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Applications · Robotics

Huang Huang, Fangchen Liu, Letian Fu, Tingfan Wu, Mustafa Mukadam, Jitendra Malik, Ken Goldberg, Pieter Abbeel

Vision-Language-Action (VLA) models aim to predict robotic actions based on visual observations and language instructions. Existing approaches require fine-tuning pre-trained vision-language models (VLMs) as visual and language features are independently fed into downstream policies, degrading the pre-trained semantic alignments. We propose OTTER, a novel VLA architecture that leverages these existing alignments through explicit, text-aware visual feature extraction. Instead of processing all visual features, OTTER selectively extracts and passes only task-relevant visual features that are semantically aligned with the language instruction to the policy transformer. This allows OTTER to keep the pre-trained vision-language encoders frozen. Thereby, OTTER preserves and utilizes the rich semantic understanding learned from large-scale pre-training, enabling strong zero-shot generalization capabilities. In simulation and real-world experiments, OTTER significantly outperforms existing VLA models, demonstrating strong zero-shot generalization to novel objects and environments. Video, code, checkpoints, and dataset: https://ottervla.github.io/.

Optimization · Stochastic

Haihan Zhang, Weicheng Lin, Yuanshi Liu, Cong Fang

This paper considers a canonical problem in kernel regression: how good are the model performances when it is trained by the popular online first-order algorithms, compared to the offline ones, such as ridge and ridgeless regression? In this paper, we analyze the foundational single-pass Stochastic Gradient Descent (SGD) in kernel regression under source condition where the optimal predictor can even not belong to the RKHS, i.e. the model is misspecified. Specifically, we focus on the inner product kernel over the sphere and characterize the exact orders of the excess risk curves under different scales of sample sizes $n$ concerning the input dimension $d$. Surprisingly, we show that SGD achieves min-max optimal rates up to constants among all the scales, $without$ suffering the saturation, a prevalent phenomenon observed in (ridge) regression, except when the model is highly misspecified and the learning is in a final stage where $n\gg d^\gamma$ with any constant $\gamma >0$. The main reason for SGD to overcome the curse of saturation is the exponentially decaying step size schedule, a common practice in deep neural network training. As a byproduct, we provide the $first$ provable advantage of the scheme over the iterative averaging method in the common setting.

Probabilistic Methods · Gaussian Processes

Henry Moss, Sebastian Ober, Tom Diethe

Bayesian optimisation in the latent space of a VAE is a powerful framework for optimisation tasks over complex structured domains, such as the space of valid molecules. However, existing approaches tightly couple the surrogate and generative models, which can lead to suboptimal performance when the latent space is not tailored to specific tasks, which in turn has led to the proposal of increasingly sophisticated algorithms. In this work, we explore a new direction, instead proposing a decoupled approach that trains a generative model and a GP surrogate separately, then combines them via a simple yet principled Bayesian update rule. This separation allows each component to focus on its strengths— structure generation from the VAE and predictive modelling by the GP. We show that our decoupled approach improves our ability to identify high-potential candidates in molecular optimisation problems under constrained evaluation budgets.

Applications · Chemistry, Physics, and Earth Sciences

Cailong Hua, Sivaraman Rajaganapathy, Rebecca Slick, Joseph Vavra, Joseph Muretta, James Ervasti, Murti Salapaka

Deciphering protein folding and unfolding pathways under tension is essential for deepening our understanding of fundamental biological mechanisms. Such insights hold the promise of developing treatments for a range of debilitating and fatal conditions, including muscular disorders like Duchenne Muscular Dystrophy and neurodegenerative diseases such as Parkinson's disease. Single molecule force spectroscopy (SMFS) is a powerful technique for investigating forces involved in protein domains folding and unfolding. However, SMFS trials often involve multiple protein molecules, necessitating filtering to isolate measurements from single-molecule trials. Currently, manual visual inspection is the primary method for classifying single-molecule data; a process that is both time-consuming and requires significant expertise. Here, we both apply state-of-the-art machine learning models and present a novel deep learning model tailored to SMFS data. The proposed model employs a dual-branch fusion strategy; one branch integrates the physics of protein molecules, and the other operates independently of physical constraints. This model automates the isolation of single-molecule measurements, significantly enhancing data processing efficiency. To train and validate our approach, we developed a physics-based Monte Carlo engine to simulate force spectroscopy datasets, including trials involving single molecules, multiple molecules, and no molecules. Our model achieves state-of-the-art performance, outperforming five baseline methods on both simulated and experimental datasets. It attains nearly 100\% accuracy across all simulated datasets and an average accuracy of $79.6 \pm 5.2$\% on experimental datasets, using only $\sim$30 training samples, surpassing baseline methods by 11.4\%. Notably, even without expert annotations on experimental data, the model achieves an average accuracy of $72.0 \pm 5.9$\% when pre-trained on corresponding simulated datasets. With our deep learning approach, the time required to extract meaningful statistics from single-molecule SMFS trials is reduced from a day to under an hour. This work results in SMFS experimental datasets from four important protein molecules crucial to many biological pathways. To support further research, we have made our datasets publicly available and provided a Python-based toolbox (https://github.com/SalapakaLab-SIMBioSys/SMFS-Identification).

General Machine Learning · Causality

Jingyuan Wang, Zhimei Ren, Ruohan Zhan, Zhengyuan Zhou

Distributionally robust policy learning aims to find a policy that performs well under the worst-case distributional shift, and yet most existing methods for robust policy learning consider the worst-case *joint* distribution of the covariate and the outcome. The joint-modeling strategy can be unnecessarily conservative when we have more information on the source of distributional shifts. This paper studies a more nuanced problem --- robust policy learning under the *concept drift*, when only the conditional relationship between the outcome and the covariate changes. To this end, we first provide a doubly-robust estimator for evaluating the worst-case average reward of a given policy under a set of perturbed conditional distributions. We show that the policy value estimator enjoys asymptotic normality even if the nuisance parameters are estimated with a slower-than-root-$n$ rate. We then propose a learning algorithm that outputs the policy maximizing the estimated policy value within a given policy class $\Pi$, and show that the sub-optimality gap of the proposed algorithm is of the order $\kappa(\Pi)n^{-1/2}$, where $\kappa(\Pi)$ is the entropy integral of $\Pi$ under the Hamming distance and $n$ is the sample size. A matching lower bound is provided to show the optimality of the rate. The proposed methods are implemented and evaluated in numerical studies, demonstrating substantial improvement compared with existing benchmarks.

Deep Learning · Large Language Models

Mingkang Zhu, Xi Chen, Zhongdao Wang, Bei Yu, Hengshuang Zhao, Jiaya Jia

Recent advancements in reinforcement learning from human feedback have shown that utilizing fine-grained token-level reward models can substantially enhance the performance of Proximal Policy Optimization (PPO) in aligning large language models. However, it is challenging to leverage such token-level reward as guidance for Direct Preference Optimization (DPO), since DPO is formulated as a sequence-level bandit problem. To address this challenge, this work decomposes the sequence-level PPO into a sequence of token-level proximal policy optimization problems and then frames the problem of token-level PPO with token-level reward guidance, from which closed-form optimal token-level policy and the corresponding token-level reward can be derived. Using the obtained reward and Bradley-Terry model, this work establishes a framework of computable loss functions with token-level reward guidance for DPO, and proposes a practical reward guidance based on the induced DPO reward. This formulation enables different tokens to exhibit varying degrees of deviation from reference policy based on their respective rewards. Experiment results demonstrate that our method achieves substantial performance improvements over DPO, with win rate gains of up to 7.5 points on MT-Bench, 6.2 points on AlpacaEval 2, and 4.3 points on Arena-Hard. Code is available at https://github.com/dvlab-research/TGDPO.

Theory · Online Learning and Bandits

Suho Shin, Chenghao Yang, Haifeng Xu, MohammadTaghi Hajiaghayi

We introduce the tokenized linear bandit (TLB) and multi-armed bandit (TMAB), variants of linear and stochastic multi-armed bandit problems inspired by LLM decoding and alignment. In these problems, at each round $t \in [T]$, a user submits a query (context), and the decision maker (DM) sequentially selects a token irrevocably from a token set. Once the sequence is complete, the DM observes a random utility from the user, whose expectation is presented by a sequence function mapping the chosen token sequence to a nonnegative real value that depends on the query.In both problems, we first show that learning is impossible without any structure on the sequence function.We introduce a natural assumption, diminishing distance with more commons (DDMC), and propose algorithms with regret $\tilde{O}(L\sqrt{T})$ and $\tilde{O}(L\sqrt{T^{2/3}})$ for TLB and TMAB, respectively.As a side product, we obtain an (almost) optimality of the greedy decoding for LLM decoding algorithm under DDMC, which justifies the unresaonable effectiveness of greedy decoding in several tasks.This also has an immediate application to decoding-time LLM alignment, when the misaligned utility can be represented as the frozen LLM's utility and a linearly realizable latent function.We finally validate our algorithm's performance empirically as well as verify our assumptions using synthetic and real-world datasets.

Reinforcement Learning · Multi-agent

Xianghua Zeng, Hang Su, Zhengyi Wang, Zhiyuan LIN

Offline multi-agent reinforcement learning (MARL) struggles to estimate out-of-distribution states and actions due to the absence of real-time environmental feedback. While diffusion models show promise in addressing these challenges, their application primarily focuses on independently diffusing the historical trajectories of individual agents, neglecting crucial multi-agent coordination dynamics and reducing policy robustness in dynamic environments. In this paper, we propose MCGD, a novel Multi-agent Coordination framework based on Graph Diffusion models to improve the effectiveness and robustness of collaborative policies. Specifically, we begin by constructing a sparse coordination graph that includes continuous node attributes and discrete edge attributes to effectively identify the underlying dynamics of multi-agent interactions. Next, we derive transition probabilities between edge categories and present adaptive categorical diffusion to capture the structure diversity of multi-agent coordination. Leveraging this coordination structure, we define neighbor-dependent forward noise and develop anisotropic diffusion to enhance the action diversity of each agent. Extensive experiments across various multi-agent environments demonstrate that MCGD significantly outperforms existing state-of-the-art baselines in coordination performance and policy robustness in dynamic environments.

Applications · Robotics

Manan Tayal, Aditya Singh, Shishir Nadubettu Yadukumar, Somil Bansal

As autonomous systems become more ubiquitous in daily life, ensuring high performance with guaranteed safety is crucial. However, safety and performance could be competing objectives, which makes their co-optimization difficult. Learning-based methods, such as Constrained Reinforcement Learning (CRL), achieve strong performance but lack formal safety guarantees due to safety being enforced as soft constraints, limiting their use in safety-critical settings. Conversely, formal methods such as Hamilton-Jacobi (HJ) Reachability Analysis and Control Barrier Functions (CBFs) provide rigorous safety assurances but often neglect performance, resulting in overly conservative controllers. To bridge this gap, we formulate the co-optimization of safety and performance as a state-constrained optimal control problem, where performance objectives are encoded via a cost function and safety requirements are imposed as state constraints. We demonstrate that the resultant value function satisfies a Hamilton-Jacobi-Bellman (HJB) equation, which we approximate efficiently using a novel physics-informed machine learning framework. In addition, we introduce a conformal prediction-based verification strategy to quantify the learning errors, recovering a high-confidence safety value function, along with a probabilistic error bound on performance degradation. Through several case studies, we demonstrate the efficacy of the proposed framework in enabling scalable learning of safe and performant controllers for complex, high-dimensional autonomous systems.

Deep Learning · Graph Neural Networks

Qunzhong WANG, Xiangguo Sun, Hong Cheng

In recent years, graph prompting has emerged as a promising research direction, enabling the learning of additional tokens or subgraphs appended to original graphs without requiring retraining of pre-trained graph models across various applications. This novel paradigm, shifting from the traditional "pre-training and fine-tuning" to "pre-training and prompting," has shown significant empirical success in simulating graph data operations, with applications ranging from recommendation systems to biological networks and graph transferring. However, despite its potential, the theoretical underpinnings of graph prompting remain underexplored, raising critical questions about its fundamental effectiveness. The lack of rigorous theoretical proof of why and how much it works is more like a "dark cloud" over the graph prompting area for deeper research. To fill this gap, this paper introduces a theoretical framework that rigorously analyzes graph prompting from a data operation perspective. Our contributions are threefold: **First**, we provide a formal guarantee theorem, demonstrating graph prompts’ capacity to approximate graph transformation operators, effectively linking upstream and downstream tasks. **Second**, we derive upper bounds on the error of these data operations for a single graph and extend this discussion to batches of graphs, which are common in graph model training. **Third**, we analyze the distribution of data operation errors, extending our theoretical findings from linear graph models (e.g., GCN) to non-linear graph models (e.g., GAT). Extensive experiments support our theoretical results and confirm the practical implications of these guarantees.

Deep Learning · Large Language Models

Xize Liang, Lin Yang, Jie Wang, Yiyang Lu, Runyu Wu, Hanzhu Chen, Jianye Hao

The multi-domain fine-tuning of large language models (LLMs) confronts a notorious trade-off among abilities across domains. Existing studies attribute this trade-off to the conflicts between samples rooted in inherent semantics. Recent approaches attempt to mitigate these conflicts through the empirical investigation or heuristic strategies. However, without a fundamental understanding of interactions between samples, they yield only marginal improvements, while incurring substantial trial-and-error costs. To address this challenge, we move beyond empirical studies by modeling interactions between samples as their influence on each other's loss, estimated using gradients. Intriguingly, we find that these interactions **evolve throughout training** rather than being purely determined by inherent semantics. Building on this insight, we propose **EV**olving **I**nteraction-guided **C**urriculum (**EVIC**), which iteratively selects samples that positively influence the overall dataset for training. By dynamically adapting the training curriculum to prioritize samples that contribute the most to the model training, EVIC effectively mitigates conflicts and improves the sample efficiency. Extensive experiments on a mixed dataset covering coding, math, and general tasks with several model architectures show that EVIC significantly outperforms all baselines across diverse capabilities.

Social Aspects · Privacy

Lucas Rosenblatt, Yuliia Lut, Ethan Turok, Marco Medina, Rachel Cummings

Imbalanced learning occurs in classification settings where the distribution of class-labels is highly skewed in the training data, such as when predicting rare diseases or in fraud detection. This class imbalance presents a significant algorithmic challenge, which can be further exacerbated when privacy-preserving techniques such as differential privacy are applied to protect sensitive training data. Our work formalizes these challenges and provides a number of algorithmic solutions. We consider DP variants of pre-processing methods that privately augment the original dataset to reduce the class imbalance, alongside DP variants of in-processing techniques, which adjust the learning algorithm to account for the imbalance. For each method, we either adapt an existing imbalanced learning technique to the private setting or demonstrate its incompatibility with differential privacy. Finally, we empirically evaluate these privacy-preserving imbalanced learning methods under various data and distributional settings. We find that private synthetic data methods perform well as a data pre-processing step, while class-weighted ERMs are an alternative in higher-dimensional settings where private synthetic data suffers from the curse of dimensionality.

Deep Learning · Foundation Models

Chenghao Fan, zhenyi lu, Sichen Liu, Chengfeng Gu, Xiaoye Qu, Wei Wei, Yu Cheng

While Low-Rank Adaptation (LoRA) enables parameter-efficient fine-tuning for Large Language Models (LLMs), its performance often falls short of Full Fine-Tuning (Full FT). Current methods optimize LoRA by initializing with static singularvalue decomposition (SVD) subsets, leading to suboptimal leveraging of pre-trained knowledge. {Another path for improving LoRA is incorporating a Mixture-of-Experts (MoE) architecture.}{However, weight misalignment and complex gradient dynamics make it challenging to adopt SVD prior to the LoRA MoE architecture.} To mitigate these issues, we propose \underline{G}reat L\underline{o}R\underline{A} Mixture-of-Exper\underline{t} (GOAT), a framework that (1) adaptively integrates relevant priors using an SVD-structured MoE, and (2) aligns optimization with full fine-tuned MoE by deriving a theoretical scaling factor. We demonstrate that proper scaling, without modifying the architecture or training algorithms, boosts LoRA MoE’s efficiency and performance. Experiments across 25 datasets, including natural language understanding, commonsense reasoning, image classification, and natural language generation, demonstrate GOAT’s state-of-the-art performance, closing the gap with Full FT. Our code is available at: https://github.com/Facico/GOAT-PEFT

General Machine Learning · Representation Learning

Yifan Wang, Hourun Li, Ling Yue, Zhiping Xiao, Jia Yang, Changling Zhou, Wei Ju, Ming Zhang, Xiao Luo

Graph neural networks (GNNs) have shown strong performance in graph fairness learning, which aims to ensure that predictions are unbiased with respect to sensitive attributes. However, existing approaches usually assume that training and test data share the same distribution, which rarely holds in the real world. To tackle this challenge, we propose a novel approach named Dual Unbiased Expansion with Group-acquired Alignment (DANCE) for graph fairness learning under distribution shifts. The core idea of our DANCE is to synthesize challenging yet unbiased virtual graph data in both graph and hidden spaces, simulating distribution shifts from a data-centric view. Specifically, we introduce the unbiased Mixup in the hidden space, prioritizing minor groups to address the potential imbalance of sensitive attributes. Simultaneously, we conduct fairness-aware adversarial learning in the graph space to focus on challenging samples and improve model robustness. To further bridge the domain gap, we propose a group-acquired alignment objective that prioritizes negative pair groups with identical sensitive labels. Additionally, a representation disentanglement objective is adopted to decorrelate sensitive attributes and target representations for enhanced fairness. Extensive experiments demonstrate the superior effectiveness of the proposed DANCE.

Applications · Health / Medicine

Maynara de Souza, Cleber Zanchettin

Data scarcity and quality issues remain significant barriers to developing robust predictive models in medical research. Traditional reliance on real-world data often leads to biased models with poor generalizability across diverse patient populations. Synthetic data generation has emerged as a promising solution, yet challenges related to these sample's representativeness and effective utilization persist. This paper introduces Profile2Gen, a novel data-centric framework designed to guide the generation and refinement of synthetic data, focusing on addressing hard-to-learn samples in regression tasks. We conducted approximately 18,000 experiments to validate its effectiveness across six medical datasets, utilizing seven state-of-the-art generative models. Results demonstrate that refined synthetic samples can reduce predictive errors and enhance model reliability. Additionally, we generalize the DataIQ framework to support regression tasks, enabling its application in broader contexts. Statistical analyses confirm that our approach achieves equal or superior performance compared to models trained exclusively on real data.

Theory · Game Theory

Boaz Taitler, Omer Ben-Porat

The rise of Generative AI (GenAI) has significantly impacted human-based forums like Stack Overflow, which are essential for generating high-quality data. This creates a negative feedback loop, hindering the development of GenAI systems, which rely on such data to provide accurate responses. In this paper, we provide a possible remedy: A novel strategy we call selective response. Selective response implies that GenAI could strategically provide inaccurate (or conservative) responses to queries involving emerging topics and novel technologies, thereby driving users to use human-based forums. We show that selective response can potentially have a compounding effect on the data generation process, increasing both GenAI's revenue and user welfare in the long term. From an algorithmic perspective, we propose an approximately optimal approach to maximize GenAI's revenue under social welfare constraints. From a regulatory perspective, we derive sufficient and necessary conditions for selective response to improve welfare.

Deep Learning · Large Language Models

Daniil Laptev, Nikita Balagansky, Yaroslav Aksenov, Daniil Gavrilov

We introduce a new approach to systematically map features discovered by sparse autoencoder across consecutive layers of large language models, extending earlier work that examined inter-layer feature links. By using a data-free cosine similarity technique, we trace how specific features persist, transform, or first appear at each stage. This method yields granular flow graphs of feature evolution, enabling fine-grained interpretability and mechanistic insights into model computations. Crucially, we demonstrate how these cross-layer feature maps facilitate direct steering of model behavior by amplifying or suppressing chosen features, achieving targeted thematic control in text generation. Together, our findings highlight the utility of a causal, cross-layer interpretability framework that not only clarifies how features develop through forward passes but also provides new means for transparent manipulation of large language models.

Applications · Robotics

Xin Huang, Eric M. Wolff, Paul Vernaza, Tung Phan-Minh, Hongge Chen, David Hayden, Mark Edmonds, Brian Pierce, Xinxin Chen, Pratik Elias Jacob 等

We present DriveGPT, a scalable behavior model for autonomous driving. We model driving as a sequential decision-making task, and learn a transformer model to predict future agent states as tokens in an autoregressive fashion. We scale up our model parameters and training data by multiple orders of magnitude, enabling us to explore the scaling properties in terms of dataset size, model parameters, and compute. We evaluate DriveGPT across different scales in a planning task, through both quantitative metrics and qualitative examples, including closed-loop driving in complex real-world scenarios. In a separate prediction task, DriveGPT outperforms state-of-the-art baselines and exhibits improved performance by pretraining on a large-scale dataset, further validating the benefits of data scaling.

Deep Learning · Large Language Models

Yuqi Luo, Chenyang Song, Xu Han, Yingfa Chen, Chaojun Xiao, Xiaojun Meng, Liqun Deng, Jiansheng Wei, Zhiyuan Liu, Maosong Sun

Activation sparsity denotes the existence of substantial weakly-contributed neurons within feed-forward networks of large language models (LLMs), providing wide potential benefits such as computation acceleration. However, existing works lack thorough quantitative studies on this useful property, in terms of both its measurement and influential factors. In this paper, we address three underexplored research questions: (1) How can activation sparsity be measured more accurately? (2) How is activation sparsity affected by the model architecture and training process? (3) How can we build a more sparsely activated and efficient LLM? Specifically, we develop a generalizable and performance-friendly metric, named CETT-PPL-1\%, to measure activation sparsity. Based on CETT-PPL-1\%, we quantitatively study the influence of various factors and observe several important phenomena, such as the convergent power-law relationship between sparsity and training data amount, the higher competence of ReLU activation than mainstream SiLU activation, the potential sparsity merit of a small width-depth ratio, and the scale insensitivity of activation sparsity. Finally, we provide implications for building sparse and effective LLMs, and demonstrate the reliability of our findings by training a 2.4B model with a sparsity ratio of 93.52\%, showing 4.1$\times$ speedup compared with its dense version. The codes and checkpoints are available at https://github.com/thunlp/SparsingLaw/.

Social Aspects · Accountability, Transparency, and Interpretability

Hantao Lou, Changye Li, Jiaming Ji, Yaodong Yang

With the integration of image modality, the semantic space of multimodal large language models (MLLMs) is more complex than text-only models, making their interpretability more challenging and their alignment less stable, particularly susceptible to low-quality data, which can lead to inconsistencies between modalities, hallucinations, and biased outputs. As a result, developing interpretability methods for MLLMs is crucial for improving alignment quality and efficiency. In text-only LLMs, Sparse Autoencoders (SAEs) have gained attention for their ability to interpret latent representations. However, extending SAEs to multimodal settings presents new challenges due to modality fusion and the difficulty of isolating cross-modal representations. To address these challenges, we introduce SAE-V, a mechanistic interpretability framework that extends the SAE paradigm to MLLMs. By identifying and analyzing interpretable features along with their corresponding data, SAE-V enables fine-grained interpretation of both model behavior and data quality, facilitating a deeper understanding of cross-modal interactions and alignment dynamics. Moreover, by utilizing cross-modal feature weighting, SAE-V provides an intrinsic data filtering mechanism to enhance model alignment without requiring additional models. Specifically, when applied to the alignment process of MLLMs, SAE-V-based data filtering methods could achieve more than 110% performance with less than 50% data. Our results highlight SAE-V’s ability to enhance interpretability and alignment in MLLMs, providing insights into their internal mechanisms.