrete and Combinatorial Optimization

Fabian Spaeh, Alina Ene

Display Ads and the generalized assignment problem are two well-studied online packing problems with important applications in ad allocation and other areas. In both problems, ad impressions arrive online and have to be allocated immediately to budget-constrained advertisers. Worst-case algorithms that achieve the ideal competitive ratio are known for both problems, but might act overly conservative given the predictable and usually tame nature of real-world input. Given this discrepancy, we develop an algorithm for both problems that incorporate machine-learned predictions and can thus improve the performance beyond the worst-case. Our algorithm is based on the work of Feldman et al. (2009) and similar in nature to Mahdian et al. (2007) who were the first to develop a learning-augmented algorithm for the related, but more structured Ad Words problem. We use a novel analysis to show that our algorithm is able to capitalize on a good prediction, while being robust against poor predictions. We experimentally evaluate our algorithm on synthetic and real-world data on a wide range of predictions. Our algorithm is consistently outperforming the worst-case algorithm without predictions.

Optimization/Discrete and Combinatorial Optimization

Dinghuai Zhang, Hanjun Dai, Nikolay Malkin, Aaron Courville, Yoshua Bengio, Ling Pan

Combinatorial optimization (CO) problems are often NP-hard and thus out of reach for exact algorithms, making them a tempting domain to apply machine learning methods. The highly structured constraints in these problems can hinder either optimization or sampling directly in the solution space.On the other hand, GFlowNets have recently emerged as a powerful machinery to efficiently sample from composite unnormalized densities sequentially and have the potential to amortize such solution-searching processes in CO, as well as generate diverse solution candidates.In this paper, we design Markov decision processes (MDPs) for different combinatorial problems and propose to train conditional GFlowNets to sample from the solution space. Efficient training techniques are also developed to benefit long-range credit assignment.Through extensive experiments on a variety of different CO tasks with synthetic and realistic data, we demonstrate that GFlowNet policies can efficiently find high-quality solutions.Our implementation is open-sourced at https://github.com/zdhNarsil/GFlowNet-CombOpt.

Optimization/Discrete and Combinatorial Optimization

Eric Balkanski, Noemie Perivier, Clifford Stein, Hao-Ting Wei

An important goal of modern scheduling systems is to efficiently manage power usage. In energy-efficient scheduling, the operating system controls the speed at which a machine is processing jobs with the dual objective of minimizing energy consumption and optimizing the quality of service cost of the resulting schedule. Since machine-learned predictions about future requests can often be learned from historical data, a recent line of work on learning-augmented algorithms aims to achieve improved performance guarantees by leveraging predictions. In particular, for energy-efficient scheduling, Bamas et. al. [NeurIPS '20] and Antoniadis et. al. [SWAT '22] designed algorithms with predictions for the energy minimization with deadlines problem and achieved an improved competitive ratio when the prediction error is small while also maintaining worst-case bounds even when the prediction error is arbitrarily large.In this paper, we consider a general setting for energy-efficient scheduling and provide a flexible learning-augmented algorithmic framework that takes as input an offline and an online algorithm for the desired energy-efficient scheduling problem. We show that, when the prediction error is small, this framework gives improved competitive ratios for many different energy-efficient scheduling problems, including energy minimization with deadlines, while also maintaining a bounded competitive ratio regardless of the prediction error. Finally, we empirically demonstrate that this framework achieves an improved performance on real and synthetic datasets.

Optimization/Discrete and Combinatorial Optimization

Yang Li, Jinpei Guo, Runzhong Wang, Junchi Yan

Extensive experiments have gradually revealed the potential performance bottleneck of modeling Combinatorial Optimization (CO) solving as neural solution prediction tasks. The neural networks, in their pursuit of minimizing the average objective score across the distribution of historical problem instances, diverge from the core target of CO of seeking optimal solutions for every test instance. This calls for an effective search on each problem instance, while the model should serve to provide supporting knowledge that benefits the search. To this end, we propose T2T (Training to Testing) framework that first leverages the generative modeling to estimate the high-quality solution distribution for each instance during training, and then conducts a gradient-based search within the solution space during testing. The proposed neural search paradigm consistently leverages generative modeling, specifically diffusion, for graduated solution improvement. It disrupts the local structure of the given solution by introducing noise and reconstructs a lower-cost solution guided by the optimization objective. Experimental results on Traveling Salesman Problem (TSP) and Maximal Independent Set (MIS) show the significant superiority of T2T, demonstrating an average performance gain of 49.15% for TSP solving and 17.27% for MIS solving compared to the previous state-of-the-art.

Optimization/Discrete and Combinatorial Optimization

Zhiqing Sun, Yiming Yang

Neural network-based Combinatorial Optimization (CO) methods have shown promising results in solving various NP-complete (NPC) problems without relying on hand-crafted domain knowledge. This paper broadens the current scope of neural solvers for NPC problems by introducing a new graph-based diffusion framework, namely DIFUSCO. It formulates NPC problems into a discrete {0, 1}-vector space and uses graph-based denoising diffusion models to generate high-quality solutions. Specifically, we explore diffusion models with Gaussian and Bernoulli noise, respectively, and also introduce an effective inference schedule to improve the generation quality. We evaluate our methods on two well-studied combinatorial optimization problems: Traveling Salesman Problem (TSP) and Maximal Independent Set (MIS). Experimental results show that DIFUSCO strongly outperforms the previous state-of-the-art neural solvers, improving the performance gap between ground-truth and neural solvers from 1.76% to 0.46% on TSP-500, from 2.46% to 1.17% on TSP-1000, and from 3.19% to 2.58% on TSP-10000. For the MIS problem, DIFUSCO outperforms the previous state-of-the-art neural solver on the challenging SATLIB benchmark. Our code is available at [this url](https://github.com/Edward-Sun/DIFUSCO).

Optimization/Discrete and Combinatorial Optimization

Lennert De Smet, Emanuele Sansone, Pedro Zuidberg Dos Martires

Categorical random variables can faithfully represent the discrete and uncertain aspects of data as part of a discrete latent variable model. Learning in such models necessitates taking gradients with respect to the parameters of the categorical probability distributions, which is often intractable due to their combinatorial nature. A popular technique to estimate these otherwise intractable gradients is the Log-Derivative trick. This trick forms the basis of the well-known REINFORCE gradient estimator and its many extensions. While the Log-Derivative trick allows us to differentiate through samples drawn from categorical distributions, it does not take into account the discrete nature of the distribution itself. Our first contribution addresses this shortcoming by introducing the CatLog-Derivative trick -- a variation of the Log-Derivative trick tailored towards categorical distributions. Secondly, we use the CatLog-Derivative trick to introduce IndeCateR, a novel and unbiased gradient estimator for the important case of products of independent categorical distributions with provably lower variance than REINFORCE. Thirdly, we empirically show that IndeCateR can be efficiently implemented and that its gradient estimates have significantly lower bias and variance for the same number of samples compared to the state of the art.

Optimization/Discrete and Combinatorial Optimization

Yimeng Min, Yiwei Bai, Carla Gomes

We propose UTSP, an Unsupervised Learning (UL) framework for solving the Travelling Salesman Problem (TSP). We train a Graph Neural Network (GNN) using a surrogate loss. The GNN outputs a heat map representing the probability for each edge to be part of the optimal path. We then apply local search to generate our final prediction based on the heat map. Our loss function consists of two parts: one pushes the model to find the shortest path and the other serves as a surrogate for the constraint that the route should form a Hamiltonian Cycle. Experimental results show that UTSP outperforms the existing data-driven TSP heuristics.Our approach is parameter efficient as well as data efficient: the model takes $\sim$ 10\% of the number of parameters and $\sim$ 0.2\% of training samples compared with Reinforcement Learning or Supervised Learning methods.

Optimization/Discrete and Combinatorial Optimization

Jacobus van der Linden, Mathijs de Weerdt, Emir Demirović

Global optimization of decision trees has shown to be promising in terms of accuracy, size, and consequently human comprehensibility. However, many of the methods used rely on general-purpose solvers for which scalability remains an issue.Dynamic programming methods have been shown to scale much better because they exploit the tree structure by solving subtrees as independent subproblems. However, this only works when an objective can be optimized separately for subtrees.We explore this relationship in detail and show the necessary and sufficient conditions for such separability and generalize previous dynamic programming approaches into a framework that can optimize any combination of separable objectives and constraints.Experiments on five application domains show the general applicability of this framework, while outperforming the scalability of general-purpose solvers by a large margin.

Optimization/Discrete and Combinatorial Optimization

Leonard Papenmeier, Luigi Nardi, Matthias Poloczek

Impactful applications such as materials discovery, hardware design, neural architecture search, or portfolio optimization require optimizing high-dimensional black-box functions with mixed and combinatorial input spaces.While Bayesian optimization has recently made significant progress in solving such problems, an in-depth analysis reveals that the current state-of-the-art methods are not reliable. Their performances degrade substantially when the unknown optima of the function do not have a certain structure. To fill the need for a reliable algorithm for combinatorial and mixed spaces, this paper proposes Bounce that relies on a novel map of various variable types into nested embeddings of increasing dimensionality.Comprehensive experiments show that Bounce reliably achieves and often even improves upon state-of-the-art performance on a variety of high-dimensional problems.

Optimization/Discrete and Combinatorial Optimization

Yuxin Pan, Yize Chen, Fangzhen Lin

Designing effective policies for the online 3D bin packing problem (3D-BPP) has been a long-standing challenge, primarily due to the unpredictable nature of incoming box sequences and stringent physical constraints. While current deep reinforcement learning (DRL) methods for online 3D-BPP have shown promising results in optimizing average performance over an underlying box sequence distribution, they often fail in real-world settings where some worst-case scenarios can materialize. Standard robust DRL algorithms tend to overly prioritize optimizing the worst-case performance at the expense of performance under normal problem instance distribution. To address these issues, we first introduce a permutation-based attacker to investigate the practical robustness of both DRL-based and heuristic methods proposed for solving online 3D-BPP. Then, we propose an adjustable robust reinforcement learning (AR2L) framework that allows efficient adjustment of robustness weights to achieve the desired balance of the policy's performance in average and worst-case environments. Specifically, we formulate the objective function as a weighted sum of expected and worst-case returns, and derive the lower performance bound by relating to the return under a mixture dynamics. To realize this lower bound, we adopt an iterative procedure that searches for the associated mixture dynamics and improves the corresponding policy. We integrate this procedure into two popular robust adversarial algorithms to develop the exact and approximate AR2L algorithms. Experiments demonstrate that AR2L is versatile in the sense that it improves policy robustness while maintaining an acceptable level of performance for the nominal case.

Optimization/Discrete and Combinatorial Optimization

Haoran Ye, Jiarui Wang, Zhiguang Cao, Helan Liang, Yong Li

Ant Colony Optimization (ACO) is a meta-heuristic algorithm that has been successfully applied to various Combinatorial Optimization Problems (COPs). Traditionally, customizing ACO for a specific problem requires the expert design of knowledge-driven heuristics. In this paper, we propose DeepACO, a generic framework that leverages deep reinforcement learning to automate heuristic designs. DeepACO serves to strengthen the heuristic measures of existing ACO algorithms and dispense with laborious manual design in future ACO applications. As a neural-enhanced meta-heuristic, DeepACO consistently outperforms its ACO counterparts on eight COPs using a single neural model and a single set of hyperparameters. As a Neural Combinatorial Optimization method, DeepACO performs better than or on par with problem-specific methods on canonical routing problems. Our code is publicly available at https://github.com/henry-yeh/DeepACO.

Optimization/Discrete and Combinatorial Optimization

Seunghun Lee, Jaewon Chu, Sihyeon Kim, Juyeon Ko, Hyunwoo Kim

Bayesian optimization is a powerful method for optimizing black-box functions with limited function evaluations. Recent works have shown that optimization in a latent space through deep generative models such as variational autoencoders leads to effective and efficient Bayesian optimization for structured or discrete data. However, as the optimization does not take place in the input space, it leads to an inherent gap that results in potentially suboptimal solutions. To alleviate the discrepancy, we propose Correlated latent space Bayesian Optimization (CoBO), which focuses on learning correlated latent spaces characterized by a strong correlation between the distances in the latent space and the distances within the objective function. Specifically, our method introduces Lipschitz regularization, loss weighting, and trust region recoordination to minimize the inherent gap around the promising areas. We demonstrate the effectiveness of our approach on several optimization tasks in discrete data, such as molecule design and arithmetic expression fitting, and achieve high performance within a small budget.

Optimization/Discrete and Combinatorial Optimization

Sebastian Sanokowski, Wilhelm Berghammer, Sepp Hochreiter, Sebastian Lehner

Several recent unsupervised learning methods use probabilistic approaches to solve combinatorial optimization (CO) problems based on the assumption of statistically independent solution variables. We demonstrate that this assumption imposes performance limitations in particular on difficult problem instances. Our results corroborate that an autoregressive approach which captures statistical dependencies among solution variables yields superior performance on many popular CO problems. We introduce Subgraph Tokenization in which the configuration of a set of solution variables is represented by a single token. This tokenization technique alleviates the drawback of the long sequential sampling procedure which is inherent to autoregressive methods without sacrificing expressivity. Importantly, we theoretically motivate an annealed entropy regularization and show empirically that it is essential for efficient and stable learning.

Optimization/Discrete and Combinatorial Optimization

Xingchen Wan, Pierre Osselin, Henry Kenlay, Binxin Ru, Michael A Osborne, Xiaowen Dong

The increasing availability of graph-structured data motivates the task of optimising over functions defined on the node set of graphs. Traditional graph search algorithms can be applied in this case, but they may be sample-inefficient and do not make use of information about the function values; on the other hand, Bayesian optimisation is a class of promising black-box solvers with superior sample efficiency, but it has scarcely been applied to such novel setups. To fill this gap, we propose a novel Bayesian optimisation framework that optimises over functions defined on generic, large-scale and potentially unknown graphs. Through the learning of suitable kernels on graphs, our framework has the advantage of adapting to the behaviour of the target function. The local modelling approach further guarantees the efficiency of our method. Extensive experiments on both synthetic and real-world graphs demonstrate the effectiveness of the proposed optimisation framework.